Os11g0579600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0579600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.25 | 0.263 | 9.33 | 0.464 | 0.203 | 1.5 | -0.545 | 0.0854 | 0.0524 | 4.09 | 9.469 | 589 | -- | -- |
| 31.26 | 0.26 | 9.33 | 0.45 | 0.204 | 1.51 | -0.56 | -- | 0.0493 | 4.13 | 9.894 | 589 | -- | -- |
| 31.83 | 0.263 | 9.32 | 0.514 | 0.307 | 1.53 | -- | 0.297 | 0.0654 | 2.87 | 8.799 | 466 | -- | -- |
| 31.87 | 0.263 | 9.33 | 0.475 | 0.349 | 1.54 | -- | -- | 0.0537 | 2.56 | 10.04 | 416 | -- | -- |
| 33.05 | 0.268 | 9.32 | 0.484 | -- | 1.42 | -- | 0.158 | 0.069 | -- | 4.45 | 724 | -- | -- |
| 57.5 | 0.355 | 9.29 | 0.83 | 0.343 | -- | 0.441 | -- | 0.28 | 20.9 | -- | -- | -- | -- |
| 58.05 | 0.357 | 9.29 | 0.813 | 0.341 | -- | -- | -- | 0.279 | 21.5 | -- | -- | -- | -- |
| 33.07 | 0.268 | 9.33 | 0.456 | -- | 1.42 | -- | -- | 0.0614 | -- | 6.02 | 724 | -- | -- |
| 37 | 0.283 | 9.35 | -- | 0.246 | 1.72 | -- | -- | -0.0289 | 4.09 | 14.17 | 586 | -- | -- |
| 64.86 | 0.376 | 9.28 | 0.815 | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
| 75.45 | 0.406 | 9.31 | -- | 0.342 | -- | -- | -- | 0.188 | 21.6 | -- | -- | -- | -- |
| 37.95 | 0.287 | 9.34 | -- | -- | 1.59 | -- | -- | -0.0112 | -- | 14.11 | 754 | -- | -- |
| 82.37 | 0.424 | 9.3 | -- | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 5 | 31.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 9 | 31.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 10 | 31.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 12 | 31.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 20 | 31.51 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 34 | 31.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 66 | 32.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 71 | 32.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 122 | 32.42 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 158 | 32.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 364 | 33.82 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 369 | 33.83 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 373 | 33.84 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 383 | 33.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 384 | 33.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 390 | 33.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 401 | 33.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 10 |
| 410 | 33.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 14 |
| 415 | 33.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 416 | 33.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 692 | 34.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 810 | 34.29 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |