Os11g0593600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0593600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.02 | 0.274 | 2.9 | -0.189 | 0.0947 | 2 | -0.189 | -5.27 | -0.0749 | 6.69 | 66.76 | 674 | 5.7 | 2.97 |
| 35.98 | 0.279 | 2.9 | -0.148 | 0.0904 | 3.39 | -0.174 | -- | -0.0764 | 6.32 | 70.8 | 1661 | 3.08 | 3.57 |
| 34.1 | 0.272 | 2.9 | -0.189 | 0.0945 | 2 | -- | -5.35 | -0.0728 | 7.2 | 66.87 | 676 | 5.72 | 2.97 |
| 36.02 | 0.28 | 2.9 | -0.15 | 0.0914 | 3.41 | -- | -- | -0.0738 | 7.38 | 70.04 | 1536 | 3.99 | 2.72 |
| 34.57 | 0.274 | 2.9 | -0.189 | -- | 2.03 | -- | -5.36 | -0.0718 | -- | 66.69 | 845 | 5.68 | 2.98 |
| 57.57 | 0.356 | 2.9 | -0.259 | 0.146 | -- | -0.603 | -- | -0.108 | 7.35 | -- | -- | -- | -- |
| 58.54 | 0.358 | 2.9 | -0.272 | 0.145 | -- | -- | -- | -0.107 | 7.79 | -- | -- | -- | -- |
| 36.46 | 0.281 | 2.9 | -0.147 | -- | 3.45 | -- | -- | -0.072 | -- | 70.16 | 1458 | 4.12 | 2.89 |
| 36.6 | 0.282 | 2.89 | -- | 0.089 | 3.48 | -- | -- | -0.0568 | 7.47 | 70.3 | 1471 | 4.1 | 2.99 |
| 59.68 | 0.361 | 2.91 | -0.27 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 60.49 | 0.364 | 2.89 | -- | 0.143 | -- | -- | -- | -0.0767 | 7.92 | -- | -- | -- | -- |
| 37.02 | 0.283 | 2.89 | -- | -- | 3.52 | -- | -- | -0.0553 | -- | 70.2 | 1377 | 4.15 | 3.17 |
| 61.61 | 0.366 | 2.9 | -- | -- | -- | -- | -- | -0.075 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.77 | humidity | 70 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 37 | 35.10 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 63 | 35.62 | humidity | 70 | 270 | < th | dose independent | rect. | 6 | 3 |
| 80 | 35.96 | humidity | 70 | 720 | < th | dose independent | rect. | 7 | 1 |
| 153 | 35.97 | radiation | 20 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 170 | 35.98 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 304 | 36.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 305 | 36.12 | radiation | 20 | 270 | > th | dose independent | rect. | 6 | 1 |
| 324 | 36.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 10 |
| 325 | 36.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 20 | 12 |
| 477 | 38.39 | radiation | 30 | 10 | > th | dose dependent | rect. | 7 | 3 |
| 663 | 39.55 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 690 | 39.55 | humidity | 60 | 30 | < th | dose independent | rect. | 18 | 17 |
| 693 | 39.55 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 922 | 39.63 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 928 | 39.67 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 4 |