Os11g0593500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0593500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.16 | 0.587 | 2.91 | 0.151 | 0.151 | -2.85 | -0.434 | 7.1 | 0.229 | 7.56 | 1015 | 1443 | 6.02 | 5.26 |
| 168.81 | 0.605 | 2.91 | 0.1 | 0.193 | -2.6 | -0.469 | -- | 0.234 | 7.8 | 1015 | 1447 | 6.13 | 5.27 |
| 156.67 | 0.583 | 2.91 | 0.141 | 0.144 | -2.83 | -- | 7.14 | 0.228 | 7.55 | 1015 | 1443 | 6.01 | 5.35 |
| 169.4 | 0.606 | 2.9 | 0.0879 | 0.192 | -2.6 | -- | -- | 0.229 | 7.7 | 1015 | 1447 | 5.98 | 5.45 |
| 157.49 | 0.584 | 2.91 | 0.143 | -- | -2.78 | -- | 7.17 | 0.221 | -- | 1015 | 1442 | 6.07 | 5.62 |
| 182.93 | 0.634 | 2.92 | 0.105 | 0.0907 | -- | -0.398 | -- | 0.179 | 7.98 | -- | -- | -- | -- |
| 183.39 | 0.634 | 2.92 | 0.094 | 0.0921 | -- | -- | -- | 0.18 | 7.62 | -- | -- | -- | -- |
| 170.83 | 0.609 | 2.91 | 0.0918 | -- | -2.58 | -- | -- | 0.217 | -- | 1015 | 1444 | 6.06 | 5.63 |
| 169.6 | 0.607 | 2.9 | -- | 0.207 | -2.59 | -- | -- | 0.223 | 7.8 | 1015 | 1448 | 5.98 | 5.47 |
| 183.85 | 0.634 | 2.92 | 0.0953 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 183.63 | 0.634 | 2.92 | -- | 0.0929 | -- | -- | -- | 0.169 | 7.55 | -- | -- | -- | -- |
| 171.05 | 0.609 | 2.91 | -- | -- | -2.57 | -- | -- | 0.208 | -- | 1015 | 1444 | 6.03 | 5.62 |
| 184.09 | 0.633 | 2.92 | -- | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.14 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 4 | 157.25 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 7 | 157.43 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 11 | 157.49 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 16 | 157.68 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 31 | 157.68 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 48 | 163.99 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 58 | 163.99 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 74 | 165.53 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 1 |
| 77 | 165.53 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 80 | 165.93 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 85 | 166.14 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 87 | 166.18 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 128 | 168.76 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 2 |
| 137 | 169.61 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 192 | 171.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 196 | 171.19 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 199 | 171.19 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 221 | 171.59 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 230 | 171.66 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 238 | 171.79 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 239 | 171.81 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 243 | 171.96 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 259 | 172.09 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 266 | 172.19 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 12 | 3 |
| 267 | 172.27 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 274 | 172.31 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 278 | 172.45 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 280 | 172.45 | humidity | 80.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 281 | 172.45 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 3 |
| 283 | 172.46 | radiation | 40.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 285 | 172.46 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 290 | 172.49 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 291 | 172.49 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 296 | 172.50 | radiation | 20.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 299 | 172.52 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 305 | 172.54 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 307 | 172.54 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 309 | 172.54 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 311 | 172.54 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 312 | 172.54 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 313 | 172.54 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 338 | 172.72 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 384 | 173.27 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 393 | 173.45 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 395 | 173.46 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 406 | 173.48 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 24 | 9 |
| 412 | 173.49 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 413 | 173.49 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 468 | 173.54 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 478 | 173.66 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 528 | 174.27 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 544 | 174.48 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 604 | 174.83 | wind | 1.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 653 | 175.09 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 0 | NA |
| 680 | 175.28 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 705 | 175.34 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 735 | 175.55 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 753 | 175.57 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 783 | 175.82 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 10 | 5 |
| 784 | 175.82 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 9 |
| 807 | 175.99 | precipitation | 0.1 | 90 | < th | dose independent | sin | 0 | NA |
| 809 | 175.99 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 0 | NA |
| 825 | 176.04 | precipitation | 0.1 | 90 | > th | dose independent | sin | 0 | NA |
| 838 | 176.11 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 840 | 176.12 | wind | 3.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 898 | 176.45 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 921 | 176.53 | wind | 1.0 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 958 | 176.66 | wind | 1.0 | 270 | < th | dose dependent | rect. | 9 | 17 |
| 966 | 176.69 | wind | 3.0 | 30 | < th | dose independent | rect. | 12 | 3 |
| 984 | 176.79 | wind | 3.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 991 | 176.82 | wind | 1.0 | 270 | < th | dose independent | rect. | 17 | 10 |