Os11g0598000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0598000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.34 | 0.25 | 9.68 | 0.328 | 0.147 | 1.42 | 0.529 | -0.493 | 0.112 | 19.1 | 11.42 | 813 | -- | -- |
| 28.5 | 0.249 | 9.67 | 0.41 | 0.166 | 1.42 | 0.496 | -- | 0.133 | 18.9 | 12.16 | 844 | -- | -- |
| 28.31 | 0.248 | 9.67 | 0.404 | 0.184 | 1.48 | -- | -0.11 | 0.13 | 0.852 | -11.79 | 606 | -- | -- |
| 28.32 | 0.248 | 9.67 | 0.426 | 0.187 | 1.48 | -- | -- | 0.134 | 0.805 | 2.855 | 605 | -- | -- |
| 29.43 | 0.253 | 9.67 | 0.368 | -- | 1.54 | -- | -0.147 | 0.116 | -- | -9.87 | 722 | -- | -- |
| 54.31 | 0.345 | 9.63 | 0.792 | 0.457 | -- | 0.297 | -- | 0.36 | 21 | -- | -- | -- | -- |
| 54.59 | 0.346 | 9.63 | 0.781 | 0.455 | -- | -- | -- | 0.359 | 21.1 | -- | -- | -- | -- |
| 29.44 | 0.253 | 9.67 | 0.395 | -- | 1.54 | -- | -- | 0.123 | -- | 12.81 | 722 | -- | -- |
| 32.57 | 0.266 | 9.68 | -- | 0.12 | 1.65 | -- | -- | 0.0648 | 0.863 | 9.572 | 686 | -- | -- |
| 66.54 | 0.381 | 9.62 | 0.782 | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
| 70.68 | 0.393 | 9.65 | -- | 0.454 | -- | -- | -- | 0.272 | 21.3 | -- | -- | -- | -- |
| 33.13 | 0.268 | 9.68 | -- | -- | 1.69 | -- | -- | 0.0597 | -- | 10.74 | 740 | -- | -- |
| 82.68 | 0.424 | 9.64 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 4 | 27.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 21 | 27.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 46 | 28.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 47 | 28.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 59 | 28.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 90 | 28.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 97 | 28.59 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 102 | 28.63 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 154 | 28.91 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 193 | 29.14 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 194 | 29.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 205 | 29.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 216 | 29.19 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 219 | 29.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 226 | 29.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 13 |
| 249 | 29.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 17 |
| 547 | 29.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 587 | 29.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |