Os11g0593700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0593700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.86 | 0.234 | 8.42 | 0.739 | 0.098 | -0.275 | -0.473 | -0.579 | 0.115 | 5.16 | 64 | 4494 | -- | -- |
| 25.15 | 0.234 | 8.42 | 0.757 | 0.084 | -0.299 | -0.463 | -- | 0.148 | 5.25 | 65 | 4153 | -- | -- |
| 25.39 | 0.235 | 8.42 | 0.735 | 0.108 | -0.271 | -- | -0.603 | 0.112 | 5.7 | 65 | 4656 | -- | -- |
| 25.64 | 0.236 | 8.42 | 0.757 | 0.0901 | -0.308 | -- | -- | 0.153 | 6.69 | 64.54 | 4092 | -- | -- |
| 25.78 | 0.236 | 8.42 | 0.743 | -- | -0.28 | -- | -0.427 | 0.131 | -- | 64.01 | 4164 | -- | -- |
| 26.84 | 0.243 | 8.44 | 0.75 | 0.0989 | -- | -0.461 | -- | 0.069 | 5.35 | -- | -- | -- | -- |
| 27.36 | 0.245 | 8.43 | 0.749 | 0.0973 | -- | -- | -- | 0.0712 | 5.85 | -- | -- | -- | -- |
| 26.04 | 0.238 | 8.42 | 0.761 | -- | -0.309 | -- | -- | 0.154 | -- | 64.52 | 4155 | -- | -- |
| 40.59 | 0.297 | 8.43 | -- | 0.107 | -0.302 | -- | -- | 0.0717 | 6.47 | 63.08 | 3966 | -- | -- |
| 27.85 | 0.247 | 8.44 | 0.752 | -- | -- | -- | -- | 0.0735 | -- | -- | -- | -- | -- |
| 42.16 | 0.304 | 8.45 | -- | 0.109 | -- | -- | -- | -0.0122 | 5.52 | -- | -- | -- | -- |
| 36.31 | 0.281 | 8.41 | -- | -- | -0.491 | -- | -- | 0.121 | -- | 50.02 | 4376 | -- | -- |
| 42.78 | 0.305 | 8.45 | -- | -- | -- | -- | -- | -0.00995 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.72 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 3 | 24.86 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 18 | 11 |
| 4 | 24.87 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 6 | 24.92 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 7 | 24.95 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 8 | 24.95 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 22 | 24.96 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 44 | 24.97 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 51 | 25.00 | humidity | 60.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 71 | 25.00 | wind | 5.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 92 | 25.01 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 95 | 25.02 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 117 | 25.03 | humidity | 60.0 | 4320 | > th | dose independent | no | NA | NA |
| 118 | 25.03 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 123 | 25.03 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 199 | 25.03 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 18 | 20 |
| 234 | 25.03 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 241 | 25.03 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 10 | 3 |
| 242 | 25.03 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 10 | 6 |
| 288 | 25.04 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 23 |
| 342 | 25.05 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 350 | 25.06 | humidity | 70.0 | 4320 | < th | dose dependent | sin | 1 | NA |
| 359 | 25.07 | humidity | 60.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 387 | 25.07 | humidity | 70.0 | 4320 | < th | dose dependent | sin | 23 | NA |
| 421 | 25.08 | humidity | 60.0 | 4320 | < th | dose independent | sin | 22 | NA |
| 423 | 25.08 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 462 | 25.08 | humidity | 70.0 | 4320 | < th | dose dependent | no | NA | NA |
| 559 | 25.08 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 14 | 22 |
| 585 | 25.09 | humidity | 60.0 | 4320 | < th | dose independent | no | NA | NA |
| 588 | 25.09 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 709 | 25.09 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 23 |
| 731 | 25.09 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 779 | 25.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 792 | 25.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 800 | 25.12 | humidity | 50.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 851 | 25.13 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 11 |
| 854 | 25.13 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 858 | 25.13 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 11 |
| 860 | 25.13 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 11 |
| 861 | 25.13 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 870 | 25.13 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 904 | 25.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 11 |
| 909 | 25.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 912 | 25.14 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 13 |
| 916 | 25.14 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 933 | 25.14 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 945 | 25.15 | radiation | 1.0 | 30 | < th | dose independent | rect. | 18 | 11 |
| 957 | 25.15 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 962 | 25.16 | humidity | 50.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 971 | 25.16 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 986 | 25.16 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 18 | 11 |