BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0593700 Os11g0593700|AK106617
(423 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G57790.1 | chr1:21404578-21405636 REVERSE LENGTH=353 64 1e-10
AT4G22180.1 | chr4:11738574-11739782 FORWARD LENGTH=403 57 2e-08
AT5G25290.1 | chr5:8778592-8779785 FORWARD LENGTH=398 56 4e-08
AT5G03390.1 | chr5:835260-836609 FORWARD LENGTH=374 55 7e-08
AT2G05970.1 | chr2:2308651-2309784 REVERSE LENGTH=378 52 5e-07
AT2G17030.1 | chr2:7399108-7400650 FORWARD LENGTH=408 52 7e-07
AT4G17565.1 | chr4:9782508-9783644 REVERSE LENGTH=379 50 2e-06
AT5G55150.1 | chr5:22382275-22383392 REVERSE LENGTH=361 50 2e-06
>AT1G57790.1 | chr1:21404578-21405636 REVERSE LENGTH=353
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 104/265 (39%), Gaps = 68/265 (25%)
Query: 6 WSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRAACTAVRRVRFPITDKSPCLLYSCEADD 65
W LP +++ VM LEI D + A VC SW A +VR + DKSP L+Y E +
Sbjct: 13 WKDLPLELLSSVMTFLEIKDNVRASVVCKSWFEAAVSVR-----VIDKSPWLMYFPETKN 67
Query: 66 PDLATFYSPSNNATFKVRLPGP--PFRRRYTVGSDHGWIVTADE-LSNLQVINPLSGVQI 122
FY PSN + + LP F RY S GW++ + E S+ + NP + +
Sbjct: 68 T--YDFYDPSNCKKYTMELPKSLVGFIVRY---SKDGWLLMSQEDSSHFVLFNPFTMDVV 122
Query: 123 DLPPVTELYNVESFTDEQGSLMYNNYEDSMHRDDPLGFPVPYPPQRLRLFLYFRVILSCS 182
LP L LF Y++++ S
Sbjct: 123 ALP------------------------------------------FLHLFTYYQLVGFSS 140
Query: 183 PSAGSECVVLLLHSPD-GQLSFARI--GDHSWTRLTDIENLWDRGYRCAVYNKNDGLFYL 239
SECVV + D G ++ G WT + D + V+ ++G+FY
Sbjct: 141 APTSSECVVFTIKDYDPGHVTIRTWSPGQTMWTSMQVESQFLDVDHNNVVF--SNGVFYC 198
Query: 240 LH-------FQGSIHTLN-LNGPSP 256
L+ F S+ T N L+ P P
Sbjct: 199 LNQRNHVAVFDPSLRTWNVLDVPPP 223
>AT4G22180.1 | chr4:11738574-11739782 FORWARD LENGTH=403
Length = 402
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 4 SDWSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRAACTAVRRVRFPITDKSPCLLYSCEA 63
+ WS LP D++ V +L + A +VC+SW + R PI + P L+ E
Sbjct: 19 NSWSELPLDLLTAVFERLSYANFQRAKSVCSSWHSGS----RQSVPI--QIPWLILFPEY 72
Query: 64 DDPDLATFYSPSNNA-TFKVRLPGPPFRRRYTVGSDHGWIVTADELSNLQVINPLSGVQI 122
D+ + T ++P +K++ G F + + W++ D L NL ++N + ++
Sbjct: 73 DNNNSCTLFNPEEKGQVYKMKDLGVEFSKSVCTATYGSWLLMRDPLYNLYILNLFTHERV 132
Query: 123 DLPP 126
+LPP
Sbjct: 133 NLPP 136
>AT5G25290.1 | chr5:8778592-8779785 FORWARD LENGTH=398
Length = 397
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 3 ISDWSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRAAC--TAVRRVRFPITDKSPCLLYS 60
++ WS +P DI+ V +L DL A VC+ W + + +R+ R P+ +L+S
Sbjct: 11 VTLWSEIPMDILRSVFERLSFVDLHRAKIVCSHWYSCSKQSFLRKTRSPLV-----ILFS 65
Query: 61 CEADDPDLATFYSPSNNATFKVRLPGPPFRRRYTVGSDHGWIVTADELSNLQVINPLSGV 120
+ D T Y+P +K + +R + + W + D SNL +I+ S
Sbjct: 66 DDGD----CTLYNPEEARVYKSKRDLSRYR---FLANSGNWFLVLDPRSNLYIIDLFSEK 118
Query: 121 QIDLPPVTEL----YNVESFTDEQGSLMYNNYEDSMH 153
+I+LPP+ YN++ + + + Y S H
Sbjct: 119 KINLPPLDSFKGYKYNLKKVGARKFKELVSEYPTSFH 155
>AT5G03390.1 | chr5:835260-836609 FORWARD LENGTH=374
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 177 VILSCSPSAGSECVVLLLHSPDGQLSFARIGDHSWTRLTDIENLWDRGYRCAVYNKNDGL 236
+ LS SP+ +CV+ + S LS R GD +WTR+ + +Y+ D
Sbjct: 133 ISLSASPNQ-QDCVLAVKSSSSPFLSLWRPGDSAWTRI----KVPFPASNVMMYSGRDRK 187
Query: 237 FYLL------HFQGSIHTLNLNG-----------------PSPVVNEILKGVTAWDNPTK 273
FYLL +G I +N + P ++L + T+
Sbjct: 188 FYLLPRESKEECEGPIDLINTSSDDFPQVTLYQRFPNSDIPVSRQEQLLSSIK-----TR 242
Query: 274 SIVMTPRGDMLQVWRC--RELCWNDAPVQ-FPSEDSEDVHDPCQELYTDEMLLYKVDFDD 330
+V +P GD V+ C R W V+ + ++ C+ L T ++++ D +
Sbjct: 243 YLVESPSGDSFIVYWCNERSFYWKKGEVKPWTGKNPPPSRISCR-LKTRTFVVFRQDSEQ 301
Query: 331 QKLDKIDSLKDYVLFLGFNSSICLSAKEFPNLRPGCAYLA 370
+ + D +FLG + C+SA E+P LRP Y A
Sbjct: 302 GIGSYTEDIGDLCIFLGHREAFCVSATEYPGLRPNSVYYA 341
>AT2G05970.1 | chr2:2308651-2309784 REVERSE LENGTH=378
Length = 377
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 4 SDWSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRAA---CTAVRR-----VRFPITDKSP 55
+ WS L D++ V L DL +VC+SW +A C + + FP + +
Sbjct: 8 ASWSELCPDVLRCVFELLSFSDLNRTRSVCSSWHSASRHCVPTQNQIPWLILFPRNNVNN 67
Query: 56 CLLYSCEADDPDLATFYSPSNNATFKVRLPGPPFRRRYTVGSDHGWIVTADELSNLQVIN 115
SC PD ++ +K + G F + + WI+ D L NL ++N
Sbjct: 68 NNNNSCVLFVPD-------DRDSLYKTKDLGVGFMLSNCLATYGSWILMMDRLCNLNILN 120
Query: 116 PLSGVQIDLP 125
PL+G +IDLP
Sbjct: 121 PLTGEKIDLP 130
>AT2G17030.1 | chr2:7399108-7400650 FORWARD LENGTH=408
Length = 407
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 174/414 (42%), Gaps = 65/414 (15%)
Query: 5 DWSSLPKDIVIVVMGKLEIP-DLLSAGAVCASWRAACTAVRRVRFPI-TDKSPCLLYSCE 62
DWS+LPKD++ ++ LE DL+ +VC+SWR+A + P+ T P L +
Sbjct: 3 DWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP----KSPLPTHHLPILPDNGG 58
Query: 63 ADDPDLATFYSPSNNATFKVRLPGPPFRRRYTVGSD-HGWIVTADELSN----LQVINPL 117
+ PD A + S + ++ P P + SD GW++ +E N + +++PL
Sbjct: 59 SLFPDSAVGFRLSQRSILLIK-PHEP-----CIESDSFGWLIKVEEDLNVPRKVTLLDPL 112
Query: 118 ----SGVQIDLPPVTEL--YNVESFTDEQGSLMYNNYEDSMHRDDPLGFPVPYPPQRLRL 171
+ + + P V ++ + V E +N D + L
Sbjct: 113 CDTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVE----------------SL 156
Query: 172 FLYFRVILSCSPSAGSECVVLLLHSPDGQLSFARIGDHSWTRLTDIENLWDRGYRCAVYN 231
+L V+ + V+L +H G+L+ R D +WT + D+ + +D
Sbjct: 157 YLEKAVVKYLDCDGDYKFVLLTIHV-SGKLAVFRSWDRAWTVINDMPSPYDD-------- 207
Query: 232 KNDGLFYLLHFQGSIHTLNLNGPSPVVNEILKGVTAWDNPT----KSIVMTPRGDMLQVW 287
++ F G ++ NG + VV+ +T +P K ++ G+ML V
Sbjct: 208 -------VMLFDGRFFAVDNNGRTVVVDYSSLKLTLVASPVFGGDKKFLIESCGEMLLVD 260
Query: 288 RCRELCWNDAPVQFPSEDSEDVHDPCQELYTDEMLLYKVDFDDQKLDKIDSLKDYVLFLG 347
L + F E E E + V+ ++ +D D L+D +LFLG
Sbjct: 261 MYLSLEAVEGDPGFVEEIFEHPAFYMNERTVKFKVYRFVEREESWVDVYD-LEDKMLFLG 319
Query: 348 FNSSICLSAKEFPNLRPGCAYLADDSY---EEIGINKHTLREVGIWNFKSETLE 398
+S+ SA + L G + + + E++G + R++G+++F+S +E
Sbjct: 320 DDSTFSASASDILPLCDGSSVFFNGNVFNGEDLGAMQD--RDLGVFDFRSGKIE 371
>AT4G17565.1 | chr4:9782508-9783644 REVERSE LENGTH=379
Length = 378
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 3 ISDWSSLPKDIVIVVMGKLEIPDLLSAGAVCASWRAACTAVRRVRFPITDKSPCLLY--- 59
I WS L D++ + +L +L A VC SW +A P ++ P ++
Sbjct: 15 IPKWSELCPDLLRSIFEQLSFTNLNRAKLVCRSWNSASRGC----VPKRNQIPWMILFPQ 70
Query: 60 SCEADDPDLATFYSPSNN-ATFKVRLPGPPFRRRYTVGSDHGWIVTADELSNLQVINPLS 118
E + + + P +N +K R G F + + + W++ + L NL ++NPL+
Sbjct: 71 KSENNSSNNCVLFVPDDNDKVYKTRDLGVDFAQSICLATYGSWLLMFNHLRNLYILNPLT 130
Query: 119 GVQIDLPPVTEL 130
+IDLP T +
Sbjct: 131 LERIDLPHSTSI 142
>AT5G55150.1 | chr5:22382275-22383392 REVERSE LENGTH=361
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 53/258 (20%)
Query: 4 SDWSSLPKDIVIVVMGKL-EIPDLLSAGAVCASWRAACTAVRRVRFPITDKSPCLLYSCE 62
S WS +++ V L + D+L+ VC+SW+ + +AV R SP L S
Sbjct: 6 SSWSEFLPELLNTVFHNLNDARDILNCATVCSSWKDSSSAVYYSR----TFSPFLFISHL 61
Query: 63 ADDPDLATFYSPSNNATFKVRLPGP----PFRRRYTVGSDHGWIVTADELSNLQVINPLS 118
+ + ++ + F+V PG ++ + GS G+++T P++
Sbjct: 62 SSNEEIRF------SDQFRVLSPGKLGFSGNQQAWVCGSTLGFLLT----------KPVT 105
Query: 119 GVQIDLPPVTELYNVESFTDEQGSLMYNNYEDSMHRDDPLGFPVPYPPQRLRLFLYFRVI 178
LPP+ +V+ Q + P L + +
Sbjct: 106 KSVTSLPPLISFEDVQRLLQSQAII----------------------PDSEALKNFIKKA 143
Query: 179 LSCSPSAGSECVVLLLHSPDGQLSFARIGDHSWTRLTDIENLWDRGYRCAVYNKNDGLFY 238
+S + E VVL++++ D +L+F R GD WT L + + D C +G+F+
Sbjct: 144 VSSTSLLDDEWVVLVIYNTDRKLAFCRRGDKQWTDLESVASSVDDIVFC------NGVFF 197
Query: 239 LLHFQGSIHTLNLNGPSP 256
+ G I+ L+ +P
Sbjct: 198 AIDRLGEIYHCELSANNP 215
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.139 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,426,509
Number of extensions: 486381
Number of successful extensions: 1178
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1186
Number of HSP's successfully gapped: 8
Length of query: 423
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 322
Effective length of database: 8,337,553
Effective search space: 2684692066
Effective search space used: 2684692066
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)