Os11g0584100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0584100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.64 | 0.422 | 5.53 | -2.17 | 2.28 | -130 | 0.304 | -273 | 0.53 | 16 | 14.96 | 5846 | -- | -- |
| 91.43 | 0.449 | 7.41 | 1.96 | 2.31 | -0.554 | 0.0184 | -- | 0.566 | 15.9 | 14.96 | 5846 | -- | -- |
| 80.85 | 0.419 | 5.53 | -2.16 | 2.28 | -130 | -- | -273 | 0.53 | 16 | 14.96 | 5883 | -- | -- |
| 84.55 | 0.428 | 7.4 | 2.04 | 2.33 | 1.53 | -- | -- | 0.572 | 16 | 10.83 | 4049 | -- | -- |
| 363.2 | 0.888 | 5.39 | -2.61 | -- | -116 | -- | -243 | 0.451 | -- | 15.18 | 5972 | -- | -- |
| 92.02 | 0.45 | 7.4 | 1.98 | 2.31 | -- | -0.0368 | -- | 0.572 | 15.9 | -- | -- | -- | -- |
| 92.02 | 0.449 | 7.4 | 1.98 | 2.31 | -- | -- | -- | 0.572 | 15.9 | -- | -- | -- | -- |
| 370.88 | 0.897 | 7.39 | 2.01 | -- | 2.21 | -- | -- | 0.55 | -- | 10.1 | 3353 | -- | -- |
| 194.82 | 0.65 | 7.45 | -- | 2.27 | 0.58 | -- | -- | 0.356 | 16 | 11.7 | 3271 | -- | -- |
| 384.85 | 0.917 | 7.4 | 1.89 | -- | -- | -- | -- | 0.51 | -- | -- | -- | -- | -- |
| 195.79 | 0.655 | 7.45 | -- | 2.27 | -- | -- | -- | 0.351 | 15.9 | -- | -- | -- | -- |
| 474.94 | 1.02 | 7.44 | -- | -- | 1.17 | -- | -- | 0.31 | -- | 10.54 | 3522 | -- | -- |
| 479.01 | 1.02 | 7.44 | -- | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.04 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 2 | 70.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 3 | 70.47 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 13 |
| 4 | 70.51 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 5 | 70.87 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 12 |
| 6 | 70.89 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 5 |
| 8 | 71.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 5 |
| 13 | 71.35 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 14 | 71.36 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 4 |
| 18 | 71.61 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 11 |
| 22 | 71.78 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 13 |
| 31 | 72.06 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 2 | 18 |
| 36 | 72.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 5 |
| 45 | 72.48 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 5 |
| 46 | 72.49 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 54 | 72.66 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 57 | 72.71 | radiation | 40.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 59 | 72.72 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 71 | 73.06 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 2 | 4 |
| 77 | 73.15 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 86 | 73.27 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 12 |
| 88 | 73.27 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 4 |
| 92 | 73.28 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 101 | 73.41 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 2 | 9 |
| 103 | 73.43 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 112 | 73.57 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 12 |
| 122 | 73.63 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 14 |
| 123 | 73.65 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 124 | 73.65 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 132 | 73.74 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 133 | 73.74 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 135 | 73.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 145 | 73.88 | wind | 9.0 | 90 | < th | dose dependent | rect. | 2 | 13 |
| 160 | 73.99 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 162 | 73.99 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 163 | 73.99 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 166 | 73.99 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 167 | 73.99 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 169 | 73.99 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 172 | 73.99 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 179 | 74.03 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 183 | 74.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 184 | 74.07 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 4 |
| 193 | 74.11 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 196 | 74.13 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 241 | 74.46 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 251 | 74.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 255 | 74.54 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 256 | 74.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 259 | 74.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 263 | 74.54 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 268 | 74.54 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 269 | 74.54 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 270 | 74.54 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 274 | 74.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 281 | 74.56 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 373 | 74.86 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 396 | 74.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 22 |
| 425 | 75.00 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 463 | 75.21 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 468 | 75.23 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 477 | 75.28 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 11 | 16 |
| 487 | 75.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 13 |
| 489 | 75.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 517 | 75.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 535 | 75.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 540 | 75.48 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 12 |
| 542 | 75.48 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 20 |
| 565 | 75.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 11 |
| 567 | 75.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 11 |
| 571 | 75.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 22 |
| 572 | 75.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 592 | 75.63 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 13 |
| 619 | 75.66 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 628 | 75.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 629 | 75.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 11 |
| 630 | 75.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 631 | 75.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 634 | 75.72 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 4 |
| 699 | 75.82 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 727 | 75.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 738 | 75.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 22 |
| 747 | 75.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 11 |
| 748 | 75.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 753 | 75.95 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 761 | 75.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 11 |
| 763 | 75.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 13 |
| 766 | 76.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 776 | 76.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 788 | 76.10 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 794 | 76.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 11 |
| 797 | 76.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 808 | 76.15 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 813 | 76.18 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 818 | 76.19 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 823 | 76.22 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 4 |
| 834 | 76.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 844 | 76.29 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 858 | 76.34 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 13 |
| 908 | 76.53 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 955 | 76.61 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 963 | 76.62 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 965 | 76.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 966 | 76.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 997 | 76.74 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 998 | 76.74 | radiation | 40.0 | 270 | < th | dose independent | rect. | 20 | 14 |