Os11g0582700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0582700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.1 | 0.458 | 6.77 | -1.32 | 0.954 | -3.05 | -0.017 | -0.125 | -0.148 | 2.23 | 28.34 | 14 | -- | -- |
| 95.11 | 0.454 | 6.77 | -1.34 | 0.95 | -3.04 | -0.0619 | -- | -0.154 | 2.22 | 28.33 | 13 | -- | -- |
| 95.09 | 0.454 | 6.77 | -1.31 | 0.953 | -3.05 | -- | -0.15 | -0.148 | 2.23 | 28.31 | 13 | -- | -- |
| 93.44 | 0.45 | 6.78 | -1.34 | 0.829 | -3.01 | -- | -- | -0.167 | 2.8 | 27.56 | 91 | -- | -- |
| 109.68 | 0.488 | 6.73 | -1.23 | -- | -2.84 | -- | -0.418 | -0.0253 | -- | 24.66 | 301 | -- | -- |
| 223.48 | 0.701 | 6.62 | -0.621 | 0.0325 | -- | 0.757 | -- | 0.493 | 9.36 | -- | -- | -- | -- |
| 225.53 | 0.703 | 6.62 | -0.592 | 0.0344 | -- | -- | -- | 0.494 | 11.8 | -- | -- | -- | -- |
| 102.38 | 0.471 | 6.77 | -1.52 | -- | -3.05 | -- | -- | -0.144 | -- | 24.9 | 1535 | -- | -- |
| 137.33 | 0.549 | 6.72 | -- | 0.703 | -2.47 | -- | -- | 0.0877 | 2.06 | 27.56 | 91 | -- | -- |
| 225.6 | 0.702 | 6.62 | -0.593 | -- | -- | -- | -- | 0.494 | -- | -- | -- | -- | -- |
| 234.78 | 0.717 | 6.61 | -- | 0.0427 | -- | -- | -- | 0.56 | 12.6 | -- | -- | -- | -- |
| 149.09 | 0.569 | 6.69 | -- | -- | -2.24 | -- | -- | 0.188 | -- | 24.9 | 286 | -- | -- |
| 234.89 | 0.715 | 6.61 | -- | -- | -- | -- | -- | 0.559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 2 | 95.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 3 | 95.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 4 | 96.35 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 8 | 96.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 13 | 97.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 15 | 97.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 16 | 98.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 29 | 98.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 44 | 98.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 45 | 98.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 51 | 99.08 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 65 | 99.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 77 | 99.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 135 | 99.90 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 137 | 99.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 158 | 100.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 166 | 100.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 253 | 101.34 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 274 | 101.82 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 297 | 102.19 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 328 | 102.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 342 | 102.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 439 | 103.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 453 | 103.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 469 | 104.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 539 | 104.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 542 | 104.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 582 | 104.87 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 629 | 105.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 700 | 105.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 869 | 106.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 918 | 107.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 945 | 107.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |