BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0221100 Os01g0221100|AK072125
(462 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0221100 GH3 auxin-responsive promoter family protein 875 0.0
Os11g0186500 494 e-140
Os05g0586200 GH3 auxin-responsive promoter family protein 488 e-138
Os05g0500900 Similar to Indole-3-acetic acid-amido syntheta... 230 2e-60
Os11g0528700 Similar to Indole-3-acetic acid-amido syntheta... 228 7e-60
Os07g0592600 Similar to Indole-3-acetic acid-amido syntheta... 228 9e-60
Os01g0785400 GH3 auxin-responsive promoter family protein 223 2e-58
Os01g0764800 Similar to Nt-gh3 deduced protein 219 5e-57
Os06g0499500 Similar to Indole-3-acetic acid-amido syntheta... 214 1e-55
Os05g0143800 GH3 auxin-responsive promoter family protein 150 2e-36
Os07g0576500 Similar to Indole-3-acetic acid-amido syntheta... 146 3e-35
Os07g0671500 Similar to Indole-3-acetic acid-amido syntheta... 114 1e-25
Os07g0576100 GH3 auxin-responsive promoter family protein 85 1e-16
Os05g0453600 75 1e-13
>Os01g0221100 GH3 auxin-responsive promoter family protein
Length = 462
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/462 (92%), Positives = 429/462 (92%)
Query: 1 MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGA 60
MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGA
Sbjct: 1 MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGA 60
Query: 61 TDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNE 120
TDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNE
Sbjct: 61 TDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNE 120
Query: 121 ELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFK 180
ELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSRE NVYRSEEFK
Sbjct: 121 ELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSRETRTKGGLTATTATTNVYRSEEFK 180
Query: 181 ATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFER 240
ATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFER
Sbjct: 181 ATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFER 240
Query: 241 AWEDLCADIRRGEVSPSRVTSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPAL 300
AWEDLCADIRRGEVSPSRVTS DEVARKCAALSNWYGVIPAL
Sbjct: 241 AWEDLCADIRRGEVSPSRVTSPAVRRAMAALLAAPNPGLADEVARKCAALSNWYGVIPAL 300
Query: 301 WPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTV 360
WPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTV
Sbjct: 301 WPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTV 360
Query: 361 LPDIAYFEFIPLKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFAGNTRSSSSCMTLVA 420
LPDIAYFEFIPLKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFAGNTRSSSSCMTLVA
Sbjct: 361 LPDIAYFEFIPLKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFAGNTRSSSSCMTLVA 420
Query: 421 YYYLQSKKWMNICRFCISVHETSRNLVTCTFAATGHIMFAQK 462
YYYLQSKKWMNICRFCISVHETSRNLVTCTFAATGHIMFAQK
Sbjct: 421 YYYLQSKKWMNICRFCISVHETSRNLVTCTFAATGHIMFAQK 462
>Os11g0186500
Length = 613
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/454 (56%), Positives = 305/454 (67%), Gaps = 24/454 (5%)
Query: 1 MLEKKATR-STRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAG 59
MLEK+ +R D E ++ FER TRDAA+VQRETLRRILAEN GVEYLR LGLAG
Sbjct: 1 MLEKEGKLIMSRED----EEIMAWFERTTRDAADVQRETLRRILAENAGVEYLRELGLAG 56
Query: 60 ATDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFN 119
TD +FRARVP+ THADL+PYI R+ADGDASPVLTAKP T+ISLSSGTTQGKRK LLFN
Sbjct: 57 LTDAGSFRARVPVVTHADLDPYIQRVADGDASPVLTAKPVTAISLSSGTTQGKRKRLLFN 116
Query: 120 EELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEF 179
++L++S+++ + SYAF NR FPVE+G+ LQF+Y SR N+ RSEEF
Sbjct: 117 DDLLRSSIRFFHASYAFTNRAFPVEDGRVLQFMYGSRHETTKGGLTATTVMTNLLRSEEF 176
Query: 180 KATM---RDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQ 236
A+M + CSP EV+F PDF +SLYCHLL GLL AG+V+ VSA+FAHS+V+A Q
Sbjct: 177 TASMAARSRPRLPSCSPSEVVFSPDFDESLYCHLLCGLLLAGEVRAVSASFAHSIVVALQ 236
Query: 237 TFERAWEDLCADIRRGEVSPSRVTSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGV 296
ER W +LCADIRRG SP+RVT+ D + R+CAAL +W GV
Sbjct: 237 ALERVWRELCADIRRGAASPARVTTPAVRRAVAPILAAPNPALADALERRCAALGDWSGV 296
Query: 297 IPALWPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERA 356
IPALWPNARYV MTGSMEHYVKKLRHYAGG+PLV+ Y +SEG +G N E PPE
Sbjct: 297 IPALWPNARYVQATMTGSMEHYVKKLRHYAGGVPLVSGNYASSEGVIGINAEQHAPPESV 356
Query: 357 TFTVLPDIAYFEFIPLKP-------------VAGDGGYAEAE---PVGLTEVAAGELYEV 400
FTVLPD AYFEFIPLKP AG Y +A+ PVGLT+V GE YEV
Sbjct: 357 VFTVLPDAAYFEFIPLKPPCTDAAADDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEV 416
Query: 401 VMTTFAGNTRSSSSCMTLVAYYYLQSKKWMNICR 434
VMTTF G R + VA ++ + K +CR
Sbjct: 417 VMTTFTGLYRYRLGDVVKVAGFHHATPKLRFVCR 450
>Os05g0586200 GH3 auxin-responsive promoter family protein
Length = 581
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/426 (54%), Positives = 298/426 (69%), Gaps = 9/426 (2%)
Query: 16 SGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPATFRARVPLATH 75
S E I EFE +TRDAA VQ++TL++IL N EYL+ GL G TD ++++ +PL H
Sbjct: 5 SCEETINEFEMLTRDAARVQKDTLKKILEINASAEYLQNFGLGGRTDAESYKSCIPLCVH 64
Query: 76 ADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVKSTMQIYRISYA 135
D+EPYI RI DGD SPV+T +P T++SLSSGTT GK K++ FN+EL+++T+QIYR SYA
Sbjct: 65 NDIEPYIQRIVDGDTSPVVTGEPITNLSLSSGTTHGKPKFIPFNDELLETTLQIYRTSYA 124
Query: 136 FRNREFPVENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQCCSPDE 195
FRNRE+P+ GKALQF+Y S++ N+YR + +K M+DIQSQCCSPDE
Sbjct: 125 FRNREYPIGQGKALQFVYGSKQVITKGGILATTATTNLYRRQRYKEGMKDIQSQCCSPDE 184
Query: 196 VIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVS 255
VIFGPDF QSLYCHLL GL+ + +V V +TFAHS+V AFQTFE WEDLC DIR G +S
Sbjct: 185 VIFGPDFHQSLYCHLLCGLIYSEEVHSVFSTFAHSLVHAFQTFEEVWEDLCTDIRDGVLS 244
Query: 256 PSRVTSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNARYVYGIMTGSM 315
+VT+ D + +KC LSNWYGVIPALWPNA+YVYGIMTGSM
Sbjct: 245 -KKVTA-PSIREAVSKILKPNPELADSIYKKCIGLSNWYGVIPALWPNAKYVYGIMTGSM 302
Query: 316 EHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPL-KP 374
E Y+KKLRHYAG LPL++A+YGASEGWVG+N++P PPE+ T+ VLP + YFEFIPL KP
Sbjct: 303 EPYLKKLRHYAGNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLEKP 362
Query: 375 VAGDG------GYAEAEPVGLTEVAAGELYEVVMTTFAGNTRSSSSCMTLVAYYYLQSKK 428
+ + Y E++PVGLTEV G++YEVV+T FAG R + +A ++ + +
Sbjct: 363 IGEETENSASIHYIESDPVGLTEVEVGKIYEVVITNFAGLYRYRLGDVVKIARFHNSTPE 422
Query: 429 WMNICR 434
ICR
Sbjct: 423 LQFICR 428
>Os05g0500900 Similar to Indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-)
(Auxin- responsive GH3-like protein 5) (AtGH3-5)
Length = 629
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 199/398 (50%), Gaps = 12/398 (3%)
Query: 21 IEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPA--TFRARVPLATHADL 78
+E ERVTR+A QR L ILA+N EYLR LG+ G A FR PL T+ D+
Sbjct: 27 LEHIERVTRNAGQEQRRVLEEILAQNAQAEYLRRLGVPGDAPGADEAFRRLAPLVTYEDI 86
Query: 79 EPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVKSTMQIYRISYAFRN 138
P + RIA+GD SP+L+ KP + SSGT+ G+RK + EE ++ +Y + +
Sbjct: 87 LPDVLRIANGDTSPILSGKPVSEFLTSSGTSGGERKLMPTIEEEMERRSGLYSLLMPVMS 146
Query: 139 REFP-VENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQCCSPDEVI 197
R+ P ++ GKA+ + E + YRS F D + SPDE +
Sbjct: 147 RQVPGLDKGKAMYLYFVKSEWRTPGGLPARPVLTSFYRSRYFLERPHDPYTVYTSPDEAV 206
Query: 198 FGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPS 257
D QS+Y L+ GL+ DV V A FA + A + E+ W LC DIR GE+
Sbjct: 207 LCEDAYQSMYAQLICGLVHRADVLRVGAVFASGFLRAIRFLEKHWPSLCRDIRAGELD-G 265
Query: 258 RVTSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNARYVYGIMTGSMEH 317
VT D + +CA S W G+I +WP+ +Y+ I+TG+M
Sbjct: 266 GVTDPAVRGAVGRVLRGADPALADAIEAECARPS-WQGIIRRVWPSTKYIDVIVTGAMAQ 324
Query: 318 YVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKPVAG 377
Y+ L Y GGLPL Y +SE + G N+ P P +T++P + YFEF+P+ A
Sbjct: 325 YIPTLEFYGGGLPLACTMYASSECYFGLNLNPMCKPSEVAYTLIPTMCYFEFLPVNSGAN 384
Query: 378 DGGYAEAEP-----VGLTEVAAGELYEVVMTTFAGNTR 410
D A EP V L +V G YE+V+TT++G R
Sbjct: 385 D--VAAPEPDHRGLVDLVDVKLGHEYELVVTTYSGLYR 420
>Os11g0528700 Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC
6.3.2.-) (Auxin- responsive GH3-like protein 17)
(AtGH3-17)
Length = 469
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 210/423 (49%), Gaps = 19/423 (4%)
Query: 13 DGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRG------LGLAGATD--PA 64
D G A +E E +T AA VQR L +LA N G +YLR + AG D A
Sbjct: 39 DPHDGPACLELIEVLTTRAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVVAAAGGEDELAA 98
Query: 65 TFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVK 124
F+ RVP+ + D++PYI+RIA+G S ++++KP T + SSGT+ G+ K + EE +
Sbjct: 99 AFKERVPVVEYEDVKPYIERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPATEEELD 158
Query: 125 STMQIYRISYAFRNREFP-VENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATM 183
+Y + N+ ++ G+ + ++ E + Y+S F+
Sbjct: 159 RKTFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRHFRRRP 218
Query: 184 RDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWE 243
++ SPD I PD QS+Y LL GL G+V V A FA + + A + E W
Sbjct: 219 DSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGHWR 278
Query: 244 DLCADIRRGEVSPSRVTSXX-XXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWP 302
LCADIR G P+ VT D +A +C S W G++ LWP
Sbjct: 279 ALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGGAS-WRGIVRRLWP 337
Query: 303 NARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLP 362
+Y+ I+TGSM Y+ L Y GGLPLV+ Y +SE + G N+ P PPE +T+LP
Sbjct: 338 RTKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVVYTLLP 397
Query: 363 DIAYFEFIPLKPVAGDG-GYAEAEPVGLTEVAAGELYEVVMTTFAGNTRSS------SSC 415
++ Y+EFI ++ GDG + E V L V G YE+V+TTF G S +SC
Sbjct: 398 NMCYYEFIKVEK-DGDGEKVRDGEVVDLVGVEVGAYYELVVTTFTGERVCSPFDFFPTSC 456
Query: 416 MTL 418
M L
Sbjct: 457 MGL 459
>Os07g0592600 Similar to Indole-3-acetic acid-amido synthetase GH3.3 (EC 6.3.2.-)
(Auxin- responsive GH3-like protein 3) (AtGH3-3)
Length = 605
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 194/388 (50%), Gaps = 5/388 (1%)
Query: 24 FERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPATFRARVPLATHADLEPYID 83
+ +T + VQ L IL N G EYL GL GATD A FRA+VP+ ++ DL+PYI
Sbjct: 33 IDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQ 92
Query: 84 RIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVKSTMQIYRISYAFRNREFP- 142
RIA+GD SP+L+ P + SSGT+ G+RK + + + +Y + N P
Sbjct: 93 RIANGDRSPILSTHPVSEFLTSSGTSAGERKLMPTIMDELDRRQLLYSLLMPVMNLYVPG 152
Query: 143 VENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQCCSPDEVIFGPDF 202
++ GK L F++ E + Y+S+ FK D SP I D
Sbjct: 153 LDKGKGLYFLFVKSETKTPGGLTARPVLTSYYKSDHFKNRPYDPYHNYTSPTAAILCADA 212
Query: 203 AQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPSRVTSX 262
QS+Y ++ GL DV + A FA ++ A + + WE L DI GE++P RVT
Sbjct: 213 FQSMYAQMVCGLCQRNDVLRLGAVFASGLLRAIRFLQLNWEQLADDIESGELTP-RVTDP 271
Query: 263 XXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNARYVYGIMTGSMEHYVKKL 322
++ R + +W G+I +WPN +Y+ I+TG+M Y+ L
Sbjct: 272 SVREAVAAILLPDPELA--KLIRAECSKGDWAGIITRVWPNTKYLDVIVTGAMAQYIPTL 329
Query: 323 RHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKPVAGDGGYA 382
Y+GGLP+ Y +SE + G N+ P P ++T++P++ YFEF+P+ G A
Sbjct: 330 EFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVDETGAASGDA 389
Query: 383 EAEPVGLTEVAAGELYEVVMTTFAGNTR 410
+ V L V G YE+V+TT+AG R
Sbjct: 390 -TQLVDLARVEVGREYELVITTYAGLNR 416
>Os01g0785400 GH3 auxin-responsive promoter family protein
Length = 610
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 195/399 (48%), Gaps = 6/399 (1%)
Query: 14 GVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPA-TFRARVPL 72
G EA +E E VT +A VQR L ILA+N EYLR G+ G+ D FR VPL
Sbjct: 18 GAHAEA-LEFIEHVTANAGQVQRRVLGEILAQNAPAEYLRRYGIPGSPDVVDAFRRLVPL 76
Query: 73 ATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYL-LFNEELVKSTMQIYR 131
T+ L+P I RIA+GD SP+ + KP + SSGT+ G+RK + +E+ + ++
Sbjct: 77 VTYEGLQPDILRIANGDTSPIFSGKPISEFLTSSGTSGGERKLMPTIADEMNRRSLLYSL 136
Query: 132 ISYAFRNREFPVENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQCC 191
+ ++ GKA+ ++ E + YRS +F RD +
Sbjct: 137 LMPVMSQSVSGLDKGKAMYLLFVKAESRTPGGLAARPVLTSYYRSRQFLDRPRDPYTSYT 196
Query: 192 SPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRR 251
SPDE I D QS+Y LL GL+ DV V A FA + A E+ W LC DIR
Sbjct: 197 SPDEAILCVDSYQSMYAQLLCGLVHRADVLRVGAVFASGFLRAIHFLEKHWARLCHDIRT 256
Query: 252 GEVSPSRVTSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNARYVYGIM 311
GE+ P + D + +CA S W G+I LWP +Y+ I+
Sbjct: 257 GELDPE--ITDRVVRDAVGRVLRADPALADAIEDECARAS-WEGIIRRLWPRTKYIDVIV 313
Query: 312 TGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIP 371
TG+M Y+ L Y GGLPL Y +SE + G N+ P P +T++P + Y+EF+P
Sbjct: 314 TGTMSQYIPTLEFYGGGLPLTCTMYASSECYFGLNLNPMCKPSDVAYTLIPTMCYYEFLP 373
Query: 372 LKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFAGNTR 410
+ + + V L +V G YE+V+TT++G R
Sbjct: 374 VNCNNATAEASHRDLVDLVDVKLGHEYELVVTTYSGLYR 412
>Os01g0764800 Similar to Nt-gh3 deduced protein
Length = 614
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 194/393 (49%), Gaps = 5/393 (1%)
Query: 21 IEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPATFRARVPLATHADLEP 80
+E E +TR VQ L ILA N G EYLR G+ G TD F+ARVP+ T+ DL P
Sbjct: 33 LEFIEEMTRGFDAVQERVLAAILARNNGAEYLRRHGMEGRTDREAFKARVPVVTYEDLRP 92
Query: 81 YIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVKSTMQIYRISYAFRNRE 140
I+RIA+GD S ++++ P T SSGT+ G+RK + E+ + +Y + N
Sbjct: 93 EIERIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMNLY 152
Query: 141 FP-VENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQCCSPDEVIFG 199
P ++ GK L F++ E + Y+S+ FK D + SP I
Sbjct: 153 VPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPFDPYNVYTSPTAAILC 212
Query: 200 PDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPSRV 259
D QS+Y +L GL+A +V V A FA ++ A + + W +L DIR G +S ++V
Sbjct: 213 TDAFQSMYAQMLCGLVARAEVLRVGAVFASGLLRAIRFLQLHWRELAHDIRTGTLS-AKV 271
Query: 260 TSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNARYVYGIMTGSMEHYV 319
T V +C W G+I +WPN +Y+ I+TG+M Y+
Sbjct: 272 TEPSIRDAVAEVLAAPDAELAAFVEAECGK-DKWEGIITRMWPNTKYLDVIVTGAMAQYI 330
Query: 320 KKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKP--VAG 377
L+ Y+GGLP+ Y +SE + G N+ P P ++T++P++ YFE +P P
Sbjct: 331 PTLKFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFELMPHDPDAPPL 390
Query: 378 DGGYAEAEPVGLTEVAAGELYEVVMTTFAGNTR 410
V L + G YE+V+TT+AG R
Sbjct: 391 PRDAPPPRLVDLADAEVGREYELVITTYAGLCR 423
>Os06g0499500 Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC
6.3.2.-) (Auxin- responsive GH3-like protein 17)
(AtGH3-17)
Length = 620
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 206/423 (48%), Gaps = 24/423 (5%)
Query: 24 FERVTRDAANVQRETLRRILAENGGVEYLRGL--GLAGATDPA--TFRARVPLATHADLE 79
R+T DAA +QR LR IL+ N G EYLR G AG D F+ RVP++ + D++
Sbjct: 20 IHRLTADAAGIQRGVLREILSRNSGTEYLRRFLGGAAGDDDDVRDAFKRRVPVSGYEDVK 79
Query: 80 PYIDRIADGD--ASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVKSTMQIYRISYAFR 137
PY+DR+A G +S +L + P T +S SSGT+ G++K L E + + Y + R
Sbjct: 80 PYVDRVASGGEPSSALLCSDPITCLSRSSGTSGGQQKLLPSTAEELDRKVFFYAVQALVR 139
Query: 138 NREFPVENGKA--------LQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQ 189
N ++G+ + +++ Y S +F+ +
Sbjct: 140 NMSLHTDHGEDDDGGGGEGMYLMFAFHGDRTLSGLPIQSALTTYYHSRQFQECDIGGFDK 199
Query: 190 CCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADI 249
C SP E I P QS+YC LL GLL V V A+FA +V + E WE++C +I
Sbjct: 200 CTSPLEAILCPYGEQSMYCQLLCGLLHRCRVDRVGASFAAGLVRGIKFLENHWEEMCFNI 259
Query: 250 RRGEVSPSRVTSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNARYVYG 309
R G++S + DE+A +CA W G++ LWP ARY+
Sbjct: 260 RSGQLSDWITHTPLRDAVTGQYLQGSNPALADEIASECAR-KPWDGIVRRLWPRARYIRT 318
Query: 310 IMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEF 369
I+TGSM Y+ L Y GGLPLV+ Y ++E G N+ P PP ++ +LP+IAYFEF
Sbjct: 319 IVTGSMSQYIPILEVYGGGLPLVSPIYASTECAAGINLRPLDPPSHVSYALLPNIAYFEF 378
Query: 370 IPLKPVAG---------DGGYAEAEPVGLTEVAAGELYEVVMTTFAGNTRSSSSCMTLVA 420
+ + G D E + V L +V G YE+++TTFAG R + V+
Sbjct: 379 LEVMDENGEKVQGTTRLDDNLGEVKVVDLVDVKVGRCYELIVTTFAGLYRYRVGDLFTVS 438
Query: 421 YYY 423
+Y
Sbjct: 439 GFY 441
>Os05g0143800 GH3 auxin-responsive promoter family protein
Length = 429
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 186 IQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDL 245
+ S C SP EVI G D Q +YCHLL GL V + A +A ++ A + + W L
Sbjct: 19 VMSACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPYAAALARALRLLQSKWRQL 78
Query: 246 CADIRRGEVSPSRVTSXXXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNAR 305
C D+ G V VT R+ +W GV+ LWP+AR
Sbjct: 79 CDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRICERDDWRGVLRQLWPDAR 138
Query: 306 YVYGIMTGSMEHYVKKLRHYAG-GLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDI 364
Y+ + TG+ME Y ++H+AG LP++ +Y ASE +G N+E +PPE T+ +LP
Sbjct: 139 YISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRA 198
Query: 365 AYFEFIPLKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFAGNTRSSSSCMTLVAYYYL 424
AYFEFIP A G A AEPV + V AG+ YE+V TTF G R + +A ++
Sbjct: 199 AYFEFIPFDMDAAGRGAAAAEPVDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHH 258
Query: 425 QSKKWMNICR 434
S + + R
Sbjct: 259 SSPRLQFVTR 268
>Os07g0576500 Similar to Indole-3-acetic acid-amido synthetase GH3.4 (EC 6.3.2.-)
(Auxin- responsive GH3-like protein 4) (AtGH3-4)
(CF4-like protein)
Length = 622
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 12/268 (4%)
Query: 143 VENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQCCSPDEVIFGPDF 202
+E GK L F++ E +VY+SE+FK+ + SP I D
Sbjct: 173 LEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFKS----MAIAYTSPTAAILCEDA 228
Query: 203 AQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPSRVTSX 262
QS+Y ++ GL DV A FA ++V A + + W L ADI GE+ P
Sbjct: 229 FQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPS 288
Query: 263 XXXXXXXXXXXXXXXXXXDEVARKCAALSNWYGVIPALWPNARYVYGIMTGSMEHYVKKL 322
E R + +W G+I +WPN +YV I+TG+M Y++ L
Sbjct: 289 VREAVSGILRSDAELA---EFVRIECSKGDWAGIITRIWPNTKYVDAIVTGAMAQYIRTL 345
Query: 323 RHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKPVAGDGGYA 382
++Y+GGLP+V+ Y +SE + G N+ P P ++T++P+ AYFEF+P+ V
Sbjct: 346 QYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLPVGEVVDATNL- 404
Query: 383 EAEPVGLTEVAAGELYEVVMTTFAGNTR 410
V L V G YEVV+TT+AG +R
Sbjct: 405 ----VDLARVEVGREYEVVITTYAGLSR 428
>Os07g0671500 Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC
6.3.2.-) (Auxin- responsive GH3-like protein 17)
(AtGH3-17)
Length = 242
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 2/234 (0%)
Query: 17 GEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPATFRARVPLATHA 76
G +EE E +T +A Q L +IL N EYL + G+T+ + F+ VP+ T+
Sbjct: 10 GSGALEELEMLTVNAKEAQELILTKILERNQATEYLSKF-MNGSTNISAFKRHVPVVTYD 68
Query: 77 DLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVKSTMQIYRISYAF 136
+ PYI RIA G+ S +L + + SSGT++G+ + + + + +Y +
Sbjct: 69 KVHPYILRIATGEESSILCGEYILELLRSSGTSRGEPRLMPSILKDLDRRTYLYSLIMPI 128
Query: 137 RNREFP-VENGKALQFIYSSREXXXXXXXXXXXXXXNVYRSEEFKATMRDIQSQCCSPDE 195
N+ + GKA+ ++ E + Y+S F D+ + SPDE
Sbjct: 129 MNKYISGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKHDLYNNYTSPDE 188
Query: 196 VIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADI 249
VI PD QS+YC LL GL+ V + A FA + + + E+ W DL DI
Sbjct: 189 VILCPDSQQSMYCQLLCGLVERQHVLRIGAVFASAFLRSISFLEQHWRDLVNDI 242
>Os07g0576100 GH3 auxin-responsive promoter family protein
Length = 151
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 24 FERVTRDAANVQRETLRRILAENGGVEYLRGLGL-AGATDPATFRARVPLATHADLEPYI 82
E +T + VQ L IL N EYL GL A TD ATFRA+VP+A++ DL+PY+
Sbjct: 35 IEELTSNVDAVQERVLAEILGRNADAEYLDKCGLDASDTDRATFRAKVPVASYDDLKPYV 94
Query: 83 DRIADGDASPVLTAKPATSISLSSGTTQGKRKYL-LFNEELVK 124
RIA+GD SP+L+ P SSGT+ G+RK + + +E+ +
Sbjct: 95 KRIANGDRSPILSTHPIIEFFTSSGTSAGERKLMPIVTDEMAR 137
>Os05g0453600
Length = 124
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%)
Query: 21 IEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPATFRARVPLATHADLEP 80
+E E +TR VQ L ILA N G EYLR G+ G TD F+ARVP+ T+ DL P
Sbjct: 33 LEFIEEMTRGFYAVQERVLAAILARNNGTEYLRRHGMEGRTDREVFKARVPIVTYEDLRP 92
Query: 81 YIDRIADGDASPVLTAKPATSISLSSGTTQGK 112
I+R A+GD S ++++ P T S GK
Sbjct: 93 EIERTANGDRSNIISSHPITEFLTSPKRRDGK 124
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,518,970
Number of extensions: 588119
Number of successful extensions: 1510
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1477
Number of HSP's successfully gapped: 14
Length of query: 462
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 358
Effective length of database: 11,605,545
Effective search space: 4154785110
Effective search space used: 4154785110
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)