BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0178700 Os01g0178700|AK103147
(405 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0178700 Similar to Membrane associated protein with a ... 797 0.0
Os05g0179000 Zinc finger, RING-type domain containing protein 448 e-126
Os02g0787500 Zinc finger, RING-type domain containing protein 401 e-112
Os09g0323100 Zinc finger, RING-type domain containing protein 362 e-100
Os02g0674700 Zinc finger, RING-type domain containing protein 160 2e-39
Os04g0568900 Similar to RING finger protein 6 (RING-H2 prot... 139 3e-33
Os07g0463400 Similar to RES protein 124 1e-28
Os02g0735900 Zinc finger, RING-type domain containing protein 108 7e-24
Os01g0703300 Zinc finger, RING-type domain containing protein 74 2e-13
Os01g0213400 Zinc finger, RING-type domain containing protein 67 3e-11
Os05g0389600 Zinc finger, RING-type domain containing protein 65 8e-11
Os02g0832150 Zinc finger, RING-type domain containing protein 65 8e-11
>Os01g0178700 Similar to Membrane associated protein with a RING finger,
4xtransmembrane domain, transcripts identified by EST
Length = 405
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/405 (95%), Positives = 387/405 (95%)
Query: 1 MGDSGNASHRDHTIDILRNDATFPSTSHQDNHNNLDELHQTRGPLNDVPHVPESSASATP 60
MGDSGNASHRDHTIDILRNDATFPSTSHQDNHNNLDELHQTRGPLNDVPHVPESSASATP
Sbjct: 1 MGDSGNASHRDHTIDILRNDATFPSTSHQDNHNNLDELHQTRGPLNDVPHVPESSASATP 60
Query: 61 ASISRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQ 120
ASISRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQ
Sbjct: 61 ASISRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQ 120
Query: 121 WLIGYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVV 180
WLIGYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVV
Sbjct: 121 WLIGYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVV 180
Query: 181 DSGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLHDAPNLYRLCI 240
DSGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLHDAPNLYRLCI
Sbjct: 181 DSGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLHDAPNLYRLCI 240
Query: 241 VFLAFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKFQSKK 300
VFLAFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKFQSKK
Sbjct: 241 VFLAFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKFQSKK 300
Query: 301 FQDGEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDK 360
FQDGEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDK
Sbjct: 301 FQDGEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDK 360
Query: 361 WLKINALCPLCKADLGGSTNAPXXXXXXXXXXXXXXXXXXVESQQ 405
WLKINALCPLCKADLGGSTNAP VESQQ
Sbjct: 361 WLKINALCPLCKADLGGSTNAPDSSSRSSHDSNNSRVRNDVESQQ 405
>Os05g0179000 Zinc finger, RING-type domain containing protein
Length = 407
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/380 (59%), Positives = 273/380 (71%), Gaps = 23/380 (6%)
Query: 6 NASHRDHTIDILRNDATFPSTSHQDNHNNLDELHQTRGPLNDVPHVPESSASATPASISR 65
N H H +DI + + PSTS +DNHN D+L P + E S + S S+
Sbjct: 27 NTGHHAHAVDIPWDSS--PSTSRRDNHNGFDQL----------PRILEGSPGTSTPSNSQ 74
Query: 66 NASFARRD--QGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLI 123
N ARRD +G RQP+PLNSG WIS+EL+V++SQIIAAI VLSVSRNEHPH+PL +W+I
Sbjct: 75 NGPLARRDDNRGRRQPSPLNSGCWISVELVVNVSQIIAAICVLSVSRNEHPHSPLFEWVI 134
Query: 124 GYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSG 183
GYT+GC ATLPHLYWR+LHRN T QE T Q + E NSY V G+ V
Sbjct: 135 GYTVGCTATLPHLYWRYLHRNLPTTGQEPTVQNIPPNNTPEANSYGVT----GTNGVSRN 190
Query: 184 NNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLHDAPNLYRLCIVFL 243
N V +PR A FK+ALDCFFAVWFVVGNVW+FGG +S HDAPNLYRLCI FL
Sbjct: 191 NEATV----NPRFQAFADHFKMALDCFFAVWFVVGNVWVFGGHSSAHDAPNLYRLCIAFL 246
Query: 244 AFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKFQSKKFQD 303
F IGYA+PFILC +ICCCLPCIIS++G EDL+ NRGA+AE I+AL KF+SKK +D
Sbjct: 247 TFSCIGYAMPFILCALICCCLPCIISILGFREDLNQNRGASAETINALGTCKFKSKKTRD 306
Query: 304 GEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDKWLK 363
G+ E GV+AAGT+KER ISAEDAVCCICL+++ +N+DLRELPC H FH +CVDKWLK
Sbjct: 307 GDGNEVGVGVVAAGTNKERVISAEDAVCCICLARYVDNDDLRELPCAHFFHKDCVDKWLK 366
Query: 364 INALCPLCKADLGG-STNAP 382
INALCPLCKA++ G ST+AP
Sbjct: 367 INALCPLCKAEIDGVSTSAP 386
>Os02g0787500 Zinc finger, RING-type domain containing protein
Length = 342
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/332 (59%), Positives = 251/332 (75%), Gaps = 19/332 (5%)
Query: 53 ESSASATPASISRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNE 112
+S+++ +IS ++ RR HR +PLNSG WISIE++V++SQI+AAI VLS+SR E
Sbjct: 4 QSASTCFAGTISSWCTYVRR---HR--SPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKE 58
Query: 113 HPHAPLAQWLIGYTIGCVATLPHLYWRFLHRNRQNTEQES--TNQVSSERDVYEPNSYVV 170
HP APL +W+IGYT+GC ATLPHLYWR++HRN N E E T Q SS+ + EP
Sbjct: 59 HPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEPAHTLQGSSQNNSTEP----- 113
Query: 171 VSSAHGSEVVDSGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLH 230
SA SE + V +A+PR+ AL FK+ALDCFFAVWFVVGNVWIFGGR+S
Sbjct: 114 --SASASERRRNAARNAV--LANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGRSSAA 169
Query: 231 DAPNLYRLCIVFLAFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDA 290
DAPNLYRLCIVFL F IGYA+PFILC MICCCLPCIIS+MG ED + RGAT+E+I++
Sbjct: 170 DAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFREDTNNTRGATSESINS 229
Query: 291 LVAYKFQSKKFQDG---EAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLREL 347
L YKF++KK + EA +GG++AAGTDKER++SAEDAVCCICL+K+++N++LREL
Sbjct: 230 LPTYKFKTKKRRHSSGNEAEGQDGGIVAAGTDKERSLSAEDAVCCICLAKYAHNDELREL 289
Query: 348 PCNHVFHLECVDKWLKINALCPLCKADLGGST 379
PC H FH ECVDKWLKINALCPLCK+++ S+
Sbjct: 290 PCTHCFHKECVDKWLKINALCPLCKSEIASSS 321
>Os09g0323100 Zinc finger, RING-type domain containing protein
Length = 414
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 256/385 (66%), Gaps = 29/385 (7%)
Query: 11 DHTIDILRNDATFPSTSHQDNHNNLDELHQTRGPLNDVPH-VPESSASATPASI-SRNAS 68
+H I++ + STSHQD H++ D+ HQ P P+SSAS +P + +RN S
Sbjct: 11 EHAINVSHGETASTSTSHQDLHSDSDDSHQDDRPSTSTQTPSPQSSASTSPTAYNTRNLS 70
Query: 69 FARRDQ--GHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLIGYT 126
F RRD GH + + NSG WIS EL++ + QI+AAI VL SR+EHPHAPL W+IGYT
Sbjct: 71 FPRRDSMYGHGR-SIWNSGLWISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYT 129
Query: 127 IGCVATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNG 186
IGC+A++P + WR HRNR +EQE P +Y ++S+ SE + ++G
Sbjct: 130 IGCIASIPLICWRCAHRNRP-SEQEPEQ---------PPAAYPNLTSSQSSEGRNQRSSG 179
Query: 187 -----GVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLHD---APNLYRL 238
G I+ PR L FK A+DCFFAVWFVVGNVWIFGG ++L D APN+YRL
Sbjct: 180 TVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVGNVWIFGGHSTLSDSQEAPNMYRL 239
Query: 239 CIVFLAFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKFQ- 297
C+ FLA +GYA+PF++C ICCC PC+IS++ + EDL RGAT E IDAL YKF+
Sbjct: 240 CLAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQEDLGHTRGATQELIDALPTYKFKP 299
Query: 298 --SKKFQDGEAGEDN---GGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNHV 352
SK + D + +N GG+L GT KER +SAEDAVCCICL+K+ ++++LRELPC H
Sbjct: 300 KRSKMWVDHASSSENLSEGGILGPGTKKERIVSAEDAVCCICLTKYGDDDELRELPCTHF 359
Query: 353 FHLECVDKWLKINALCPLCKADLGG 377
FH++CVDKWLKINA+CPLCK ++GG
Sbjct: 360 FHVQCVDKWLKINAVCPLCKTEIGG 384
>Os02g0674700 Zinc finger, RING-type domain containing protein
Length = 379
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 170/328 (51%), Gaps = 29/328 (8%)
Query: 56 ASATPASISRNASFARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPH 115
A P+ + R A+ + ++ RQ + S ++++L+ +L+ I+ A VL++SR E P
Sbjct: 55 AMREPSLLVREAAADQLEE--RQADWAYSRPVVALDLLWNLAFILVAAAVLALSREESPS 112
Query: 116 APLAQWLIGYTIGCVATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAH 175
PL W++GY + CV + + + R Q+ E + ++++ + S
Sbjct: 113 MPLRLWIVGYAVQCVLHMACVAIEYRMRRGQSGE----SPMAADEETGTDGSSSSSDEDA 168
Query: 176 GSEVVDSGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWI-FGGRTSLHDAPN 234
G E G NG RIA + A F +W+++G W+ GG+ HDAP
Sbjct: 169 G-ERAPRGRNGDYVRIAKH--------LESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQ 219
Query: 235 LYRLCIVFLAFGFIGYALPF----ILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDA 290
LY LCIVFLAF I+ +CCCLPCII+++ D GA+ + I
Sbjct: 220 LYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQ 276
Query: 291 LVAYKFQSKKFQDGEA----GEDNGGVLAAGTDK--ERTISAEDAVCCICLSKFSNNEDL 344
+ YKF+ + ++ G G ++ GT++ E+ ++AEDA CCICLS + + +L
Sbjct: 277 IPRYKFRRMDEPEKQSVNMTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAEL 336
Query: 345 RELPCNHVFHLECVDKWLKINALCPLCK 372
RELPC H FH C+DKWL INA CPLCK
Sbjct: 337 RELPCGHHFHCVCIDKWLHINATCPLCK 364
>Os04g0568900 Similar to RING finger protein 6 (RING-H2 protein)
Length = 307
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 151/311 (48%), Gaps = 27/311 (8%)
Query: 76 HRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLIGYTIGCVATLPH 135
RQ + S ++++L+ +L+ I A VL +SR E PL W+ GY + CV +
Sbjct: 1 ERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRGEDSPMPLRTWVAGYALQCVVHMVC 60
Query: 136 LYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNGGVARIASPR 195
+ +R R+ + ER SS+ +V + G S
Sbjct: 61 V--AIEYRMRRGQRDRAPASADEER------GSDGSSSSSDDDVTEDDRRGSCTDCVS-- 110
Query: 196 VYALVACFKLALDCFFAVWFVVGNVWI-FGGRTSLHDAPNLYRLCIVFLAFGFIGYALPF 254
+ + A F +W+++G WI GG + DAP LY LCIVFLAF
Sbjct: 111 ---IAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCV 167
Query: 255 ----ILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKF----QSKKFQDGEA 306
I+ +CCCLPCII+++ D GA+ + I + YKF + +K E
Sbjct: 168 ALACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQTADET 224
Query: 307 GEDNGGVLAAGTDK--ERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDKWLKI 364
G G + GT++ E+ ++ EDA CCICLS + + +LRELPC H FH C+DKWL I
Sbjct: 225 GPFGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHI 284
Query: 365 NALCPLCKADL 375
NA CPLCK ++
Sbjct: 285 NATCPLCKFNI 295
>Os07g0463400 Similar to RES protein
Length = 361
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 103/184 (55%), Gaps = 14/184 (7%)
Query: 210 FFAVWFVVGNVWIFGGRTSL-HDAPNLYRLCIVFLAFGFIGYALPF----ILCTMICCCL 264
F +W+++G WI G +L HDAP LY L IVFLAF ++ +CCCL
Sbjct: 178 FSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCL 237
Query: 265 PCIISMMGIHEDLDFNRGATAEAIDALVAYKFQS----KKFQDGEAGEDNGGVLAAGTDK 320
PCII+++ D GA+ E I+ L +KF++ K G A G + GT+
Sbjct: 238 PCIIAILYAVTD---QEGASEEDINNLSKFKFRTMGDADKLVAGIAAPVGGVMTECGTNP 294
Query: 321 --ERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDKWLKINALCPLCKADLGGS 378
E +SAEDA CCICL + + +LRELPCNH FH C+DKWL INA CPLCK ++ S
Sbjct: 295 PVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHCTCIDKWLHINATCPLCKFNIIKS 354
Query: 379 TNAP 382
P
Sbjct: 355 NLGP 358
>Os02g0735900 Zinc finger, RING-type domain containing protein
Length = 157
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 14/161 (8%)
Query: 231 DAPNLYRLCIVFLAF----GFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAE 286
DAP LY L +VFLAF A+ + +CCCLPC+I+++ L GA+
Sbjct: 1 DAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAIL---YALAGQEGASDA 57
Query: 287 AIDALVAYKFQSKKFQDGEAGEDNGGVL-----AAGTDKERTISAEDAVCCICLSKFSNN 341
I L Y++ S +DG+ G D G ++ + + ER + EDA CCICLS + +
Sbjct: 58 DIGFLPRYRY-SDPSEDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAECCICLSSYEDG 116
Query: 342 EDLRELPCNHVFHLECVDKWLKINALCPLCKAD-LGGSTNA 381
+L LPCNH FH C+ KWL+++A CPLCK + L GS +A
Sbjct: 117 AELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSESA 157
>Os01g0703300 Zinc finger, RING-type domain containing protein
Length = 64
Score = 73.6 bits (179), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 38/45 (84%)
Query: 331 CCICLSKFSNNEDLRELPCNHVFHLECVDKWLKINALCPLCKADL 375
CCICL+++ E++R+LPC H+FHL+CVD+WL+I + CPLCK +L
Sbjct: 19 CCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 63
>Os01g0213400 Zinc finger, RING-type domain containing protein
Length = 237
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 326 AEDAVCCICLSKFSNNEDLRELP-CNHVFHLECVDKWLKINALCPLCKAD 374
A A C +CLS+ ++ E +RELP C HVFH+ECVD WL+ CPLC+A+
Sbjct: 124 ATAADCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAE 173
>Os05g0389600 Zinc finger, RING-type domain containing protein
Length = 549
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 325 SAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDKWLK-INALCPLCKADL 375
+ E A C ICL +++ + +R LPCNH FHL CVDKWLK I+ +CPLC+ D+
Sbjct: 486 TEEAAQCYICLVEYAEGDCVRILPCNHEFHLTCVDKWLKEIHRVCPLCRGDV 537
>Os02g0832150 Zinc finger, RING-type domain containing protein
Length = 217
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 25/100 (25%)
Query: 281 RGATAEAIDALVAYKFQSKKFQDGEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSN 340
+G +AIDAL F K+ Q + A C ICL++F+
Sbjct: 106 KGLKKKAIDALPTVSFALKQQQ------------------------QQAECAICLAEFAG 141
Query: 341 NEDLRELP-CNHVFHLECVDKWLKINALCPLCKADLGGST 379
E+LR LP C H FH+ C+D WL +A CP C+A +G ST
Sbjct: 142 GEELRLLPHCGHAFHVSCIDTWLGTHATCPSCRATVGTST 181
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,095,286
Number of extensions: 598188
Number of successful extensions: 2168
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 2246
Number of HSP's successfully gapped: 16
Length of query: 405
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 302
Effective length of database: 11,657,759
Effective search space: 3520643218
Effective search space used: 3520643218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)