Os07g0463400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to RES protein.
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Os07g0463400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to RES protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.48 | 0.185 | 11.1 | 0.782 | 0.0101 | 0.184 | -0.486 | 0.0156 | 0.211 | 9.3 | 1010 | 10021 | -- | -- |
| 15.41 | 0.183 | 11.1 | 0.787 | 0.0151 | 0.19 | 0.53 | -- | 0.208 | 20.6 | 1008 | 11372 | -- | -- |
| 15.94 | 0.186 | 11 | 0.824 | 0.0818 | 0.252 | -- | -0.061 | 0.249 | 14.1 | 1008 | 11461 | -- | -- |
| 15.71 | 0.185 | 11.1 | 0.752 | 0.102 | 0.238 | -- | -- | 0.189 | 15.4 | 1005 | 11483 | -- | -- |
| 16.18 | 0.187 | 11.1 | 0.742 | -- | 0.223 | -- | 0.0251 | 0.178 | -- | 1005 | 11038 | -- | -- |
| 16.9 | 0.193 | 11.1 | 0.707 | 0.00186 | -- | 0.499 | -- | 0.157 | 20.8 | -- | -- | -- | -- |
| 17.21 | 0.194 | 11.1 | 0.694 | 0.0968 | -- | -- | -- | 0.159 | 15.2 | -- | -- | -- | -- |
| 16.08 | 0.187 | 11.1 | 0.754 | -- | 0.28 | -- | -- | 0.16 | -- | 998.6 | 10812 | -- | -- |
| 29.79 | 0.254 | 11.1 | -- | 0.0809 | 0.0789 | -- | -- | 0.0847 | 14.4 | 1001 | 11486 | -- | -- |
| 17.74 | 0.197 | 11.1 | 0.69 | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
| 29.91 | 0.256 | 11.1 | -- | 0.0831 | -- | -- | -- | 0.0819 | 15.2 | -- | -- | -- | -- |
| 24.44 | 0.23 | 11.1 | -- | -- | -0.422 | -- | -- | -0.00156 | -- | 1015 | 47520 | -- | -- |
| 30.3 | 0.257 | 11.1 | -- | -- | -- | -- | -- | 0.0801 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.98 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 2 | 15.05 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 3 | 15.06 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 4 | 15.12 | humidity | 50.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 5 | 15.12 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 6 | 15.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 7 | 15.14 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 8 | 15.14 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 15 | 15.17 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 27 | 15.18 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 51 | 15.19 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 74 | 15.20 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 19 |
| 82 | 15.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 99 | 15.21 | humidity | 50.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 117 | 15.21 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 165 | 15.23 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 234 | 15.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 235 | 15.25 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 237 | 15.25 | atmosphere | 995.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 273 | 15.26 | atmosphere | 995.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 281 | 15.26 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 323 | 15.27 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 6 |
| 328 | 15.27 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 383 | 15.28 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 414 | 15.28 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 436 | 15.29 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 460 | 15.29 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 593 | 15.31 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 690 | 15.32 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 809 | 15.33 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 811 | 15.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 815 | 15.33 | atmosphere | 995.0 | 14400 | > th | dose dependent | no | NA | NA |
| 818 | 15.33 | atmosphere | 1015.0 | 14400 | < th | dose dependent | no | NA | NA |
| 936 | 15.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |