BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0569500 Os12g0569500|AK066624
(233 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0569500 Thaumatin, pathogenesis-related family protein 416 e-117
Os12g0569300 Thaumatin, pathogenesis-related family protein 226 1e-59
Os12g0568900 Thaumatin, pathogenesis-related family protein 191 4e-49
Os11g0703100 Thaumatin, pathogenesis-related family protein 190 8e-49
Os11g0703000 Thaumatin, pathogenesis-related family protein 166 1e-41
Os01g0839900 Thaumatin, pathogenesis-related family protein 87 7e-18
Os06g0691200 Similar to Thaumatin-like protein precursor 75 4e-14
Os09g0498300 74 7e-14
Os03g0244200 Similar to Thaumatin-like protein 69 2e-12
Os09g0536300 Similar to Thaumatin-like protein 69 3e-12
Os03g0663400 Similar to Thaumatin-like protein 66 2e-11
Os09g0536400 Similar to Thaumatin-like protein 1 precursor 66 2e-11
Os12g0630500 Similar to Thaumatin-like protein 65 5e-11
>Os12g0569500 Thaumatin, pathogenesis-related family protein
Length = 233
Score = 416 bits (1069), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/233 (90%), Positives = 210/233 (90%)
Query: 1 MANKLQLXXXXXXXXXXXXXXXXXXXXXXXPMLTMHNLCPYTVWPIVSPDSGSPPIADGI 60
MANKLQL PMLTMHNLCPYTVWPIVSPDSGSPPIADGI
Sbjct: 1 MANKLQLAIAFVVVVVVLGAMAASAAAAVAPMLTMHNLCPYTVWPIVSPDSGSPPIADGI 60
Query: 61 RLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDGGRCDTGNAPPATVVRLSFNGAGGLAEYS 120
RLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDGGRCDTGNAPPATVVRLSFNGAGGLAEYS
Sbjct: 61 RLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDGGRCDTGNAPPATVVRLSFNGAGGLAEYS 120
Query: 121 VNLGEGFNVPTVVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASY 180
VNLGEGFNVPTVVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASY
Sbjct: 121 VNLGEGFNVPTVVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASY 180
Query: 181 FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFCQAAMVAGEPELIRTVDVADN 233
FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFCQAAMVAGEPELIRTVDVADN
Sbjct: 181 FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFCQAAMVAGEPELIRTVDVADN 233
>Os12g0569300 Thaumatin, pathogenesis-related family protein
Length = 233
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 154/205 (75%), Gaps = 11/205 (5%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIA-DGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRD 91
LT+HNLCPY VWP+V+P++G P I+ + RL+G G GL S + PA FW+GRVV RT C
Sbjct: 27 LTLHNLCPYPVWPLVTPNTGFPSISGNTARLDGGGRGLVSYDFPASFWAGRVVARTGCGG 86
Query: 92 GG---RCDTGNAPPATVVRL---SFNGAGGLAEYSVNLGEGFNVPTVVSPHAI-GGGMCP 144
GG RC+TGNAPPATVV+L S GA LA YSV+L +GFNVP VVSP AI GGG CP
Sbjct: 87 GGGLVRCETGNAPPATVVQLVVHSPEGAQDLAAYSVSLVDGFNVPAVVSPQAIAGGGQCP 146
Query: 145 ALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQRCPLTRTGGGDVEPVPQHCIS 204
ALGC ADLNAGC QRV GG VVACRG A YFK RCPLTRT G DVEPVPQHC++
Sbjct: 147 ALGCAADLNAGCPRSQRV--VGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLA 204
Query: 205 PGEIKLVFCQAAMVAGE-PELIRTV 228
PGE+K+VFCQ +MVA PELIRTV
Sbjct: 205 PGELKVVFCQPSMVAAAVPELIRTV 229
>Os12g0568900 Thaumatin, pathogenesis-related family protein
Length = 230
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 126/206 (61%), Gaps = 18/206 (8%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDG 92
LT+ NLCP+ VWP+V+P SG P + RL+ L SL P WSGRV RT C
Sbjct: 29 LTIQNLCPHPVWPLVTPTSGQPISDNTARLDPNS--LISLAFPPTPWSGRVAARTGCDAA 86
Query: 93 GR----CDTGNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPHAIGGGMCPALGC 148
C+TG +PP+TV +LS +G G +A YSV+L +GFNVP VVSP A+GGG CPALGC
Sbjct: 87 ASPPAGCETGASPPSTVAQLSVHGGGDVATYSVSLVDGFNVPVVVSPQAVGGGQCPALGC 146
Query: 149 TADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQRCPLTRTGGGDVEPVPQHCISPGEI 208
DLN C GQR G ACRGP YFK RCP TRT GDVEPVPQ C SPGE+
Sbjct: 147 VVDLNCDCPLGQRFSDG------AACRGPPEYFKGRCPQTRTTPGDVEPVPQSCRSPGEL 200
Query: 209 KLVFCQAAMVAGEPE------LIRTV 228
K++FC M+ LIRTV
Sbjct: 201 KVIFCPPTMLTAAAAAAASDMLIRTV 226
>Os11g0703100 Thaumatin, pathogenesis-related family protein
Length = 206
Score = 190 bits (482), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 118/184 (64%), Gaps = 15/184 (8%)
Query: 35 MHNLCPYTVWPIVSPDSGSPPIADG---IRLEGRGVGLRSLNLPAGF-WSGRVVPRTWCR 90
MHNLCPYTVWP+V+P++G P I G IRL+ G L SL PA WSGRVVPRT C
Sbjct: 30 MHNLCPYTVWPLVTPNAGQPAIITGGATIRLDPNG--LASLAFPAAAGWSGRVVPRTGCT 87
Query: 91 DGGRCDTGNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPHAIGGGM-CPALGCT 149
C TG+APPATV ++S N AGGLAEYSV+L +GFNVP ++PHA G CP LGC
Sbjct: 88 GAATCATGDAPPATVAQVSVNAAGGLAEYSVSLVDGFNVPATITPHAFDGSQTCPVLGCA 147
Query: 150 ADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQRCPLTRTGGGDVEPVPQHCISPGEIK 209
AD+NA C A RV G CR +FK+ CP RT DVE PQ C PGE+K
Sbjct: 148 ADINAACPADARVGAG--------CRASPQFFKEMCPEARTTATDVEATPQKCFGPGELK 199
Query: 210 LVFC 213
+VFC
Sbjct: 200 VVFC 203
>Os11g0703000 Thaumatin, pathogenesis-related family protein
Length = 212
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 117/185 (63%), Gaps = 14/185 (7%)
Query: 36 HNLCPYTVWPIVSPDSGSPPIADG----IRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRD 91
HNLC + VWP+V+ ++G P IAD RL+G G GL +L P G WSGRVV RT CR
Sbjct: 26 HNLCTHPVWPLVTANAGLPAIADAAGAATRLDGNGDGLATLAFPPGAWSGRVVARTGCRG 85
Query: 92 GG--RCDTGNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPHAIGGG-MCPALGC 148
G RCDTG+APP TV ++S +GAGGLAEYSV+L +GFNV VV+PH G +CP+LGC
Sbjct: 86 NGSSRCDTGDAPPVTVAQVSVHGAGGLAEYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGC 145
Query: 149 TADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQRCPLTRTGGGDVEPVPQHCISPGEI 208
DL A C GD G G A FK RCP TRT DVE PQ CI P E+
Sbjct: 146 AVDLAADCP-------GDGGRGGCMAAGQAEAFKARCPDTRTTPTDVEVTPQRCIQPAEL 198
Query: 209 KLVFC 213
K+VFC
Sbjct: 199 KVVFC 203
>Os01g0839900 Thaumatin, pathogenesis-related family protein
Length = 247
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 98/231 (42%), Gaps = 56/231 (24%)
Query: 31 PM-LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGL-----RSLNLPAGFWSGRVV 84
PM LT+ N CPY VWP + +SG LEG G L RS PA WSGR+
Sbjct: 26 PMTLTIVNNCPYPVWPGIQANSGHD------VLEGGGFFLPALSHRSFAAPAHPWSGRIW 79
Query: 85 PRTWCRDGG---RCDTGN------------APPATVVRLSFNGAGGLAEYSVNLGEGFNV 129
RT C G C TG+ A PAT+ ++S + Y V++ +GFNV
Sbjct: 80 ARTGCTGAGAQLHCATGDCGGRLQCAGLGGAAPATLAQVSLHHGNDQTSYGVSVVDGFNV 139
Query: 130 PTVVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRG------------- 176
V+PH G G CP L C +L C + ++ G VVAC+
Sbjct: 140 GLSVTPHE-GRGNCPVLACRKNLTETCPSELQLR--TPAGSVVACKSGCEAFRTDELCCR 196
Query: 177 -------------PASYFKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFCQ 214
+ +FK+ CP T D + C +P E+K++FC
Sbjct: 197 NMYNSPRTCRSSKYSEFFKRECPQAFTYAHDSPSLTHECAAPRELKVIFCH 247
>Os06g0691200 Similar to Thaumatin-like protein precursor
Length = 251
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADG-IRLE-GRGVGLRSLNLPAGFWSGRVVPRTWCR 90
L ++N C TVWP + P +G +A G +L R +R LPAG WSGRV R C
Sbjct: 26 LALYNRCAETVWPGIQPSAGKELLARGGFQLAPNRATSIR---LPAG-WSGRVWGRQGCS 81
Query: 91 DG----GRCDTGN------------APPATVVRLSFNGAGGLAE-YSVNLGEGFNVPTVV 133
GRC TG+ APPAT+ ++ + Y V+L +G+N+P +
Sbjct: 82 FDAAGRGRCATGDCGGALYCNGAGGAPPATLAEITLASTPAAQDFYDVSLVDGYNIPIAM 141
Query: 134 SPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYF 181
+P G C GC +DLN C AG V GG VV CR + +
Sbjct: 142 TPSHGSGANCVPAGCISDLNRVCPAGLAVRGGGGDNRVVGCRSACAAY 189
>Os09g0498300
Length = 331
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIAD-GIRLEGRGVGLRSLNLPAGFWSGRVVPRTWC-- 89
T+ N C + +WP +G+P ++ G RL+ L PAG WSGR+ RT C
Sbjct: 29 FTIANYCSHPIWPGTLAGAGTPQLSTTGFRLDPGQTA--QLAAPAG-WSGRIWARTGCVF 85
Query: 90 -RDG-GRCDTGN------------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSP 135
DG G C TG+ APPAT+ ++ GG Y V+L +G+N+P V P
Sbjct: 86 DADGAGVCQTGDCGGRVECRGAGAAPPATLFEVTLGRGGGEDFYDVSLVDGYNLPVVAIP 145
Query: 136 HAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQ 183
A C A GC ADLN C +V G GG +ACR F Q
Sbjct: 146 RA--AAACNATGCMADLNRSCPRELQVECG--GGGAIACRSACEAFGQ 189
>Os03g0244200 Similar to Thaumatin-like protein
Length = 332
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 30/158 (18%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDG 92
TM N C YTVWP + +G+ P++ G +++ PA WSGR+ RT C +
Sbjct: 27 FTMTNNCGYTVWPGLLSGAGTAPLSTTGFALAHGAS-ATVDAPAS-WSGRMWARTLCAED 84
Query: 93 GR----CDTGN-------------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSP 135
C TG+ APPAT++ + +G+GG+ + V+L +G+N+P ++ P
Sbjct: 85 ATGKFTCATGDCGSGGIQCNGGGAAPPATLMEFTLDGSGGMDFFDVSLVDGYNLPMIIVP 144
Query: 136 HAIGGGM-----------CPALGCTADLNAGCAAGQRV 162
G C A GC DLN C A RV
Sbjct: 145 QGGGAAAPAGSGGGSGGKCMATGCLVDLNGACPADLRV 182
>Os09g0536300 Similar to Thaumatin-like protein
Length = 330
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWC--R 90
T+ N C YTVWP + +GSPP+A G L +++ PA WSGRV RT C
Sbjct: 25 FTLTNSCAYTVWPGLLSSAGSPPLATTGFALAPGESL-AVDAPAA-WSGRVWGRTLCGAD 82
Query: 91 DGGR----CDTGN-------------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVV 133
GG C TG+ APPAT+ + +GAGG Y V+L +G N+P VV
Sbjct: 83 PGGSGRFACATGDCGSGAVECGGGGAAPPATLAEFTLDGAGGNDFYDVSLVDGSNLPMVV 142
Query: 134 SPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYF 181
P G A GC DLN C A +V G D G +ACR F
Sbjct: 143 VPQGGGAAC-GATGCLVDLNGPCPADLKVAGADGAG--IACRSACEAF 187
>Os03g0663400 Similar to Thaumatin-like protein
Length = 222
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLE-GRGVGLRSLNLPAGFWSGRVVPRTWCR- 90
T+ N C YTVWP P DG +L+ G+ ++ +PAG RV RT C
Sbjct: 27 FTIVNKCGYTVWPAALPS------GDGNQLDPGQSW---AVYVPAGTKGARVWGRTGCGF 77
Query: 91 ----DGGRCDTGN-----------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSP 135
G+C TG+ APP TV S A + ++L +GFN P + P
Sbjct: 78 ISGGSLGQCQTGDCGGTLRCAAVGAPPVTVAEFSLGQASKDDYFDISLVDGFNAPMAIVP 137
Query: 136 HAIGGGMCPALG--CTADLNAGCAAGQRVYGGDTGGDVVACRGPAS--------YFKQRC 185
A GG CP G C A++ C R G + CRG ++ +FK+ C
Sbjct: 138 AAAGGRRCPRGGPRCAAEITLQCPGELRAKAGCSN----PCRGNSTCGPTKDTEFFKKLC 193
Query: 186 PLTRTGGGDVEPVPQHCISPGEIKLVFC 213
P T T D + C + + ++VFC
Sbjct: 194 PETVTYARDGQGTTFTCPAGTDYQIVFC 221
>Os09g0536400 Similar to Thaumatin-like protein 1 precursor
Length = 312
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCR-- 90
T N C TVWP V +SGS + G G RSL PAG WSGR RT C
Sbjct: 34 FTFTNRCGGTVWPGVLSNSGSSALGTTGFALGAGE-TRSLAAPAG-WSGRFWARTGCTFD 91
Query: 91 -DG-GRCDTGN-------------APPATVVRLSFNGAGGLAE--YSVNLGEGFNVPTVV 133
DG G C TG+ PPAT+V + GG + Y V+L +G+N+P VV
Sbjct: 92 DDGKGTCATGDCGSGEVECRGAGATPPATLVEFTLGSGGGGGKDYYDVSLVDGYNLPMVV 151
Query: 134 SPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYF 181
A G CPA GC DLN C A + G ACR F
Sbjct: 152 EAAAAG---CPATGCVVDLNQRCPAELKAGHGQ------ACRSACEAF 190
>Os12g0630500 Similar to Thaumatin-like protein
Length = 258
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 98/231 (42%), Gaps = 49/231 (21%)
Query: 32 MLTMHNLCPYTVWPIVSPDSGSPPIADGIRLE-GRGVGLRSLNLPAGFWSGRVVPRTWCR 90
+TM N C YTVWP P G+ RL+ G+ S+++ AG + R+ PRT C
Sbjct: 32 TITMVNRCSYTVWPGALPGGGA-------RLDPGQSW---SISVAAGTPAARIWPRTGCS 81
Query: 91 -DG---GRCDTGN-----------APPATVVRLSFN--GAGGLAEYSVNLGEGFNVPTVV 133
DG GRC TG+ PP T+ + GAGG ++L +GFNVP
Sbjct: 82 FDGAGRGRCATGDCAGALSCAVSGEPPTTLAEYTLGRPGAGGDDFLDLSLIDGFNVPVSF 141
Query: 134 SPHAIGGGMCPA---LGCTADLNAGCAAGQRVYG------GDTGGDVVACRG-------P 177
P GG C C D+ A C RV G G GGD CRG P
Sbjct: 142 QPANGGGARCSKGRGPSCAVDITARCLPELRVPGGCASACGKFGGDTYCCRGRFEHVCPP 201
Query: 178 ASY---FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFC--QAAMVAGEPE 223
SY FK CP + D + C + ++ FC + + AG+ +
Sbjct: 202 TSYSMFFKGLCPDAYSYAKDDQTSTFTCPAGTNYRVDFCPPTSGVTAGDED 252
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.140 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,715,773
Number of extensions: 551507
Number of successful extensions: 1284
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1241
Number of HSP's successfully gapped: 24
Length of query: 233
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 135
Effective length of database: 11,918,829
Effective search space: 1609041915
Effective search space used: 1609041915
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)