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Os03g0663400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Thaumatin-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0501) R2 : 0.541
β1 : 0.479 (0.225) R2dD : 0.00782 R2D : -0.0635
β2 : 2.1 (0.115) R2dC : 0.34 R2C : 0.289
β3 : 0.724 (0.238) R2dE : 0.013 R2E : -0.00892
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.38 (0.945) R2dD*E : 0.112 R2D*E : 0.0768
γ1 : 1.01 (0.104) R2dN8 : 0.131 R2N8 : 0.0682
σ : 0.894
deviance : 368.37
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C
peak time of C : 22.6
E
wheather : atmosphere
threshold : 1011
memory length : 11987
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
359.74 0.891 9.6 0.566 2.11 0.686 1.46 7.51 1.01 22.5 1011 11745 -- --
391.84 0.922 9.72 -0.431 2.2 1.7 1.8 -- 0.904 22.4 1000 11357 -- --
368.37 0.894 9.6 0.479 2.1 0.724 -- 7.38 1.01 22.6 1011 11987 -- --
397.12 0.928 9.69 -0.639 2.14 1.71 -- -- 0.963 22.6 1000 11461 -- --
639.4 1.18 9.55 0.579 -- 0.559 -- 8.13 1.01 -- 1010 12176 -- --
458.85 1 9.73 -0.238 2.13 -- 1.4 -- 0.81 22.5 -- -- -- --
466.83 1.01 9.73 -0.295 2.12 -- -- -- 0.805 22.6 -- -- -- --
676.49 1.21 9.64 -0.585 -- 1.69 -- -- 0.966 -- 1000 11126 -- --
407.23 0.94 9.68 -- 2.13 1.56 -- -- 1.01 22.6 1000 11430 -- --
743.17 1.27 9.68 -0.256 -- -- -- -- 0.815 -- -- -- -- --
469.13 1.01 9.72 -- 2.12 -- -- -- 0.838 22.6 -- -- -- --
684.98 1.22 9.63 -- -- 1.56 -- -- 1.02 -- 1000 11116 -- --
744.91 1.27 9.67 -- -- -- -- -- 0.844 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 362.25 wind 3 14400 > th dose dependent rect. 15 6
2 362.43 radiation 1 14400 < th dose dependent rect. 22 4
3 362.64 wind 5 14400 < th dose independent rect. 14 17
4 362.64 wind 3 14400 > th dose dependent rect. 14 8
6 363.10 wind 5 14400 > th dose dependent rect. 15 4
11 363.85 radiation 1 14400 < th dose dependent rect. 24 2
12 363.98 wind 3 14400 > th dose dependent rect. 17 2
17 364.70 wind 5 14400 < th dose independent rect. 15 5
19 364.75 wind 5 14400 > th dose independent rect. 15 5
21 364.85 wind 5 14400 < th dose independent rect. 14 8
23 365.05 wind 5 14400 > th dose independent rect. 14 17
27 365.72 wind 3 14400 > th dose dependent rect. 14 15
28 365.81 wind 5 14400 > th dose independent rect. 14 8
70 367.70 radiation 1 14400 < th dose dependent rect. 20 6
89 368.35 atmosphere 995 14400 > th dose independent rect. 9 4
97 368.68 atmosphere 995 14400 > th dose independent rect. 6 9
103 368.80 atmosphere 995 14400 < th dose dependent rect. 5 11
108 368.93 atmosphere 995 14400 < th dose independent rect. 5 11
112 369.00 atmosphere 995 14400 > th dose independent rect. 5 11
116 369.11 atmosphere 995 14400 < th dose dependent rect. 14 8
135 369.41 atmosphere 995 14400 < th dose independent rect. 14 8
161 369.62 atmosphere 995 14400 > th dose independent rect. 13 9
165 369.66 atmosphere 995 14400 > th dose independent rect. 10 12
168 369.69 atmosphere 995 14400 > th dose independent rect. 8 14
171 369.75 atmosphere 995 14400 < th dose independent sin 22 NA
181 369.86 atmosphere 995 14400 > th dose independent sin 22 NA
209 370.36 atmosphere 995 14400 > th dose independent rect. 11 2
213 370.46 atmosphere 995 14400 < th dose dependent sin 22 NA
220 370.53 atmosphere 1005 14400 < th dose independent rect. 5 2
244 370.85 temperature 30 43200 > th dose independent rect. 8 1
264 370.99 temperature 30 43200 > th dose dependent rect. 8 1
280 371.02 atmosphere 1005 14400 > th dose independent rect. 5 3
286 371.04 atmosphere 1005 14400 > th dose independent rect. 6 1
295 371.08 humidity 70 43200 > th dose independent rect. 15 2
393 371.82 wind 5 14400 < th dose independent rect. 15 1
415 371.96 temperature 30 43200 < th dose independent rect. 7 2
441 372.19 humidity 70 43200 < th dose independent rect. 14 3
445 372.24 temperature 30 43200 < th dose independent rect. 22 11
458 372.30 temperature 30 43200 < th dose independent rect. 5 4
468 372.35 wind 5 14400 > th dose independent rect. 15 1
481 372.42 temperature 30 43200 < th dose independent rect. 24 9
611 373.17 radiation 10 43200 > th dose independent rect. 14 1
743 373.69 atmosphere 995 14400 > th dose independent no NA NA
751 373.70 atmosphere 995 14400 > th dose independent rect. 12 23
752 373.70 atmosphere 995 14400 > th dose independent rect. 14 23
762 373.76 atmosphere 1010 14400 < th dose dependent rect. 3 1
766 373.81 wind 3 14400 > th dose dependent sin 16 NA
769 373.82 atmosphere 1005 14400 < th dose dependent rect. 5 1
857 374.32 atmosphere 995 14400 < th dose independent no NA NA
922 374.60 atmosphere 1000 14400 < th dose dependent rect. 24 2
952 374.95 atmosphere 1000 14400 < th dose dependent rect. 20 1
961 375.01 atmosphere 1000 14400 < th dose dependent rect. 20 7
967 375.06 wind 5 14400 < th dose independent sin 15 NA
997 375.24 atmosphere 1000 14400 < th dose dependent rect. 20 12