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Os11g0703000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Thaumatin, pathogenesis-related family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.24 (0.0236) R2 : 0.879
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.55 (0.0617) R2dC : 0.883 R2C : 0.876
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.134 (0.0496) R2dN8 : 0.00252 R2N8 : -0.00373
σ : 0.444
deviance : 90.15
__
_____
C
peak time of C : 5.92
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.17 0.415 8.21 0.169 3.06 1.37 -0.0693 0.114 -0.0663 7.7 0.0402 259 -- --
78.24 0.412 8.21 0.172 3.07 1.37 -0.103 -- -0.0653 7.7 0.04002 259 -- --
78.18 0.412 8.21 0.167 3.07 1.37 -- 0.125 -0.0673 7.7 0.05004 259 -- --
78.27 0.412 8.21 0.17 3.07 1.37 -- -- -0.0657 7.7 0.05243 259 -- --
115.98 0.502 8.32 0.586 -- 4.34 -- 0.807 0.166 -- 0.13 736 -- --
89.97 0.445 8.24 0.021 3.55 -- 0.261 -- -0.131 5.92 -- -- -- --
90.13 0.445 8.24 0.0231 3.55 -- -- -- -0.132 5.92 -- -- -- --
114.11 0.498 8.31 0.456 -- 4.32 -- -- 0.0738 -- 0.1363 731 -- --
79.02 0.414 8.22 -- 3.06 1.36 -- -- -0.0828 7.67 0.06 260 -- --
743.71 1.27 8.3 0.129 -- -- -- -- -0.0497 -- -- -- -- --
90.15 0.444 8.24 -- 3.55 -- -- -- -0.134 5.92 -- -- -- --
115.33 0.5 8.28 -- -- 4.34 -- -- 0.00358 -- 1.355 732 -- --
744.15 1.27 8.3 -- -- -- -- -- -0.0641 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.34 wind 7.0 270 < th dose independent rect. 18 11
3 70.45 radiation 10.0 270 < th dose dependent rect. 18 11
5 70.53 radiation 10.0 270 < th dose independent rect. 18 11
7 70.54 temperature 15.0 270 > th dose independent rect. 5 13
9 70.59 temperature 10.0 270 > th dose independent rect. 18 11
10 70.59 humidity 50.0 270 > th dose independent rect. 18 11
15 70.59 atmosphere 1015.0 270 < th dose independent rect. 5 13
17 70.70 humidity 50.0 10 > th dose independent rect. 16 19
20 70.97 wind 9.0 270 < th dose independent rect. 5 13
21 71.20 atmosphere 995.0 270 > th dose independent rect. 18 11
24 71.31 radiation 20.0 90 < th dose dependent rect. 20 19
25 71.41 precipitation 0.1 270 < th dose independent rect. 5 13
26 71.41 precipitation 0.1 270 < th dose dependent rect. 5 13
33 71.88 precipitation 0.1 270 < th dose independent rect. 18 11
34 71.88 precipitation 0.1 270 < th dose dependent rect. 18 11
38 72.12 humidity 50.0 10 > th dose independent rect. 16 4
40 72.17 radiation 20.0 90 < th dose dependent rect. 20 11
43 72.22 temperature 30.0 270 < th dose independent rect. 19 10
61 72.41 radiation 1.0 270 < th dose dependent rect. 18 17
67 72.67 radiation 20.0 270 < th dose dependent sin 12 NA
73 72.85 radiation 30.0 10 < th dose dependent rect. 20 11
84 73.08 temperature 15.0 10 > th dose independent rect. 20 11
89 73.19 temperature 15.0 10 > th dose independent rect. 20 20
92 73.20 humidity 50.0 270 > th dose dependent rect. 10 3
95 73.28 humidity 50.0 270 > th dose dependent rect. 11 1
100 73.32 radiation 10.0 10 < th dose independent rect. 16 4
104 73.36 radiation 1.0 270 > th dose independent rect. 14 19
110 73.44 humidity 50.0 30 > th dose dependent rect. 11 5
116 73.59 temperature 15.0 90 > th dose independent rect. 7 13
120 73.63 temperature 30.0 30 < th dose independent rect. 11 5
121 73.63 radiation 1.0 270 < th dose independent rect. 19 16
123 73.66 radiation 1.0 270 > th dose independent rect. 15 17
125 73.67 temperature 10.0 10 > th dose independent rect. 11 5
127 73.67 atmosphere 1015.0 10 < th dose independent rect. 11 5
128 73.67 precipitation 0.1 10 < th dose independent rect. 11 5
129 73.67 temperature 10.0 10 > th dose independent rect. 16 19
130 73.67 precipitation 0.1 10 < th dose dependent rect. 11 5
131 73.70 wind 1.0 10 > th dose independent rect. 11 5
132 73.70 radiation 10.0 90 < th dose independent rect. 20 19
134 73.71 radiation 1.0 270 > th dose dependent rect. 15 18
138 73.79 atmosphere 995.0 10 > th dose independent rect. 11 5
146 73.89 temperature 30.0 270 < th dose independent rect. 11 1
154 73.92 wind 9.0 30 < th dose independent rect. 16 19
155 73.92 atmosphere 995.0 10 > th dose dependent rect. 11 5
166 74.03 temperature 10.0 1440 > th dose independent rect. 12 5
171 74.03 temperature 10.0 1440 > th dose independent rect. 17 19
174 74.03 atmosphere 1015.0 10 < th dose independent rect. 16 19
182 74.11 radiation 20.0 10 < th dose dependent rect. 20 18
188 74.14 radiation 1.0 90 > th dose independent rect. 10 6
189 74.14 radiation 1.0 270 > th dose independent rect. 13 21
191 74.15 radiation 20.0 10 < th dose dependent rect. 16 4
203 74.23 temperature 10.0 270 > th dose independent rect. 22 11
204 74.23 humidity 50.0 270 > th dose independent rect. 22 11
205 74.23 atmosphere 995.0 270 > th dose independent rect. 22 11
206 74.23 temperature 10.0 270 > th dose independent rect. 9 13
209 74.25 atmosphere 995.0 10 > th dose independent rect. 16 19
210 74.25 atmosphere 995.0 270 > th dose dependent rect. 10 3
212 74.27 wind 9.0 30 < th dose independent rect. 11 5
213 74.27 temperature 30.0 30 < th dose independent rect. 20 20
215 74.28 wind 9.0 270 < th dose independent rect. 22 11
216 74.29 radiation 20.0 270 < th dose independent rect. 16 1
233 74.33 humidity 60.0 30 > th dose independent rect. 11 5
234 74.36 temperature 20.0 270 > th dose independent rect. 15 2
236 74.36 wind 9.0 10 < th dose independent rect. 7 13
239 74.37 radiation 10.0 10 < th dose independent rect. 20 11
246 74.39 temperature 30.0 10 < th dose independent rect. 20 11
247 74.39 humidity 50.0 10 > th dose independent rect. 20 11
250 74.39 atmosphere 995.0 10 > th dose independent rect. 20 11
254 74.39 temperature 10.0 10 > th dose independent rect. 7 13
256 74.39 atmosphere 1015.0 10 < th dose independent rect. 7 13
261 74.39 atmosphere 995.0 270 > th dose dependent rect. 11 1
262 74.39 humidity 50.0 30 > th dose dependent rect. 20 20
264 74.41 wind 9.0 10 < th dose independent rect. 20 11
291 74.50 temperature 10.0 270 > th dose independent rect. 10 3
292 74.50 atmosphere 995.0 270 > th dose independent rect. 10 3
293 74.50 atmosphere 1015.0 270 < th dose independent rect. 10 3
295 74.50 temperature 10.0 270 > th dose independent rect. 13 21
296 74.50 atmosphere 995.0 10 > th dose dependent rect. 16 4
298 74.51 precipitation 0.1 30 < th dose independent rect. 16 19
299 74.51 radiation 1.0 270 > th dose dependent sin 12 NA
300 74.51 precipitation 0.1 30 < th dose dependent rect. 16 19
306 74.54 precipitation 0.1 270 < th dose independent rect. 10 3
307 74.54 precipitation 0.1 10 < th dose independent rect. 20 11
309 74.54 precipitation 0.1 270 < th dose dependent rect. 10 3
311 74.54 precipitation 0.1 10 < th dose dependent rect. 20 11
315 74.56 humidity 50.0 270 > th dose independent rect. 10 3
318 74.59 radiation 1.0 270 > th dose independent rect. 10 3
332 74.61 atmosphere 1015.0 90 < th dose independent rect. 7 13
335 74.62 precipitation 0.1 10 < th dose independent rect. 7 13
336 74.62 precipitation 0.1 10 < th dose dependent rect. 7 13
339 74.66 humidity 90.0 270 < th dose independent rect. 15 2
355 74.70 wind 1.0 270 > th dose independent rect. 10 3
357 74.72 precipitation 0.1 10 < th dose independent rect. 20 20
358 74.72 wind 1.0 270 > th dose dependent rect. 15 3
360 74.72 precipitation 0.1 10 < th dose dependent rect. 20 20
366 74.78 atmosphere 1000.0 10 > th dose independent rect. 16 4
372 74.80 temperature 10.0 270 > th dose independent rect. 14 19
379 74.85 atmosphere 995.0 270 > th dose independent rect. 5 13
382 74.86 temperature 10.0 270 > th dose independent rect. 11 1
383 74.86 atmosphere 995.0 270 > th dose independent rect. 11 1
384 74.86 atmosphere 1015.0 270 < th dose independent rect. 11 1
385 74.86 precipitation 0.1 270 < th dose independent rect. 11 1
387 74.86 temperature 10.0 270 > th dose independent rect. 12 23
388 74.86 precipitation 0.1 270 < th dose dependent rect. 11 1
389 74.87 radiation 1.0 270 > th dose independent rect. 11 1
395 74.90 temperature 10.0 1440 > th dose independent rect. 21 11
398 74.90 temperature 30.0 1440 < th dose independent rect. 21 11
402 74.90 humidity 50.0 1440 > th dose independent rect. 21 11
407 74.90 atmosphere 995.0 1440 > th dose independent rect. 21 11
408 74.90 temperature 10.0 1440 > th dose independent rect. 8 13
414 74.92 temperature 30.0 270 < th dose independent rect. 10 3
417 74.94 wind 9.0 270 < th dose independent rect. 10 3
425 74.96 wind 1.0 10 > th dose independent rect. 16 4
426 74.96 temperature 10.0 10 > th dose independent rect. 16 4
428 74.96 atmosphere 1010.0 10 < th dose independent rect. 16 4
430 74.96 radiation 40.0 10 < th dose independent rect. 16 4
437 74.97 wind 9.0 270 < th dose independent rect. 13 21
443 75.00 radiation 20.0 90 < th dose independent rect. 16 4
449 75.02 atmosphere 995.0 10 > th dose independent rect. 20 20
460 75.06 precipitation 0.1 270 < th dose independent rect. 9 13
462 75.06 precipitation 0.1 270 < th dose dependent rect. 9 13
468 75.07 precipitation 0.1 10 < th dose independent rect. 16 4
472 75.07 precipitation 0.1 10 < th dose dependent rect. 16 4
476 75.09 radiation 20.0 10 < th dose dependent rect. 20 16
483 75.13 wind 1.0 270 > th dose independent rect. 15 3
484 75.13 temperature 10.0 270 > th dose independent rect. 15 3
486 75.13 atmosphere 1010.0 270 < th dose independent rect. 15 3
489 75.13 wind 9.0 30 < th dose independent rect. 16 4
490 75.13 precipitation 0.1 270 < th dose independent rect. 22 11
492 75.13 temperature 10.0 270 > th dose independent rect. 18 21
493 75.13 precipitation 0.1 270 < th dose dependent rect. 22 11
495 75.14 wind 1.0 270 > th dose dependent rect. 16 1
496 75.15 wind 9.0 270 < th dose independent rect. 14 19
497 75.15 precipitation 0.1 270 < th dose independent rect. 13 21
498 75.15 precipitation 0.1 270 < th dose dependent rect. 13 21
499 75.16 temperature 10.0 270 > th dose independent rect. 16 1
501 75.16 atmosphere 1010.0 270 < th dose independent rect. 16 1
503 75.16 radiation 40.0 270 < th dose independent rect. 16 1
506 75.16 temperature 10.0 270 > th dose independent rect. 17 23
509 75.17 wind 1.0 270 > th dose independent rect. 16 1
510 75.17 humidity 60.0 270 > th dose independent rect. 11 1
521 75.21 atmosphere 995.0 270 > th dose independent rect. 16 1
533 75.27 wind 1.0 270 > th dose independent rect. 11 1
535 75.27 temperature 10.0 1440 > th dose independent rect. 17 4
538 75.27 radiation 30.0 1440 < th dose independent rect. 17 4
544 75.27 temperature 10.0 1440 > th dose independent rect. 21 20
554 75.32 radiation 1.0 270 > th dose independent sin 13 NA
555 75.32 wind 9.0 270 < th dose independent rect. 16 1
559 75.34 precipitation 0.1 270 < th dose independent rect. 15 2
562 75.34 precipitation 0.1 270 < th dose dependent rect. 15 2
563 75.35 wind 9.0 270 < th dose independent rect. 15 3
564 75.35 radiation 40.0 270 < th dose independent rect. 15 3
576 75.38 wind 9.0 270 < th dose independent rect. 9 13
577 75.38 precipitation 0.1 270 < th dose independent rect. 14 19
578 75.38 radiation 40.0 270 < th dose dependent rect. 16 1
579 75.38 precipitation 0.1 270 < th dose dependent rect. 14 19
581 75.39 atmosphere 995.0 270 > th dose independent rect. 15 3
585 75.40 atmosphere 995.0 270 > th dose independent rect. 14 19
586 75.41 temperature 30.0 270 < th dose independent rect. 22 11
587 75.42 radiation 40.0 270 < th dose independent rect. 10 3
589 75.43 radiation 1.0 270 < th dose independent sin 13 NA
592 75.43 humidity 50.0 270 > th dose independent rect. 18 21
595 75.45 wind 9.0 270 < th dose independent rect. 11 1
599 75.45 atmosphere 995.0 270 > th dose independent rect. 18 21
618 75.46 precipitation 0.1 270 < th dose independent rect. 17 22
620 75.46 precipitation 0.1 270 < th dose dependent rect. 17 22
645 75.53 radiation 40.0 270 < th dose independent rect. 9 5
646 75.53 atmosphere 1015.0 270 < th dose independent rect. 23 11
673 75.63 atmosphere 995.0 270 > th dose independent rect. 13 21
678 75.66 wind 9.0 270 < th dose independent rect. 18 21
693 75.68 wind 9.0 30 < th dose independent rect. 20 20
705 75.71 temperature 10.0 90 > th dose dependent rect. 24 11
730 75.78 atmosphere 995.0 270 > th dose dependent rect. 16 1
746 75.84 humidity 50.0 30 > th dose independent rect. 20 20
747 75.84 temperature 30.0 90 < th dose dependent rect. 11 4
785 75.95 temperature 10.0 30 > th dose dependent rect. 7 13
789 75.97 wind 1.0 270 > th dose dependent rect. 14 5
802 76.00 temperature 15.0 10 > th dose independent rect. 11 13
866 76.19 temperature 30.0 270 < th dose independent rect. 16 1
877 76.20 temperature 30.0 270 < th dose dependent rect. 11 1
882 76.21 wind 9.0 270 < th dose independent rect. 12 23
909 76.27 radiation 40.0 270 < th dose independent rect. 14 19
930 76.30 humidity 80.0 10 < th dose independent rect. 16 19
990 76.42 wind 9.0 720 < th dose independent rect. 17 14