BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0703000 Os11g0703000|AK108011
(212 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250 70 8e-13
AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317 69 2e-12
AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282 65 2e-11
AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254 64 7e-11
AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240 64 7e-11
AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666 63 1e-10
AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331 63 1e-10
AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346 62 3e-10
AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247 61 3e-10
AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421 60 1e-09
AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302 57 6e-09
AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248 54 4e-08
AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257 54 6e-08
AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247 53 1e-07
AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357 52 2e-07
AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261 52 2e-07
AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295 51 6e-07
AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265 49 2e-06
AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209 48 5e-06
AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245 47 6e-06
>AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250
Length = 249
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 67/181 (37%), Gaps = 48/181 (26%)
Query: 69 PPGAWSGRVVARTGC-RGNGSSRCDTGD------------APPVTVAQVSVHGAGG--LA 113
P WSGR+ ART C NG C TGD APP ++AQ +H G +
Sbjct: 70 PTTHWSGRIWARTWCAHYNGKFSCLTGDCGNRLECNGLGGAPPASLAQFDLHHGGHHDFS 129
Query: 114 EYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDLXXXXXXXXXXXXXX---------- 163
Y VSLVDG+NV + VTPH E +CP +GC DL
Sbjct: 130 SYGVSLVDGYNVPMTVTPH--EGHGVCPVVGCREDLIKTCPAHLQVRSHSGHVVACKSGC 187
Query: 164 ---------------------XXXXXEAFKARCPDTRTTPTDVEVTPQRCIQPAELKVVF 202
FK CP + T D C P ELKV+F
Sbjct: 188 EAFHTDELCCRGHYNSPNTCKASSHSLFFKHACPSSFTFAHDSPSLMHDCASPRELKVIF 247
Query: 203 C 203
C
Sbjct: 248 C 248
>AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317
Length = 316
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 70 PGAWSGRVVARTGCR--GNGSSRCDTGD-------------APPVTVAQVSVHGAGGLAE 114
P +W GR RT C +G C TGD APP T+A+ ++ G+GGL
Sbjct: 63 PSSWGGRFWGRTLCSTDSDGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLDGSGGLDF 122
Query: 115 YSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
Y VSLVDG+NV ++V P G G+ C S GC VDL
Sbjct: 123 YDVSLVDGYNVQMLVVPQG-GSGQNCSSTGCVVDL 156
>AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282
Length = 281
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 75/188 (39%), Gaps = 49/188 (26%)
Query: 70 PGAWSGRVVARTGC---RGNGSSRCDTGD-------------APPVTVAQVSVHGAGGLA 113
P +WSGR+ ART C R +GS C TGD PP T+A+ +++G GGL
Sbjct: 66 PESWSGRLWARTLCSQDRSSGSFVCLTGDCGSGKVECSGSGAKPPATLAEFTLNGTGGLD 125
Query: 114 EYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDLX------XXXXXXXXXXXXXXXXX 167
Y VSLVDG+N+ +++ P G C + GC VDL
Sbjct: 126 FYDVSLVDGYNLPMLILPKKIVIGG-CGATGCLVDLNGACPRDLKLVTRGNGNGVACRSA 184
Query: 168 XEA--------------------------FKARCPDTRTTPTDVEVTPQRCIQPAELKVV 201
EA FK CP + D + + C A+ ++
Sbjct: 185 CEAFGDPRYCCSDAYATPDTCQPSVYSLFFKHACPRAYSYAYDDKTSTYTCATGADYFII 244
Query: 202 FCPPDNTS 209
FCPP TS
Sbjct: 245 FCPPPYTS 252
>AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254
Length = 253
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 70 PGAWSGRVVARTGCRGN---GSSRCDTGDA-------------PPVTVAQVSVHGAGGLA 113
P AWSGR+ RT C N G C TGD PP T+A+ +++GA L
Sbjct: 66 PAAWSGRIWGRTLCNQNEITGIFTCVTGDCGSSQIECSGAGAIPPATLAEFTLNGAENLD 125
Query: 114 EYSVSLVDGFNVAVVVTPHGFEQG-RLCPSLGCAVDLXXXXXXXXXXXXXXXXXXXEAFK 172
Y VSLVDG+N+ + + P+G G C + GCA DL A K
Sbjct: 126 FYDVSLVDGYNIPMTIVPYGGAIGVGKCNATGCAADLNGLCPEQLKVTVEAAGTGAVACK 185
Query: 173 ARCPDTRTTP----TDVEVTPQRCIQPAELKVVF 202
+ C + TP TP C QP+E V F
Sbjct: 186 SAC-EAFGTPEFCCNGAFGTPDTC-QPSEYSVFF 217
>AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240
Length = 239
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 70 PGAWSGRVVARTGCR----GNGSS--------RCDTGDAPPVTVAQVSVHGAGGLAEYSV 117
P WSGR ARTGC GNG RC+ G PPVT+A+ ++ G GG Y V
Sbjct: 66 PAGWSGRFWARTGCNFDASGNGRCVTGDCGGLRCNGGGVPPVTLAEFTLVGDGGKDFYDV 125
Query: 118 SLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
SLVDG+NV + + P G C GC DL
Sbjct: 126 SLVDGYNVKLGIRPSGGSGD--CKYAGCVSDL 155
>AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666
Length = 665
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 70 PGAWSGRVVARTGCR--------------GNGSSRC-DTGDAPPVTVAQVSVHGAGGLAE 114
P +WSGR+ R+ C G+G C D+G PP T+ ++ G
Sbjct: 68 PPSWSGRLWGRSFCSTSSTGNFSCATGDCGSGKIECSDSGARPPTTLIDFTLDATDGQDF 127
Query: 115 YSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
Y VS+VDG+N+ +VV P GR C ++GC V+L
Sbjct: 128 YDVSVVDGYNLPLVVVPQRLGSGRTCSNVGCVVNL 162
>AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331
Length = 330
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 16/95 (16%)
Query: 70 PGAWSGRVVARTGCR--------------GNGSSRCD-TGDAPPVTVAQVSVHGAGGLAE 114
P +W GR RT C G+G+ C +G PP T+A+ ++ G+ GL
Sbjct: 66 PTSWGGRFWGRTQCSTDTDGKFTCLTGDCGSGTLECSGSGATPPATLAEFTLDGSNGLDF 125
Query: 115 YSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
Y VSLVDG+NV ++V P G G C S GC VDL
Sbjct: 126 YDVSLVDGYNVPMLVAPQG-GSGLNCSSTGCVVDL 159
>AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346
Length = 345
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 18/95 (18%)
Query: 70 PGAWSGRVVARTGCR--GNGSSRCDTGD-------------APPVTVAQVSVHGAGGLAE 114
P WSGR ARTGC+ +GS C TGD APPVT+A+ ++ G GG
Sbjct: 73 PTGWSGRFWARTGCKFDSSGSGTCKTGDCGSNAVECAGLGAAPPVTLAEFTL-GTGGDDF 131
Query: 115 YSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
Y VSLVDG+N+ ++V G G+ C S GC DL
Sbjct: 132 YDVSLVDGYNIPMIVEVAG-GSGQ-CASTGCTTDL 164
>AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247
Length = 246
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 56 LDGNGDGLATLAFP-----------PGAWSGRVVARTGC------RGN-------GSSRC 91
L GN + L FP P WSGR ARTGC GN G +C
Sbjct: 42 LSGNDNTLGDGGFPLTPGASVQLTAPAGWSGRFWARTGCNFDASGHGNCGTGDCGGVLKC 101
Query: 92 DTGDAPPVTVAQVSVHGAGGLAEYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
+ G PPVT+A+ ++ G GG Y VSLVDG+NV + + P G C GC D+
Sbjct: 102 NGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVEMGIKPQGGSGD--CHYAGCVADV 157
>AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421
Length = 420
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 15/92 (16%)
Query: 73 WSGRVVARTGCR--GNGSSRCDTGD------------APPVTVAQVSV-HGAGGLAEYSV 117
WSGR+ ARTGC NG+ +C TGD APP ++ ++++ HG+ Y V
Sbjct: 71 WSGRIWARTGCNFDANGAGKCMTGDCGGKLECAGNGAAPPTSLFEITLGHGSDDKDFYDV 130
Query: 118 SLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
SLVDG+N+ +V P G C + GC D+
Sbjct: 131 SLVDGYNLPIVALPTGGGLVGACNATGCVADI 162
>AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302
Length = 301
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Query: 70 PGAWSGRVVARTGCRGN---GSSRCDTGD-------------APPVTVAQVSVHGAGGLA 113
P AWSGR+ RT C + G C TGD APP T+A+ +++GA GL
Sbjct: 66 PAAWSGRIWGRTLCTQDATTGRFTCITGDCGSSTVECSGSGAAPPATLAEFTLNGANGLD 125
Query: 114 EYSVSLVDGFNVAVVVTPHGFEQGRL----CPSLGCAVDL 149
Y VSLVDG+N+ + + P G C + GC +L
Sbjct: 126 FYDVSLVDGYNIPMTIVPQGGGDAGGVAGNCTTTGCVAEL 165
>AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248
Length = 247
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 65 TLAFPPGAWSGRVVARTGCR--GNGSSRCDTGD------------APPVTVAQVSVHGAG 110
T PG WSGR ART C +GS +C TGD APP T+A+ ++ +G
Sbjct: 64 TFTVSPG-WSGRFWARTYCNFDASGSGKCGTGDCGSKLKCAGAGGAPPATLAEFTIGSSG 122
Query: 111 GLAE----YSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
Y VSLVDG+NV + +TP G C + GC D+
Sbjct: 123 KKNAVQDFYDVSLVDGYNVQMKITPQGGSGD--CKTAGCVSDV 163
>AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257
Length = 256
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 17/95 (17%)
Query: 70 PGAWSGRVVARTGC--RGNGSSRCDTGD------------APPVTVAQVSVHGAGGLAE- 114
P WSGR+ ARTGC N C+TGD PP T+ Q++V
Sbjct: 71 PLGWSGRIWARTGCDFTSNSKQACETGDCDGHLECNGLIGKPPATLIQIAVQADKSKPNF 130
Query: 115 YSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
Y VSLVDG+N+ VVV C LGC DL
Sbjct: 131 YDVSLVDGYNLPVVVNSKPVSSK--CTILGCHKDL 163
>AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247
Length = 246
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 56 LDGNGDGLATLAFP--PGA---------WSGRVVARTGCRGNGSS-------------RC 91
L GN L FP PGA WSGR ARTGC + S +C
Sbjct: 41 LSGNSITLGDGGFPLTPGASVQLTAPTGWSGRFWARTGCNFDASGHGTCVTGDCGGVLKC 100
Query: 92 DTGDAPPVTVAQVSVHGA-GGLAEYSVSLVDGFNVAVVVTPH-GFEQGRLCPSLGCAVDL 149
G PP T+A+ +V + G+ Y VSLVDG+NV + + P GF C GC D+
Sbjct: 101 TGGGVPPATLAEFTVGSSNAGMDFYDVSLVDGYNVKMGIKPQGGFGN---CKYAGCVSDI 157
>AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357
Length = 356
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 62 GLATLAFPPGAWSGRVVARTGCR--GNGSSRCDTGD-----------APPVTVAQVSVHG 108
G + + P WSGR+ RTGC+ G+ C+TG PP ++A+ ++
Sbjct: 121 GQSIVFHAPVGWSGRIWGRTGCKFDSTGTGTCETGSCGSTLKCSASGKPPASLAEFTL-- 178
Query: 109 AGGLAEYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
L Y VSLVDGFN+ + VTP + C GC DL
Sbjct: 179 -AALDFYDVSLVDGFNLPMSVTPMNGKGN--CSVAGCVADL 216
>AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261
Length = 260
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 50/103 (48%), Gaps = 26/103 (25%)
Query: 70 PGAWSGRVVARTGCRGN---GSSRCDTGD-------------APPVTVAQVSVHGAGGLA 113
P +WSGR ARTGC N G C TGD PP T+A+ ++ G A
Sbjct: 76 PASWSGRFWARTGCNFNSDTGQGTCLTGDCGSNQVECNGAGAKPPATLAEFTI--GSGPA 133
Query: 114 E-------YSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
+ Y VSLVDG+NV ++V G +G C + GC DL
Sbjct: 134 DPARKQDFYDVSLVDGYNVPMLVEASGGSEGT-CLTTGCVTDL 175
>AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295
Length = 294
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 60 GDGLATLAFPPGAWSGRVVARTGC--RGNGSSRCDTGD-------------APPVTVAQV 104
G G T+ P WSGR+ R GC NG C TGD PP TV ++
Sbjct: 54 GSGEETIIDVPDKWSGRIWGRQGCTFNQNGKGSCQTGDCNDGSINCQGTGGVPPATVVEM 113
Query: 105 SVHGAGG-LAEYSVSLVDGFNVAVVVTP 131
++ + L Y VSLVDGFN+ V + P
Sbjct: 114 TLGSSSSPLHFYDVSLVDGFNLPVSMKP 141
>AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265
Length = 264
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 65 TLAFPPGAWSGRVVARTGCRGN--GSSRCDTGD------------APPVTVAQVSVHGAG 110
TL PP WSGR R GC + G RC TGD PP T+A++++
Sbjct: 81 TLQLPP-LWSGRFWGRHGCSFDRSGRGRCATGDCGGSFLCNGAGGVPPATLAEITL--GH 137
Query: 111 GLAEYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
+ Y VSLVDG+N+A+ + P + C GC DL
Sbjct: 138 DMDFYDVSLVDGYNLAMSIMP--VKGTGKCTYAGCVSDL 174
>AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209
Length = 208
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 93 TGDAPPVTVAQVSVHGAGGLAEYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
+G PP T+A+ ++ +G L Y VSLVDG+N+ ++V G LCP+ GC DL
Sbjct: 6 SGAEPPATLAEFTLGISGSLDFYDVSLVDGYNLPMIVEGSG-----LCPTTGCVTDL 57
>AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245
Length = 244
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 19/99 (19%)
Query: 65 TLAFPPGAWSGRVVARTGCRGNGSSR--CDTGDA------------PPVTVAQVSVHGAG 110
+L PP WSGR R GC + S R C TGD PP T+A++++
Sbjct: 61 SLQLPP-LWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITL--GP 117
Query: 111 GLAEYSVSLVDGFNVAVVVTPHGFEQGRLCPSLGCAVDL 149
L Y VSLVDG+N+A+ + P + C GC DL
Sbjct: 118 ELDFYDVSLVDGYNLAMSIMP--VKGSGQCSYAGCVSDL 154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,633,321
Number of extensions: 129877
Number of successful extensions: 242
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 20
Length of query: 212
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 118
Effective length of database: 8,529,465
Effective search space: 1006476870
Effective search space used: 1006476870
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)