BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0284000 Os12g0284000|AK065041
(534 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0284000 Regulator of chromosome condensation/beta-lact... 969 0.0
Os02g0597000 Regulator of chromosome condensation/beta-lact... 538 e-153
Os07g0459400 Regulator of chromosome condensation/beta-lact... 155 6e-38
Os08g0430700 Similar to UVB-resistance protein-like 97 4e-20
Os02g0554100 Similar to UVB-resistance protein UVR8 91 2e-18
Os04g0435700 Similar to UVB-resistance protein UVR8 82 9e-16
Os01g0964800 Similar to Chromosome condensation regulator p... 79 1e-14
Os04g0686200 Similar to Chromosome condensation regulator p... 78 2e-14
Os01g0952300 Pleckstrin homology-type domain containing pro... 70 5e-12
Os05g0384800 Similar to Chromosome condensation regulator p... 69 9e-12
>Os12g0284000 Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II domain containing protein
Length = 534
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/534 (90%), Positives = 484/534 (90%)
Query: 1 MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGGSAPGEFPLAANPSIVLH 60
MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGGSAPGEFPLAANPSIVLH
Sbjct: 1 MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGGSAPGEFPLAANPSIVLH 60
Query: 61 VLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQERE 120
VLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQERE
Sbjct: 61 VLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQERE 120
Query: 121 MFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNSSGQLGH 180
MFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNSSGQLGH
Sbjct: 121 MFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNSSGQLGH 180
Query: 181 GSLEEEWRPRIIRSLXXXXXXXXXXXXXXTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVV 240
GSLEEEWRPRIIRSL TMLVSDAGRVYAFGKDSFGEVEYAAQGSRVV
Sbjct: 181 GSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVV 240
Query: 241 TTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAG 300
TTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAG
Sbjct: 241 TTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAG 300
Query: 301 PLENIPVVQIXXXXXXXXXXXXQPSGMSVYSVXXXXXXXXXXXSRTDEKYPRLIEQFQAL 360
PLENIPVVQI QPSGMSVYSV SRTDEKYPRLIEQFQAL
Sbjct: 301 PLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQAL 360
Query: 361 NIQPXXXXXXXXXXXXXGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVA 420
NIQP GKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVA
Sbjct: 361 NIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVA 420
Query: 421 TGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQI 480
TGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQI
Sbjct: 421 TGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQI 480
Query: 481 SLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTPERVEIDLS 534
SLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTPERVEIDLS
Sbjct: 481 SLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTPERVEIDLS 534
>Os02g0597000 Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II domain containing protein
Length = 537
Score = 538 bits (1386), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/539 (51%), Positives = 345/539 (64%), Gaps = 13/539 (2%)
Query: 1 MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGGSAPGEFPLAANPSIVLH 60
MDA +SG S + H I+D+ + SPL + +RSQRHC+G PGEFPLA +PSIVLH
Sbjct: 5 MDAA-ASGTSPVMQFHGIVDEPPSHSSPLHTALERSQRHCYGHETPGEFPLAVSPSIVLH 63
Query: 61 VLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQERE 120
VL++C L+P DLA LEATC+FF KPANF P+F LS+ E+AA DMC KR + K M QQERE
Sbjct: 64 VLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHKRPMVKLMAQQERE 123
Query: 121 MFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNSSGQLGH 180
KQRCGGSWKLV ++I+A E R S+ +AGPGHSI VTT G Y+FG+N GQLG
Sbjct: 124 QLKQRCGGSWKLVFKYIVARE----RNYSRIVAGPGHSIVVTTKGDAYSFGANCWGQLGL 179
Query: 181 GSLEEEWRPRIIRSLXXXXXXXXXXXXXXTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVV 240
G E+ ++P +IRSL TMLVSD G VYAFGK SF E + + +
Sbjct: 180 GDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFGKGSF-VWEELSDAADHI 238
Query: 241 TTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAG 300
TTP++VESLK +++VQAAIG +F+A LSREG VYT SWG +LGH ++P+DV+P LL+G
Sbjct: 239 TTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLGHSSDPSDVEPRLLSG 298
Query: 301 PLENIPVVQIXXXXXXXXXXXXQPSGMSVYSVXXXXXXXXXXXSRTDEKYPRLIEQFQAL 360
PLE + V QI QP+GMSVYSV + ++ P+LIE F L
Sbjct: 299 PLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHGCKNNKGTPKLIEHFLTL 358
Query: 361 NIQPXXXXXXXXXXXXXGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVA 420
+ P G DGRVCTWGWG GCLGHG+EE +P VV+ L NV+AVHV+
Sbjct: 359 SFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNVKAVHVS 418
Query: 421 TGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQI 480
TG+YTTFVVSD GD YSFG ES ++G E + +P LV SLK N++ QI
Sbjct: 419 TGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEE-AADDADFSTPSLVESLKVLNDKAVQI 477
Query: 481 SLTNSIYW------NAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTPERVEIDL 533
S TNS YW HTFAL +SGKLYAFG G KGQLG +L + PERV IDL
Sbjct: 478 STTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKLSEGQERAQNPERVPIDL 536
>Os07g0459400 Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II domain containing protein
Length = 484
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 215/508 (42%), Gaps = 61/508 (12%)
Query: 42 GGSAPGEFPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELA 100
G AP F + P ++ VLTS L DLA LEATC R ++E A
Sbjct: 4 GEKAPRAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRALRP-----------LAEHA 52
Query: 101 ALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMA-----GEACCRREKSQAIAGP 155
A +C RA F M R +RCGGSWK VLRF+ + G Q G
Sbjct: 53 ASRLCAARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGR 112
Query: 156 GHSIAVTTSGAVYTFGSNSSGQLGHG-------SLEEEWRPRIIRSLXXXXXXXXXXXXX 208
H++ V S +VY+ GS+ G LGHG + P + R +
Sbjct: 113 YHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAA--- 168
Query: 209 XTMLVSDAGRVYAFGKDS-----FGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFF 263
V++ G V+ G +S GEV R + P +++LK I Q A G F
Sbjct: 169 ---FVTELGEVFTCGDNSSLCCGHGEV------GRTIFRPTEIKALKGISCKQVATGLSF 219
Query: 264 TAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIXXXXXXXXXXXXQ 323
T +L+ +G VYT +LGH + P ++ PVVQ+
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDD 279
Query: 324 PSGMSVYSVXXXXXXXXXXXSRTDEKYPRLIEQFQALNIQPXXXXXXXXXXXXXGKDGRV 383
+ VYS + DE PR I+ F+ NI G V
Sbjct: 280 GT---VYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 336
Query: 384 CTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGES 443
TWG G G LGHG+E ++ P+++ SL + AV V TFV++D+G V++FG
Sbjct: 337 YTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGF 396
Query: 444 SSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYA 503
SLG V+ P ++ SL+ + V+QIS +Y HT A+T+ G ++
Sbjct: 397 GSLGFPD----RGSSDKVMRPRVLDSLR--DHYVSQIS--TGLY---HTVAVTNRGIVFG 445
Query: 504 FGAGDKGQLGTELVAQESERGTPERVEI 531
FG ++ QLG E + RG + EI
Sbjct: 446 FGDNERAQLGQEYI-----RGCLKPTEI 468
>Os08g0430700 Similar to UVB-resistance protein-like
Length = 395
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 25/370 (6%)
Query: 166 AVYTFGSNSSGQLGHGSLEEEWRPRIIRSLXXXXXXXXXXXXXXTMLVSDAGRVYAFGKD 225
AV +GS GQLG G EEE R + +L ++ + GR++ +G +
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWN 71
Query: 226 SFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDM-KL 284
G + + + ++ ++P V++L + IVQAAIG + + +G Y + GN+ +
Sbjct: 72 QRGTLGHPPE-TKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG-GNEYGQC 129
Query: 285 GHQTEPNDVQPHLLAGPLENIPVVQIXXXXXXXXXXXXQPSGMSVYSVXXXXXXXXXXXS 344
G + E + L +IP+ Q + V +
Sbjct: 130 GEEAERKEDGTRAL---RRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP 186
Query: 345 RTDEKYPRLIEQFQAL-NIQPXXXXXXXXXXXXXGKDGRVCTWGWGRYGCLGHGNEECES 403
D K + Q L N++ +DG + WG YG LG G+ + S
Sbjct: 187 PGDIKQISTPVRVQGLENVKVIAVGAFHNLALT--EDGILWAWGNNEYGQLGTGDTQPRS 244
Query: 404 VPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLS 463
P VE L ++ V +A G + + ++ +G+VY++G GE LG G+++ ++++
Sbjct: 245 QPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF-----GDDKSSHMV- 298
Query: 464 PELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESER 523
P+ V L E + Q+S + H+ ALT G+++++G GD G+LG ++
Sbjct: 299 PQKVELL--AGEDIIQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLG---YGRKVTT 348
Query: 524 GTPERVEIDL 533
G P V IDL
Sbjct: 349 GHPMEVPIDL 358
>Os02g0554100 Similar to UVB-resistance protein UVR8
Length = 453
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 139/362 (38%), Gaps = 69/362 (19%)
Query: 153 AGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLXXXXXXXXXXXXXXTML 212
AG HS+A+ + G V ++G GQLGHG E+ P ++ T
Sbjct: 32 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL-----------------TAA 74
Query: 213 VSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGH 272
DA P V S + I A + TA E
Sbjct: 75 FDDA--------------------------PGGVAS---VVICGA---DHTTAYSDEELQ 102
Query: 273 VYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIXXXXXXXXXXXXQPSGMSVYSV 332
+Y++ WG+ +LGH + P P++ + V+I V+S
Sbjct: 103 LYSWGWGDFGRLGHGNSSDVFNPQ----PIQALQGVRITQIACGDSHCLAVTVAGHVHSW 158
Query: 333 XXXXXXXXXXXSRTDEKYPRLIEQFQALNIQPXXXXXXXXXXXXXGKDGRVCTWGWGRYG 392
+ D P+ I+ F+ + ++ +DG + WGWGRYG
Sbjct: 159 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVT--EDGDLYGWGWGRYG 216
Query: 393 CLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTIT 452
LG G+ + +P+ V S+ + V VA G T VS G +Y++G + LGH
Sbjct: 217 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276
Query: 453 EGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQL 512
+ L P + +LK T ++QIS W HT AL GKLY +G GQ+
Sbjct: 277 D-------HLVPHKLEALKDTT--ISQISGG----WR-HTMALAADGKLYGWGWNKFGQV 322
Query: 513 GT 514
G
Sbjct: 323 GV 324
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 8/263 (3%)
Query: 149 SQAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLXXXXXXXXXXXXX 208
+Q G H +AVT +G V+++G N +GQLG G+ E+ P+ I++
Sbjct: 137 TQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 196
Query: 209 XTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLS 268
T V++ G +Y +G +G + + R++ P+ V S+ +V A G T +S
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLI--PEKVSSVNGQKMVLVACGWRHTITVS 254
Query: 269 REGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIXXXXXXXXXXXXQPSGMS 328
G +YT+ W +LGH D + HL+ LE + I +
Sbjct: 255 SSGSIYTYGWSKYGQLGH----GDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGK 310
Query: 329 VYSVXXXXXXXXXXXSRTDEKYPRLIEQFQALNIQPXXXXXXXXXXXXXGKDGRVCTWGW 388
+Y D P + + K+ V +WG
Sbjct: 311 LYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKN--VFSWGR 368
Query: 389 GRYGCLGHGNEECESVPKVVESL 411
G G LGHG ++PK++++L
Sbjct: 369 GTSGQLGHGEIVDRNIPKMIDAL 391
>Os04g0435700 Similar to UVB-resistance protein UVR8
Length = 453
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 20/251 (7%)
Query: 264 TAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIXXXXXXXXXXXXQ 323
TA E VY++ WG+ +LGH + P P++ + ++I
Sbjct: 89 TAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQ----PVKALQGIKIKQIACGDSHCLAV 144
Query: 324 PSGMSVYSVXXXXXXXXXXXSRTDEKYPRLIEQFQALNIQPXXXXXXXXXXXXXGKDGRV 383
V S + D P+ I+ F+ + ++ +DG +
Sbjct: 145 TMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVT--EDGDL 202
Query: 384 CTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGES 443
WGWGRYG LG G+ VP+ V S+ + V +A G T VS G +Y++G +
Sbjct: 203 YGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKY 262
Query: 444 SSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYA 503
LGH + L P + +LK ++ ++QIS W HT ALT GKLY
Sbjct: 263 GQLGHGDFED-------HLVPHKLEALKDSS--ISQISGG----WR-HTMALTSDGKLYG 308
Query: 504 FGAGDKGQLGT 514
+G GQ+G
Sbjct: 309 WGWNKFGQVGV 319
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 8/262 (3%)
Query: 150 QAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLXXXXXXXXXXXXXX 209
Q G H +AVT +G V ++G N +GQLG G+ E+ P+ I+S
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEH 192
Query: 210 TMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSR 269
T V++ G +Y +G +G + + R+V P+ V S++ +V A G T +S
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PEKVSSVEGEKMVLIACGWRHTITVSS 250
Query: 270 EGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIXXXXXXXXXXXXQPSGMSV 329
G +YT+ W +LGH D + HL+ LE + I S +
Sbjct: 251 SGSLYTYGWSKYGQLGH----GDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKL 306
Query: 330 YSVXXXXXXXXXXXSRTDEKYPRLIEQFQALNIQPXXXXXXXXXXXXXGKDGRVCTWGWG 389
Y D +P ++ + + K+ V +WG G
Sbjct: 307 YGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKN--VFSWGRG 364
Query: 390 RYGCLGHGNEECESVPKVVESL 411
G LGHG + P ++++L
Sbjct: 365 TSGQLGHGEIVDRNKPVMIDAL 386
>Os01g0964800 Similar to Chromosome condensation regulator protein (Fragment)
Length = 496
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 127/311 (40%), Gaps = 15/311 (4%)
Query: 153 AGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLXXXXXXXXXXXXXXTML 212
G HS VT +G V+T+G S G+LGHGS E+ PR+I SL T
Sbjct: 84 CGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCA 143
Query: 213 VSDAGRVYAFGKDSFGEVEYAAQGSRVV--TTPQLVESLKDIYIVQAAIGNFFTAVLSRE 270
V+ AG +Y +G D V G V ++ +L+ + + + G + TA+++
Sbjct: 144 VTTAGELYTWG-DGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTM 202
Query: 271 GHVYTFSWGNDMKLGHQTE-----PNDVQPHLLAGPLENIPV-VQIXXXXXXXXXXXXQP 324
G ++TF G LGH P +V+ L+G L+ I V + Q
Sbjct: 203 GQLFTFGDGTFGVLGHGNRESISCPKEVES--LSG-LKTISVACGVWHTAAIVEVIVTQS 259
Query: 325 SGMSVYSVXXXXXXXXXXXSRTDEKYPRLIEQFQALNIQPXXXXXXXXXXXXXG--KDGR 382
S +K PRL A I G G+
Sbjct: 260 SSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGK 319
Query: 383 VCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGE 442
V + G YG LG+ + +P +VE +V V VA G Y V++ K +V+++G G
Sbjct: 320 VLSMGNTVYGQLGNPRSD-GKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGA 378
Query: 443 SSSLGHNTITE 453
+ LGH I +
Sbjct: 379 NGRLGHGDIED 389
>Os04g0686200 Similar to Chromosome condensation regulator protein (Fragment)
Length = 1057
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 28/285 (9%)
Query: 154 GPGHSIAVTTSGAVYTFG--SNSSGQLGHGSLEEEWRP-RIIRSLXXXXXXXXXXXXXXT 210
G H+ A+T +G +YT+G ++++G LGHGS W P R+ L T
Sbjct: 321 GEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHT 380
Query: 211 MLVSDAGRVYAFGKDSFGEVEYAAQGSR-VVTTPQLVESLKDIYIVQAAIGNFFTAVL-- 267
L++ +G++Y FG +FG + G+R ++ P+ VESLK + + + G + TA +
Sbjct: 381 ALITSSGKLYTFGDGTFGVL---GHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVE 437
Query: 268 -------SREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLE---NIPVVQIXXXXXXX 317
+ G ++T+ G+ +LGH + ++P + ++ + V
Sbjct: 438 VIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 497
Query: 318 XXXXXQPSGMSVYSVXXXXXXXXXXXSRTDEKYPRLIEQFQALNIQPXXXXXXXXXXXXX 377
+G SVY D +YPRL+E+ +
Sbjct: 498 TSGHIFTAGSSVYG--------QLGNPNNDGRYPRLVEE-KLGGGGVVEVACGAYHVAVL 548
Query: 378 GKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATG 422
+ G V TWG G G LGHG+ P VE+L + +A G
Sbjct: 549 TQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACG 593
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 128/328 (39%), Gaps = 31/328 (9%)
Query: 212 LVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREG 271
LV+ V+ +G++ G + + A S + P+LVESL + A G F T ++ G
Sbjct: 275 LVTRQAEVFTWGEECSGRLGHGAGTS--IFQPRLVESLSICNVETIACGEFHTCAITATG 332
Query: 272 HVYTFSWG--NDMKLGHQTEPNDVQPHLLAGPLENIPVVQIXXXXXXXXXXXXQPSGMSV 329
+YT+ G N LGH + + P ++GPLE + Q+ S +
Sbjct: 333 DLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL---QVSAVSCGTWHTALITSSGKL 389
Query: 330 YSVXXXXXXXXXXXSRTDEKYPRLIEQFQALN-------IQPXXXXXXXXXXXXXGKDGR 382
Y+ +R YP+ +E + L + G+
Sbjct: 390 YTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGK 449
Query: 383 VCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGE 442
+ TWG G LGHG+ + P V SL++ G T ++ G +++ G
Sbjct: 450 LFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSV 509
Query: 443 SSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLY 502
LG N + + P LV E++ + H LT SG++Y
Sbjct: 510 YGQLG--------NPNNDGRYPRLV------EEKLGGGGVVEVACGAYHVAVLTQSGEVY 555
Query: 503 AFGAGDKGQLGTELVAQESERGTPERVE 530
+G G G+LG +A +R TP VE
Sbjct: 556 TWGKGANGRLGHGDIA---DRKTPTFVE 580
>Os01g0952300 Pleckstrin homology-type domain containing protein
Length = 1133
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 116/288 (40%), Gaps = 31/288 (10%)
Query: 154 GPGHSIAVTTSGAVYTFGSNSS--GQLGHGSLEEEWRP-RIIRSLXXXXXXXXXXXXXXT 210
G H+ AVT SG +YT+G + G LGHG+ W P R+ L T
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430
Query: 211 MLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVL--- 267
LV+ AG+++ FG SFG + + + S ++ P+ VESLK + V+AA G + TA +
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 488
Query: 268 ---------SREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLE-NIPVVQIXXXXXXX 317
G ++T+ G+ +LGH + + P +A +E N V
Sbjct: 489 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVA 548
Query: 318 XXXXXQ--PSGMSVYSVXXXXXXXXXXXSRTDEK-YPRLIEQFQALNIQPXXXXXXXXXX 374
G +VY R + K + +E+
Sbjct: 549 LTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRT--- 605
Query: 375 XXXGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATG 422
V TWG G G LGHG + ++ P +VE+L + + V G
Sbjct: 606 -------EVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
>Os05g0384800 Similar to Chromosome condensation regulator protein (Fragment)
Length = 1086
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 154 GPGHSIAVTTSGAVYTF--GSNSSGQLGHGSLEEEWRP-RIIRSLXXXXXXXXXXXXXXT 210
G H+ AVT SG +YT+ G+++SG LGHG+ W P R+ L T
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 429
Query: 211 MLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVL--- 267
+V+ AG+++ FG SFG + + + S ++ P+ VESLK + V+AA G + TA +
Sbjct: 430 AIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 487
Query: 268 ---------SREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLE 303
G ++T+ G+ +LGH + + P +A +E
Sbjct: 488 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 532
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,998,791
Number of extensions: 671658
Number of successful extensions: 2206
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2088
Number of HSP's successfully gapped: 22
Length of query: 534
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 428
Effective length of database: 11,501,117
Effective search space: 4922478076
Effective search space used: 4922478076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)