Os02g0597000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os02g0597000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.96 | 0.257 | 9.86 | -0.491 | 0.85 | -0.36 | 0.0269 | 0.812 | -0.064 | 5.51 | 23.7 | 1318 | -- | -- |
| 30.26 | 0.256 | 9.82 | -0.184 | 0.856 | -0.361 | -0.0374 | -- | 0.034 | 5.44 | 23 | 1489 | -- | -- |
| 29.37 | 0.252 | 9.85 | -0.419 | 0.853 | -0.365 | -- | 0.647 | -0.0311 | 5.57 | 23.1 | 1231 | -- | -- |
| 30.26 | 0.256 | 9.83 | -0.19 | 0.85 | -0.351 | -- | -- | 0.0324 | 5.47 | 22.9 | 1401 | -- | -- |
| 67.09 | 0.381 | 9.86 | -0.361 | -- | -0.414 | -- | 0.496 | -0.0131 | -- | 23 | 1304 | -- | -- |
| 35.76 | 0.28 | 9.79 | -0.0528 | 0.869 | -- | -0.00656 | -- | 0.175 | 5.4 | -- | -- | -- | -- |
| 35.76 | 0.28 | 9.79 | -0.0528 | 0.868 | -- | -- | -- | 0.175 | 5.4 | -- | -- | -- | -- |
| 67.7 | 0.383 | 9.84 | -0.188 | -- | -0.408 | -- | -- | 0.0323 | -- | 23.1 | 1285 | -- | -- |
| 31.04 | 0.259 | 9.82 | -- | 0.849 | -0.32 | -- | -- | 0.0715 | 5.51 | 22.86 | 1319 | -- | -- |
| 75.05 | 0.405 | 9.8 | -0.0235 | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
| 35.84 | 0.28 | 9.79 | -- | 0.868 | -- | -- | -- | 0.181 | 5.4 | -- | -- | -- | -- |
| 68.43 | 0.385 | 9.83 | -- | -- | -0.371 | -- | -- | 0.0682 | -- | 22.94 | 1302 | -- | -- |
| 75.07 | 0.404 | 9.8 | -- | -- | -- | -- | -- | 0.199 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 2 | 27.53 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 4 | 27.78 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 10 | 28.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 15 | 29.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 18 | 29.12 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 20 | 29.14 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 31 | 29.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 39 | 29.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 69 | 29.35 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 75 | 29.36 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 88 | 29.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 93 | 29.47 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 103 | 29.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 119 | 29.57 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 121 | 29.57 | radiation | 10 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 149 | 29.59 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 166 | 29.59 | radiation | 20 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 168 | 29.60 | radiation | 40 | 43200 | > th | dose independent | sin | 3 | NA |
| 189 | 29.60 | wind | 1 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 196 | 29.60 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 199 | 29.61 | radiation | 40 | 43200 | > th | dose independent | sin | 1 | NA |
| 247 | 29.63 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 389 | 29.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 410 | 29.65 | radiation | 20 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 411 | 29.65 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 10 |
| 415 | 29.66 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 427 | 29.68 | temperature | 25 | 1440 | < th | dose independent | sin | 20 | NA |
| 438 | 29.70 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 446 | 29.71 | temperature | 25 | 1440 | > th | dose independent | sin | 21 | NA |
| 450 | 29.71 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 498 | 29.74 | wind | 1 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 525 | 29.75 | radiation | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 541 | 29.77 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 698 | 29.80 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 709 | 29.80 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 729 | 29.81 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 804 | 29.82 | radiation | 40 | 43200 | > th | dose dependent | sin | 7 | NA |
| 806 | 29.82 | radiation | 40 | 43200 | > th | dose dependent | sin | 5 | NA |
| 808 | 29.82 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 864 | 29.83 | radiation | 40 | 43200 | > th | dose dependent | sin | 3 | NA |
| 878 | 29.84 | radiation | 10 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 882 | 29.84 | radiation | 10 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 903 | 29.84 | radiation | 30 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 937 | 29.85 | radiation | 40 | 43200 | > th | dose dependent | sin | 0 | NA |