Os12g0284000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os12g0284000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.69 | 0.229 | 10.7 | -0.267 | 0.632 | -0.695 | -0.073 | 0.257 | 0.0966 | 1.57 | 24.8 | 740 | -- | -- |
| 23.77 | 0.227 | 10.7 | -0.23 | 0.632 | -0.724 | -0.132 | -- | 0.1 | 1.56 | 24.56 | 732 | -- | -- |
| 23.71 | 0.227 | 10.7 | -0.269 | 0.632 | -0.695 | -- | 0.275 | 0.0951 | 1.57 | 24.77 | 743 | -- | -- |
| 23.81 | 0.227 | 10.7 | -0.221 | 0.633 | -0.726 | -- | -- | 0.108 | 1.57 | 24.51 | 736 | -- | -- |
| 44.38 | 0.31 | 10.7 | -0.467 | -- | -1 | -- | 0.884 | 0.0354 | -- | 36.19 | 1023 | -- | -- |
| 31.39 | 0.263 | 10.7 | -0.0237 | 0.698 | -- | -0.168 | -- | 0.253 | 1.15 | -- | -- | -- | -- |
| 31.5 | 0.263 | 10.7 | -0.0178 | 0.699 | -- | -- | -- | 0.254 | 1.18 | -- | -- | -- | -- |
| 44.33 | 0.31 | 10.7 | -0.294 | -- | -1.04 | -- | -- | 0.0296 | -- | 27.76 | 966 | -- | -- |
| 24.93 | 0.233 | 10.7 | -- | 0.64 | -0.629 | -- | -- | 0.149 | 1.5 | 24.5 | 726 | -- | -- |
| 61.73 | 0.367 | 10.7 | 0.00901 | -- | -- | -- | -- | 0.268 | -- | -- | -- | -- | -- |
| 31.51 | 0.263 | 10.7 | -- | 0.698 | -- | -- | -- | 0.256 | 1.17 | -- | -- | -- | -- |
| 46.39 | 0.317 | 10.7 | -- | -- | -0.915 | -- | -- | 0.0946 | -- | 28 | 972 | -- | -- |
| 61.73 | 0.367 | 10.7 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 15 |
| 5 | 22.17 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 29 | 22.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 41 | 22.52 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 86 | 22.73 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 116 | 22.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 221 | 23.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 342 | 23.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 416 | 23.71 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 549 | 23.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 551 | 23.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 623 | 23.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 644 | 23.96 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 771 | 24.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 795 | 24.03 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 847 | 24.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 989 | 24.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 5 |