BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0312400 Os11g0312400|D10335
(243 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0312400 Adenylate kinase B (EC 2.7.4.3) (ATP-AMP trans... 496 e-141
Os12g0236400 Adenylate kinase A (EC 2.7.4.3) (ATP-AMP trans... 456 e-129
Os08g0109300 Similar to Adenylate kinase, chloroplast (EC 2... 141 3e-34
Os03g0130400 Adenylate kinase, subfamily protein 119 3e-27
Os08g0288200 Adenylate kinase family protein 117 7e-27
Os06g0109600 Similar to Uridylate kinase (EC 2.7.4.-) (UK) ... 93 1e-19
Os02g0778400 Similar to UMP/CMP kinase a (EC 2.7.1.48) 88 4e-18
Os07g0624700 UMP/CMP kinase a (EC 2.7.1.48) 86 2e-17
Os08g0118900 Adenylate kinase family protein 75 6e-14
>Os11g0312400 Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase)
Length = 243
Score = 496 bits (1276), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAAAANLEDVPSMDLMNELLRRMKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLA 60
MAAAANLEDVPSMDLMNELLRRMKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLA
Sbjct: 1 MAAAANLEDVPSMDLMNELLRRMKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLA 60
Query: 61 TGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTV 120
TGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTV
Sbjct: 61 TGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTV 120
Query: 121 VQAQKLDEMLEKKGTKVDKVLNFAIDDSILEERITGRWIHPSSGRSYHTKFAPPKVPGVD 180
VQAQKLDEMLEKKGTKVDKVLNFAIDDSILEERITGRWIHPSSGRSYHTKFAPPKVPGVD
Sbjct: 121 VQAQKLDEMLEKKGTKVDKVLNFAIDDSILEERITGRWIHPSSGRSYHTKFAPPKVPGVD 180
Query: 181 DVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSKKALVANLHAEKPPKEVTAEVQK 240
DVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSKKALVANLHAEKPPKEVTAEVQK
Sbjct: 181 DVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSKKALVANLHAEKPPKEVTAEVQK 240
Query: 241 VLS 243
VLS
Sbjct: 241 VLS 243
>Os12g0236400 Adenylate kinase A (EC 2.7.4.3) (ATP-AMP transphosphorylase)
Length = 241
Score = 456 bits (1172), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/240 (90%), Positives = 230/240 (95%)
Query: 4 AANLEDVPSMDLMNELLRRMKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGD 63
AANLEDVPSM+LM ELLRRMKCSSKPDKR+ILVGPPG GKGTQSP+IKDE+CLCHLATGD
Sbjct: 2 AANLEDVPSMELMTELLRRMKCSSKPDKRVILVGPPGCGKGTQSPLIKDEFCLCHLATGD 61
Query: 64 MLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQA 123
MLRAAVAAKTPLG+KAKEAMDKGELVSDDLVVGIIDEAMKK SCQKGFILDGFPRTVVQA
Sbjct: 62 MLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKTSCQKGFILDGFPRTVVQA 121
Query: 124 QKLDEMLEKKGTKVDKVLNFAIDDSILEERITGRWIHPSSGRSYHTKFAPPKVPGVDDVT 183
QKLDEML K+GTK+DKVLNFAIDD+ILEERITGRWIHPSSGRSYHTKFAPPK PG+DDVT
Sbjct: 122 QKLDEMLAKQGTKIDKVLNFAIDDAILEERITGRWIHPSSGRSYHTKFAPPKTPGLDDVT 181
Query: 184 GEPLIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSKKALVANLHAEKPPKEVTAEVQKVLS 243
GEPLIQRKDDTA VLKSRLEAFH QT+PVIDYY+KK +VANLHAEKPPKEVT EVQK LS
Sbjct: 182 GEPLIQRKDDTAAVLKSRLEAFHVQTKPVIDYYTKKGIVANLHAEKPPKEVTVEVQKALS 241
>Os08g0109300 Similar to Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP
transphosphorylase)
Length = 290
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 128/213 (60%), Gaps = 11/213 (5%)
Query: 32 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 91
++++ G P SGKGTQ +IK +Y L H++ GD+LRA +AA + G +AKE M+KG+LV D
Sbjct: 75 KVMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPD 134
Query: 92 DLVVGIIDEAMKKPSCQ-KGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSIL 150
++VV ++ E + +P Q KG++LDG+PR+ QA L+ + + D + + D +L
Sbjct: 135 EIVVNMVKERLLQPDAQEKGWLLDGYPRSYSQAMALETL----NIRPDIFILLDVPDELL 190
Query: 151 EERITGRWIHPSSGRSYHTKFAPPKVPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTE 210
ER+ GR + P +G+ YH K++PP+ ++ L QR DDT E +K RL+ ++ E
Sbjct: 191 VERVVGRRLDPVTGKIYHLKYSPPE----NEEIASRLTQRFDDTEEKVKLRLQTHYQNVE 246
Query: 211 PVIDYYSKKALVANLHAEKPPKEVTAEVQKVLS 243
++ Y ++ + + +V AE+ K L+
Sbjct: 247 SLLSIYED--VIVEVKGDALVDDVFAEIDKQLT 277
>Os03g0130400 Adenylate kinase, subfamily protein
Length = 293
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 123/214 (57%), Gaps = 22/214 (10%)
Query: 22 RMKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKE 81
R + + + + + + +G PG GKGT + + + H+ATGD++R +A+ PL V+ E
Sbjct: 52 RQRVAEERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAE 111
Query: 82 AMDKGELVSDDLVVGIIDEAMKKPSCQ--KGFILDGFPRTVVQAQKLDEMLEKKGTKVDK 139
+++G+LVSD++++ ++ + +KK Q GFILDGFPRTV QA+ LD + T +D
Sbjct: 112 IVNQGKLVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQAEILDGV-----TDIDM 166
Query: 140 VLNFAIDDSILEERITGRWIHPSSGRSYHTK-------------FAPPKVPGVDDVTGEP 186
V+N + + +L E+ GR I G++++ + P +P + ++
Sbjct: 167 VVNLKLREDVLVEKCLGRRICGQCGKNFNLACIDVKGENGLPPIYMAPLLPPNNCMS--K 224
Query: 187 LIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSKKA 220
LI R DDT EV+++RL+ ++ ++PV +Y ++
Sbjct: 225 LITRADDTEEVVRNRLQIYNDMSQPVEGFYRQQG 258
>Os08g0288200 Adenylate kinase family protein
Length = 493
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 11/188 (5%)
Query: 57 CHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSC-QKGFILDG 115
H++TGD+LRA V++ T +G KAKE MD G LV D +V ++ + +P ++G++LDG
Sbjct: 1 VHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLLDG 60
Query: 116 FPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILEERITGRWIHPSSGRSYHTKFAPPK 175
+PR+ QAQ L+ M + D + + D IL +R GR + P +G+ YH K PP+
Sbjct: 61 YPRSYAQAQSLESM----KIRPDIFIVLEVPDDILIDRCVGRRLDPETGKIYHIKNFPPE 116
Query: 176 VPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSK--KALVANLHAEKPPKE 233
+D L+ R DDT E +KSRL+ + + +E VI YS + N E E
Sbjct: 117 ----NDEVSARLVTRSDDTFEKVKSRLDTYKQNSEAVIPTYSDLLNQIDGNRQVEVVFNE 172
Query: 234 VTAEVQKV 241
+ + +QK+
Sbjct: 173 IDSLLQKI 180
>Os06g0109600 Similar to Uridylate kinase (EC 2.7.4.-) (UK) (Uridine
monophosphate kinase) (UMP kinase) (UMP/CMP kinase)
Length = 243
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 33 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDD 92
+ ++G PGSGKGTQ I ++ HL+ GD+LR T G K M++G+LVS D
Sbjct: 22 VFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGKLVSSD 81
Query: 93 LVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILEE 152
L+V ++ +AM++ K F++DGFPR + ++ ++ ID S +E
Sbjct: 82 LIVKLLFKAMRESGNDK-FLVDGFPRNEENRHAYENIIH-----IEPEFLLFIDCS--KE 133
Query: 153 RITGRWIHPSSGRSYHTKFAPPKVPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPV 212
+ R ++ + GR DD + ++ R + F +QT PV
Sbjct: 134 EMERRILNRNQGRD-------------------------DDNIDTIRRRFDVFQQQTLPV 168
Query: 213 IDYYSKKALVANLHAEKPPKEVTAEVQKVLS 243
I YY K+ + + + EV +V+ + +
Sbjct: 169 IQYYEKRGKLRKVDGNRQVDEVFEDVKAIFA 199
>Os02g0778400 Similar to UMP/CMP kinase a (EC 2.7.1.48)
Length = 214
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 37/213 (17%)
Query: 33 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDD 92
+ ++G PGSGKGTQ I + + HL+ GD+LRA + + + G + + +G++V +
Sbjct: 30 VFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 89
Query: 93 LVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDK--VLNFAIDDSIL 150
+ + ++ EAM K K F++DGFPR + + TK+ VL F + +
Sbjct: 90 VTIKLLQEAMIKSGNDK-FLIDGFPRNEENRAAFENV-----TKITPAFVLFFDCSEEEM 143
Query: 151 EERITGRWIHPSSGRSYHTKFAPPKVPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTE 210
E R+ GR + GR DD E ++ R + F + +
Sbjct: 144 ERRLLGR----NQGRV-------------------------DDNIETIRKRFKVFVESSL 174
Query: 211 PVIDYYSKKALVANLHAEKPPKEVTAEVQKVLS 243
PVI+YY+ K V + A KP EV +V+ + +
Sbjct: 175 PVIEYYNAKDKVKKIDAAKPIPEVFEDVKAIFA 207
>Os07g0624700 UMP/CMP kinase a (EC 2.7.1.48)
Length = 210
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 37/213 (17%)
Query: 33 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDD 92
+ ++G PGSGKGTQ I + + HL+ GD+LRA + + + G + + +G++V +
Sbjct: 27 VFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 86
Query: 93 LVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDK--VLNFAIDDSIL 150
+ + ++ +AM K K F++DGFPR + + TK+ VL F + +
Sbjct: 87 VTIKLLQDAMIKNENDK-FLIDGFPRNEENRAAFENV-----TKISPAFVLFFDCSEEEM 140
Query: 151 EERITGRWIHPSSGRSYHTKFAPPKVPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTE 210
E R+ GR + GR DD E ++ R + F + +
Sbjct: 141 ERRLLGR----NQGRV-------------------------DDNIETIRKRFKVFVESSL 171
Query: 211 PVIDYYSKKALVANLHAEKPPKEVTAEVQKVLS 243
PVI++Y+ K V + A KP EV +V+ + +
Sbjct: 172 PVIEHYNAKNKVKKIDAAKPISEVFEDVKAIFA 204
>Os08g0118900 Adenylate kinase family protein
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 19/213 (8%)
Query: 32 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 91
+ +++G PG K + + + + +++ G ++R ++ + L K ++++G+LV +
Sbjct: 72 QWVVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLVPE 131
Query: 92 DLVVGIIDEAMKK--PSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSI 149
D++ G++ + +++ + GFILDG PRT +QA+ LDE+++ +D VLNF D+
Sbjct: 132 DIIFGLLTKRLEEGYNKGETGFILDGIPRTHMQAEILDEIVD-----IDLVLNFKCADNC 186
Query: 150 LEERITGRWIHPSSGRSY-HTKFAPP-KVPGVDDVTGEPLIQRKDDTAEVL---KSRLE- 203
+R G I P G+ + +K A + P + T +Q A VL SR+E
Sbjct: 187 FMKRRFGGDICPHCGQLFDFSKTASSDRNPSLGSCTWPSQVQH----AAVLGLEDSRMEK 242
Query: 204 --AFHKQTEPVIDYYSKKALVANLHAEKPPKEV 234
A+ +QT+ + DYY K+ + L P E
Sbjct: 243 MRAYAEQTKLLEDYYRKQRKLMELKTSARPGET 275
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,950,990
Number of extensions: 383330
Number of successful extensions: 890
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 878
Number of HSP's successfully gapped: 9
Length of query: 243
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 145
Effective length of database: 11,918,829
Effective search space: 1728230205
Effective search space used: 1728230205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 154 (63.9 bits)