BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0226800 Os11g0226800|AF456245
(99 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0226800 Similar to NBS-LRR disease resistance protein ... 178 9e-46
Os11g0227800 Disease resistance protein family protein 116 3e-27
Os11g0227100 Disease resistance protein family protein 113 3e-26
Os11g0229400 Similar to NBS-LRR protein (Fragment) 110 3e-25
Os11g0229500 Similar to NBS-LRR protein (Fragment) 108 1e-24
Os11g0226933 Disease resistance protein family protein 103 3e-23
Os11g0227200 Similar to NBS-LRR disease resistance protein ... 99 6e-22
Os11g0229300 Similar to NBS-LRR protein (Fragment) 99 8e-22
Os11g0227700 Similar to NBS-LRR protein (Fragment) 99 1e-21
Os11g0224900 Similar to NBS-LRR protein (Fragment) 97 2e-21
Os11g0229700 92 6e-20
Os11g0227400 90 3e-19
Os11g0228800 Protein kinase-like domain containing protein 89 7e-19
>Os11g0226800 Similar to NBS-LRR disease resistance protein homologue
Length = 99
Score = 178 bits (451), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 87/99 (87%)
Query: 1 TTCIVQTFWFFLQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGI 60
TTCIVQTFWFFLQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGI
Sbjct: 1 TTCIVQTFWFFLQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGI 60
Query: 61 ESXXXXXXXXXXXXHRDFKTQWHKNRMHQKMQHVPEIRV 99
ES HRDFKTQWHKNRMHQKMQHVPEIRV
Sbjct: 61 ESLRTLKKLWLLYLHRDFKTQWHKNRMHQKMQHVPEIRV 99
>Os11g0227800 Disease resistance protein family protein
Length = 913
Score = 116 bits (291), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/87 (62%), Positives = 64/87 (73%)
Query: 13 QSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXX 72
++FPHLKTLVL HMP+VNQ+ I DGALP IEGLY+VSL KLD VP+GIES
Sbjct: 825 EAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLM 884
Query: 73 XXHRDFKTQWHKNRMHQKMQHVPEIRV 99
H+DFKTQW+ + MHQKM H+ EI V
Sbjct: 885 DLHKDFKTQWNGDVMHQKMLHIAEIHV 911
>Os11g0227100 Disease resistance protein family protein
Length = 1471
Score = 113 bits (282), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 64/92 (69%)
Query: 6 QTFWFFLQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXX 65
+T ++FPHLKTLVL HMP+VNQ+ I DGALP IEGLY+VSL KLD VP+GIES
Sbjct: 764 KTLVLDAEAFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLWKLDKVPQGIESLAS 823
Query: 66 XXXXXXXXXHRDFKTQWHKNRMHQKMQHVPEI 97
H+DFKTQW + MHQKM HV EI
Sbjct: 824 LKKLWLKDLHKDFKTQWKGDGMHQKMLHVAEI 855
>Os11g0229400 Similar to NBS-LRR protein (Fragment)
Length = 905
Score = 110 bits (274), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/85 (61%), Positives = 61/85 (71%)
Query: 15 FPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXXXX 74
FP LKTL LK MP+VN L+I+ GAL IEGLYVVSL KLD +PEGIES
Sbjct: 819 FPQLKTLALKRMPDVNHLEIIGGALQHIEGLYVVSLPKLDTIPEGIESLRYLKKLWLLGL 878
Query: 75 HRDFKTQWHKNRMHQKMQHVPEIRV 99
H++F++QW KN M QKMQHVPE+RV
Sbjct: 879 HKNFRSQWEKNGMQQKMQHVPELRV 903
>Os11g0229500 Similar to NBS-LRR protein (Fragment)
Length = 901
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 63/95 (66%)
Query: 5 VQTFWFFLQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXX 64
T FP LKTLVLK MP+VN L+I+ GAL IEGLYVVSL KLD VP+GIES
Sbjct: 805 ASTLVLSADCFPQLKTLVLKRMPDVNHLEIIGGALQHIEGLYVVSLPKLDNVPQGIESLR 864
Query: 65 XXXXXXXXXXHRDFKTQWHKNRMHQKMQHVPEIRV 99
H++F++QW KN MHQKMQHVPE+ V
Sbjct: 865 YLKKLWLLGLHKNFRSQWQKNGMHQKMQHVPELHV 899
>Os11g0226933 Disease resistance protein family protein
Length = 645
Score = 103 bits (257), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/87 (58%), Positives = 61/87 (70%)
Query: 13 QSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXX 72
++FP LKTLVL+ MP+V Q+KIMDGALP IE LY+V L KLD VP+GIES
Sbjct: 559 KAFPKLKTLVLRQMPDVKQIKIMDGALPCIECLYIVLLPKLDKVPQGIESLNSLKKLSLL 618
Query: 73 XXHRDFKTQWHKNRMHQKMQHVPEIRV 99
H+DFK QW+ N MH+KM HV EI V
Sbjct: 619 NLHKDFKIQWNGNEMHKKMLHVAEICV 645
>Os11g0227200 Similar to NBS-LRR disease resistance protein homologue
Length = 912
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 5 VQTFWFFLQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXX 64
+T ++FP LK LVLKHMP+VNQ++IM+GALP IEGLY+V LS ++ VP GIE+
Sbjct: 818 TKTLVLDAKAFPRLKMLVLKHMPDVNQIQIMNGALPVIEGLYIVFLSGVESVPPGIETLR 877
Query: 65 XXXXXXXXXXHRDFKTQWHKNRMHQKMQHVPEI 97
H++FK W + M QKMQHVPE+
Sbjct: 878 TLKKLWLLNLHKNFKADWIEREMQQKMQHVPEL 910
>Os11g0229300 Similar to NBS-LRR protein (Fragment)
Length = 490
Score = 98.6 bits (244), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%)
Query: 14 SFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXXX 73
SFP LKT+VLK MPNVN+LKI D ALP IEGLY+ SL+ L+ VP GIE+
Sbjct: 405 SFPKLKTIVLKLMPNVNRLKIADDALPVIEGLYIDSLAGLERVPVGIENLFSLKKLWLLN 464
Query: 74 XHRDFKTQWHKNRMHQKMQHVPEIRV 99
H+DFK W MH+KMQHVP++RV
Sbjct: 465 LHQDFKADWIHREMHRKMQHVPDLRV 490
>Os11g0227700 Similar to NBS-LRR protein (Fragment)
Length = 781
Score = 98.6 bits (244), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/86 (56%), Positives = 57/86 (66%)
Query: 14 SFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXXX 73
SFP LKT+VLK MPNVN+LKI D ALP IEGLY SL L+ VP GIE+
Sbjct: 696 SFPKLKTIVLKLMPNVNRLKIADDALPVIEGLYNDSLPGLERVPVGIENLFSLKKLWLLN 755
Query: 74 XHRDFKTQWHKNRMHQKMQHVPEIRV 99
H+DFK W MH+KMQHVP++RV
Sbjct: 756 LHQDFKADWIHREMHRKMQHVPDLRV 781
>Os11g0224900 Similar to NBS-LRR protein (Fragment)
Length = 1021
Score = 97.4 bits (241), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 60/87 (68%)
Query: 13 QSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXX 72
+SFP LKTLVL++M NVN LKI AL IEGLY+VSLS L VPEGIES
Sbjct: 931 KSFPLLKTLVLRNMSNVNLLKIGADALKCIEGLYIVSLSNLKSVPEGIESLSSLKKLTLL 990
Query: 73 XXHRDFKTQWHKNRMHQKMQHVPEIRV 99
H DFK +W+K RMH+KM+HV ++RV
Sbjct: 991 GLHNDFKAEWNKKRMHEKMKHVTKLRV 1017
>Os11g0229700
Length = 319
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%)
Query: 14 SFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXXX 73
+FP LKTLV KHMP+VNQLKI+ GALP IEGLY+V+LS L+ VP GIE+
Sbjct: 234 AFPCLKTLVRKHMPDVNQLKIISGALPVIEGLYIVALSGLESVPSGIETLRTLKKLWLVD 293
Query: 74 XHRDFKTQWHKNRMHQKMQHVPEI 97
H DF+ W ++ M QKMQH+ E+
Sbjct: 294 LHWDFEAHWIESEMDQKMQHLQEL 317
>Os11g0227400
Length = 79
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%)
Query: 21 LVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXXXXXXXHRDFKT 80
+VLKHMP+VNQL + GALP IEGLY+VSL +L+ VP+GIE+ H+ FK+
Sbjct: 1 MVLKHMPDVNQLVVAGGALPVIEGLYIVSLPELERVPQGIETLCSLKKLWLLNLHKYFKS 60
Query: 81 QWHKNRMHQKMQHVPEIRV 99
W MHQKMQHVP++RV
Sbjct: 61 HWTDGEMHQKMQHVPDLRV 79
>Os11g0228800 Protein kinase-like domain containing protein
Length = 491
Score = 89.0 bits (219), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 10 FFLQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESXXXXXXX 69
+ ++F LK+LVLK MP+VNQ+ I+ G+L IE LY+++L LD VP GIES
Sbjct: 300 LYAENFFRLKSLVLKDMPHVNQINIIGGSLSCIEALYILALPNLDKVPLGIESILSLKKL 359
Query: 70 XXXXXHRDFKTQWHKNRMHQKMQHVPE 96
H DF+ QW+ + MHQKMQH+PE
Sbjct: 360 WLLGLHMDFRKQWNNSGMHQKMQHIPE 386
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.138 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,743,427
Number of extensions: 76551
Number of successful extensions: 353
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 353
Number of HSP's successfully gapped: 13
Length of query: 99
Length of database: 17,035,801
Length adjustment: 68
Effective length of query: 31
Effective length of database: 13,485,249
Effective search space: 418042719
Effective search space used: 418042719
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 149 (62.0 bits)