Os11g0228800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0228800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 364.32 | 0.897 | 3.36 | -0.29 | 0.248 | -4.11 | 0.0635 | 18.3 | -0.418 | 21.8 | 50.48 | 218 | -- | -- |
| 372.12 | 0.898 | 3.42 | -0.423 | 0.124 | 2.92 | -0.183 | -- | -0.265 | 23.6 | 47.99 | 216 | -- | -- |
| 363.28 | 0.888 | 3.36 | -0.325 | 0.251 | -5 | -- | 20.2 | -0.41 | 21.7 | 49.69 | 189 | -- | -- |
| 368.83 | 0.894 | 3.42 | -0.601 | 0.192 | 3.47 | -- | -- | -0.39 | 23.4 | 48 | 216 | -- | -- |
| 366.24 | 0.891 | 3.34 | -0.296 | -- | -6.88 | -- | 25.2 | -0.428 | -- | 49.1 | 189 | -- | -- |
| 387.88 | 0.923 | 3.42 | -0.465 | 0.182 | -- | -0.0917 | -- | -0.406 | 21.8 | -- | -- | -- | -- |
| 387.91 | 0.922 | 3.42 | -0.461 | 0.182 | -- | -- | -- | -0.405 | 21.7 | -- | -- | -- | -- |
| 371.23 | 0.897 | 3.41 | -0.597 | -- | 3.38 | -- | -- | -0.389 | -- | 48 | 218 | -- | -- |
| 378.07 | 0.906 | 3.41 | -- | 0.194 | 3.1 | -- | -- | -0.33 | 22.7 | 47 | 194 | -- | -- |
| 389.89 | 0.923 | 3.42 | -0.459 | -- | -- | -- | -- | -0.406 | -- | -- | -- | -- | -- |
| 393.52 | 0.928 | 3.41 | -- | 0.182 | -- | -- | -- | -0.354 | 21.5 | -- | -- | -- | -- |
| 380.2 | 0.908 | 3.4 | -- | -- | 3.08 | -- | -- | -0.33 | -- | 47 | 185 | -- | -- |
| 395.46 | 0.928 | 3.41 | -- | -- | -- | -- | -- | -0.355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 357.71 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 2 | 358.15 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 3 | 358.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 4 | 358.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 7 | 358.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 8 | 358.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 9 | 358.98 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 11 | 359.09 | humidity | 50.0 | 90 | > th | dose independent | sin | 13 | NA |
| 22 | 359.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 23 | 359.75 | humidity | 50.0 | 90 | < th | dose independent | sin | 13 | NA |
| 28 | 359.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 32 | 360.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 33 | 360.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 34 | 360.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 35 | 360.26 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 2 |
| 36 | 360.26 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 2 |
| 39 | 360.41 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 59 | 360.43 | humidity | 50.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 69 | 360.66 | humidity | 50.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 70 | 360.67 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 11 |
| 75 | 360.86 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 7 | 11 |
| 83 | 361.10 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 7 | 12 |
| 88 | 361.19 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 5 |
| 123 | 361.51 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 145 | 361.66 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 148 | 361.66 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 172 | 362.05 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 174 | 362.05 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 180 | 362.15 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 190 | 362.25 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 194 | 362.27 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 198 | 362.29 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 7 | 4 |
| 227 | 362.37 | wind | 5.0 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 297 | 362.65 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 300 | 362.69 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 321 | 362.76 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 326 | 362.81 | humidity | 50.0 | 10 | < th | dose independent | rect. | 14 | 4 |
| 347 | 362.84 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 350 | 362.86 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 10 | 5 |
| 351 | 362.87 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 368 | 362.88 | humidity | 50.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 402 | 363.06 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 421 | 363.14 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 439 | 363.27 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 22 | 4 |
| 440 | 363.29 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 22 | 9 |
| 472 | 363.43 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 479 | 363.46 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 517 | 363.57 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 575 | 363.74 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 610 | 363.83 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 618 | 363.85 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 627 | 363.88 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 640 | 363.91 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 643 | 363.92 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 711 | 363.99 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 734 | 364.05 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 768 | 364.09 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 776 | 364.11 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 781 | 364.12 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 787 | 364.13 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 802 | 364.16 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 815 | 364.20 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 817 | 364.20 | radiation | 10.0 | 90 | < th | dose independent | rect. | 7 | 3 |
| 846 | 364.24 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 863 | 364.28 | humidity | 50.0 | 270 | < th | dose independent | sin | 7 | NA |
| 892 | 364.31 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 941 | 364.38 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 986 | 364.48 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 20 |