Os11g0224900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR protein (Fragment).
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Os11g0224900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.95 | 0.644 | 6.97 | 0.71 | 0.268 | 1.77 | -0.115 | 1.62 | 0.154 | 13.7 | 48 | 1293 | -- | -- |
| 191.82 | 0.645 | 6.96 | 0.875 | 0.266 | 1.88 | 0.0791 | -- | 0.188 | 13.7 | 48 | 1285 | -- | -- |
| 187.87 | 0.638 | 6.97 | 0.701 | 0.244 | 1.81 | -- | 1.63 | 0.153 | 13.9 | 49.04 | 1272 | -- | -- |
| 191.8 | 0.645 | 6.96 | 0.885 | 0.235 | 1.93 | -- | -- | 0.188 | 14 | 48 | 1272 | -- | -- |
| 189.85 | 0.642 | 6.97 | 0.717 | -- | 1.96 | -- | 1.63 | 0.153 | -- | 49 | 1206 | -- | -- |
| 272.9 | 0.774 | 6.97 | 0.761 | 0.569 | -- | 0.37 | -- | 0.111 | 13.7 | -- | -- | -- | -- |
| 273.43 | 0.774 | 6.97 | 0.773 | 0.57 | -- | -- | -- | 0.114 | 13.8 | -- | -- | -- | -- |
| 193.64 | 0.648 | 6.96 | 0.889 | -- | 2.09 | -- | -- | 0.187 | -- | 48 | 1205 | -- | -- |
| 212.31 | 0.679 | 6.98 | -- | 0.206 | 1.89 | -- | -- | 0.0946 | 14.1 | 52 | 1263 | -- | -- |
| 293.14 | 0.8 | 6.98 | 0.75 | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
| 289.18 | 0.795 | 6.99 | -- | 0.556 | -- | -- | -- | 0.0274 | 13.7 | -- | -- | -- | -- |
| 214.19 | 0.682 | 6.98 | -- | -- | 2 | -- | -- | 0.0938 | -- | 52 | 1210 | -- | -- |
| 307.97 | 0.819 | 7 | -- | -- | -- | -- | -- | 0.0175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.77 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 2 | 187.83 | humidity | 50 | 1440 | > th | dose dependent | sin | 16 | NA |
| 5 | 187.96 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 6 | 188.14 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 9 |
| 8 | 188.21 | humidity | 90 | 1440 | < th | dose dependent | sin | 15 | NA |
| 10 | 188.26 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 33 | 189.05 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 64 | 189.66 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 72 | 189.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 82 | 189.83 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 86 | 189.85 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 103 | 190.01 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 133 | 190.29 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 139 | 190.33 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 21 |
| 204 | 190.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 250 | 191.09 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 267 | 191.20 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 296 | 191.42 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 331 | 191.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 359 | 191.87 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 364 | 191.87 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 539 | 192.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 682 | 193.98 | humidity | 70 | 1440 | < th | dose independent | sin | 15 | NA |
| 764 | 194.52 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 770 | 194.56 | humidity | 70 | 1440 | > th | dose independent | sin | 15 | NA |
| 808 | 194.79 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 868 | 195.18 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 874 | 195.21 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 894 | 195.24 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |