BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0197400 Os11g0197400|AK120356
(139 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0197400 Protein of unknown function DUF803 family protein 180 3e-46
Os01g0882300 Protein of unknown function DUF803 family protein 133 5e-32
Os05g0424800 Similar to AER274Wp 128 2e-30
AK073285 120 2e-28
Os01g0873700 Protein of unknown function DUF803 family protein 112 7e-26
Os05g0430700 Protein of unknown function DUF803 family protein 110 4e-25
Os02g0498300 Protein of unknown function DUF803 family protein 109 7e-25
Os05g0513400 Protein of unknown function DUF803 family protein 108 2e-24
Os06g0715700 Protein of unknown function DUF803 family protein 105 9e-24
Os04g0373000 Protein of unknown function DUF803 family protein 105 1e-23
>Os11g0197400 Protein of unknown function DUF803 family protein
Length = 139
Score = 180 bits (457), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 94/139 (67%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
TVIVGEI ILVTP QEKLHTFGILGCVLCVVGSI
Sbjct: 1 TVIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHAILQEKLHTFGILGCVLCVVGSI 60
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
TIVLHAPQERNIDSVREVWDLATEPGFLC PQHGQTNIMVYIGV
Sbjct: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCYAAIVVAAALVLIYFVVPQHGQTNIMVYIGV 120
Query: 121 CSLLGSLTVRFLSKYMTQS 139
CSLLGSLTVRFLSKYMTQS
Sbjct: 121 CSLLGSLTVRFLSKYMTQS 139
>Os01g0882300 Protein of unknown function DUF803 family protein
Length = 360
Score = 133 bits (334), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 77/129 (59%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
T+IVGE+ ILVTP +EKLH FGILGCVLCVVGS
Sbjct: 80 TMIVGEVANFAAYAFAPAILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGST 139
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
TIVLHAPQER IDSV EVW LATEP FL PQ+GQT+IMVYIGV
Sbjct: 140 TIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGV 199
Query: 121 CSLLGSLTV 129
CSL+GSL+V
Sbjct: 200 CSLVGSLSV 208
>Os05g0424800 Similar to AER274Wp
Length = 358
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 76/129 (58%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
+IVGEI ILVTP +EKLH FGILGC+LCVVGS
Sbjct: 71 AMIVGEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGST 130
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
+IVLHAP ER I+SV EVWDLATEP FL PQ+GQT+IMVYIGV
Sbjct: 131 SIVLHAPPERQIESVAEVWDLATEPAFLLYAAIVLAAAFVLIFHFVPQYGQTHIMVYIGV 190
Query: 121 CSLLGSLTV 129
CSL+GSL+V
Sbjct: 191 CSLVGSLSV 199
>AK073285
Length = 361
Score = 120 bits (302), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 76/129 (58%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
T++VGE+ ILVTP ++KLH FGILGC+LCVVGS
Sbjct: 81 TMVVGEVANFAAYAFAPAILVTPLGALSIIISAILAHFMLRKKLHIFGILGCILCVVGST 140
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
TIVLHAP ER I+SV EVWDLATEP F+ P +GQT++MVYIGV
Sbjct: 141 TIVLHAPAEREIESVTEVWDLATEPAFMFYVSVVLAMVAILVCRFVPLYGQTHVMVYIGV 200
Query: 121 CSLLGSLTV 129
CSL+GS++V
Sbjct: 201 CSLVGSISV 209
>Os01g0873700 Protein of unknown function DUF803 family protein
Length = 363
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 70/129 (54%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
T++VGEI +LVTP EKL G+LGCVLC+VGS
Sbjct: 77 TMLVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRVGVLGCVLCIVGST 136
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
I+LHAPQER SV E+W LA +P FLC P++GQ NIMVY+G+
Sbjct: 137 VIILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGI 196
Query: 121 CSLLGSLTV 129
CS++GSLTV
Sbjct: 197 CSVIGSLTV 205
>Os05g0430700 Protein of unknown function DUF803 family protein
Length = 355
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 70/129 (54%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
T+++GEI +LVTP EKL G+LGCVLC+VGS
Sbjct: 70 TMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGST 129
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
I+LHAP+E SV ++W LAT+P FLC P++GQTNI VYIG+
Sbjct: 130 VIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGI 189
Query: 121 CSLLGSLTV 129
CS++GSLTV
Sbjct: 190 CSVIGSLTV 198
>Os02g0498300 Protein of unknown function DUF803 family protein
Length = 268
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 71/129 (55%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
T+I+GE+ +LVTP +EKLH FG++GC+LCVVGS+
Sbjct: 3 TMILGEVANFAAYAFAPAVLVTPLGALSIIFSAVLAHFVLKEKLHMFGVVGCILCVVGSV 62
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
IVLHAP+ER IDS+ E+W LATEPGF+ + G ++VYI +
Sbjct: 63 GIVLHAPKEREIDSIDEIWHLATEPGFIVYSCVAVVSVLFLIFWVAERSGHRKMLVYIAI 122
Query: 121 CSLLGSLTV 129
CS +GSLTV
Sbjct: 123 CSTMGSLTV 131
>Os05g0513400 Protein of unknown function DUF803 family protein
Length = 354
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
T+IVGE+ +LVTP E+LH G+LGCV+C+ GS+
Sbjct: 70 TMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSV 129
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
IV+HAPQE+ I SVRE+W++A +P FL P +GQ+N+++Y +
Sbjct: 130 VIVIHAPQEQEITSVREIWNMAIQPAFLLYVASVIVVVFVLVFHFSPLYGQSNVLIYTAI 189
Query: 121 CSLLGSLTV 129
CSL+GSL+V
Sbjct: 190 CSLMGSLSV 198
>Os06g0715700 Protein of unknown function DUF803 family protein
Length = 344
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 72/129 (55%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
T+++GEI +LVTP +E+L G+LGCV C+VGS+
Sbjct: 60 TMLLGEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLGCVSCIVGSV 119
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
+V+HAPQE +SV E+W+LA +PGFL P++GQTNIM+Y+G+
Sbjct: 120 IVVIHAPQEHMPNSVEEIWNLAIQPGFLTYAVATLVVVAALVLFFEPRYGQTNIMIYLGI 179
Query: 121 CSLLGSLTV 129
CS +GSLTV
Sbjct: 180 CSSMGSLTV 188
>Os04g0373000 Protein of unknown function DUF803 family protein
Length = 317
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%)
Query: 1 TVIVGEIXXXXXXXXXXXILVTPXXXXXXXXXXXXXXXXXQEKLHTFGILGCVLCVVGSI 60
+I+GE+ ILVTP +E+LH FGI+GC+LCVVGS+
Sbjct: 61 AMILGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSV 120
Query: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCXXXXXXXXXXXXXXXXXPQHGQTNIMVYIGV 120
IVLHAP+E+ IDSV E+W LAT+PGF+ + Q ++ YI +
Sbjct: 121 GIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAI 180
Query: 121 CSLLGSLTV 129
CSL+GSLTV
Sbjct: 181 CSLMGSLTV 189
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.141 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,809,436
Number of extensions: 67668
Number of successful extensions: 148
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 134
Number of HSP's successfully gapped: 10
Length of query: 139
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 49
Effective length of database: 12,336,541
Effective search space: 604490509
Effective search space used: 604490509
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 151 (62.8 bits)