Os01g0873700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF803 family protein.
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Os01g0873700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF803 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.96 | 0.176 | 11.3 | 0.784 | 0.338 | -1.14 | -0.111 | 0.5 | 0.155 | 23.9 | 8.072 | 621 | -- | -- |
| 14.14 | 0.175 | 11.3 | 0.698 | 0.334 | -1.13 | -0.0586 | -- | 0.132 | 23.9 | 13.05 | 614 | -- | -- |
| 14.01 | 0.174 | 11.3 | 0.777 | 0.331 | -1.14 | -- | 0.442 | 0.153 | 23.8 | 8.237 | 604 | -- | -- |
| 14.15 | 0.175 | 11.3 | 0.701 | 0.335 | -1.13 | -- | -- | 0.132 | 23.9 | 13.03 | 614 | -- | -- |
| 15.22 | 0.182 | 11.3 | 0.797 | -- | -1.19 | -- | 0.681 | 0.152 | -- | 8.896 | 204 | -- | -- |
| 29.52 | 0.255 | 11.3 | 0.429 | 0.331 | -- | 0.00455 | -- | -0.0396 | 3.28 | -- | -- | -- | -- |
| 29.52 | 0.254 | 11.3 | 0.429 | 0.331 | -- | -- | -- | -0.0397 | 3.28 | -- | -- | -- | -- |
| 15.19 | 0.182 | 11.3 | 0.676 | -- | -1.19 | -- | -- | 0.125 | -- | 14.18 | 140 | -- | -- |
| 25.27 | 0.234 | 11.3 | -- | 0.216 | -0.695 | -- | -- | 0.0198 | 23.9 | 19.8 | 416 | -- | -- |
| 35.73 | 0.279 | 11.3 | 0.443 | -- | -- | -- | -- | -0.0309 | -- | -- | -- | -- | -- |
| 34.36 | 0.274 | 11.3 | -- | 0.34 | -- | -- | -- | -0.0874 | 3.27 | -- | -- | -- | -- |
| 26.05 | 0.238 | 11.3 | -- | -- | -0.777 | -- | -- | 0.0311 | -- | 19.5 | 132 | -- | -- |
| 40.9 | 0.298 | 11.3 | -- | -- | -- | -- | -- | -0.0801 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 2 | 13.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 7 | 13.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 12 | 13.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 19 | 13.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 51 | 13.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 65 | 14.03 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 92 | 14.19 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 133 | 14.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 137 | 14.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 190 | 14.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 200 | 14.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 218 | 14.68 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 246 | 14.73 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 265 | 14.76 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 269 | 14.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 278 | 14.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 280 | 14.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 283 | 14.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 15 |
| 320 | 14.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 340 | 14.81 | temperature | 30 | 1440 | < th | dose dependent | sin | 18 | NA |
| 377 | 14.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 588 | 14.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 17 |