BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0873700 Os01g0873700|AK103484
(363 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329 369 e-102
AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327 369 e-102
AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344 338 4e-93
AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369 321 4e-88
AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387 320 7e-88
AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336 310 1e-84
AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337 305 2e-83
>AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329
Length = 328
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 224/294 (76%)
Query: 23 NLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMVTMLVGE 82
N KG +LAVASS FIG SFI LEPLWW GMVTM+VGE
Sbjct: 5 NGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIVGE 64
Query: 83 IANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRXXXXXXXXXXXXSTVIILHA 142
ANF+AY++APAVLVTPLGALSII+SAVLAHF L EKL++ S VI++HA
Sbjct: 65 AANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVIVIHA 124
Query: 143 PQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICSVIGS 202
P+E+TP+SV+EIW+LA QP FL Y +++ L L+++ P GQ NI+VY+GICS++G+
Sbjct: 125 PKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLMGA 184
Query: 203 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAAVVSP 262
LTVMSIKA+GIAIKLT+EG++Q GY QTWLF ++++TC+ QL+YLNKALDTFNAA+VSP
Sbjct: 185 LTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIVSP 244
Query: 263 IYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTREPDQ 316
+YY MFTTLTI+ASAIMFKDWSGQ A+ +ASE+CGF+TVL GT++LH TRE +Q
Sbjct: 245 VYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQ 298
>AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327
Length = 326
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 234/327 (71%), Gaps = 13/327 (3%)
Query: 23 NLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMVTMLVGE 82
N G +LAV+SS FIG SFI LEPLWWVG+VTM GE
Sbjct: 5 NEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMTFGE 64
Query: 83 IANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRXXXXXXXXXXXXSTVIILHA 142
IANF+AY++APAVLVTPLGALSII+SAVLAHF L+EKL++ S +I++HA
Sbjct: 65 IANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMIVIHA 124
Query: 143 PQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICSVIGS 202
PQE+TP+SV+EIW LA+QP FL Y ++++ L L++YC P GQ NI+VY+GICS++GS
Sbjct: 125 PQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICSLMGS 184
Query: 203 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAAVVSP 262
LTVMSIKAVGIAIKLT EGINQ Y +TW FA+++ C+ +Q++YLNKALDTFNAA+VSP
Sbjct: 185 LTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAAIVSP 244
Query: 263 IYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTREPDQTLSADL 322
IYY MFTTLTI+ASAIMFKDW+GQ+ IASEICGF+TVL GT++LHSTRE +Q
Sbjct: 245 IYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQA----- 299
Query: 323 YAPLPPKIYWHIQGNGDIGKQKEDDSL 349
P ++ W D GK +++ L
Sbjct: 300 ---SPRRMRWQ-----DSGKSFDEEHL 318
>AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344
Length = 343
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/325 (52%), Positives = 220/325 (67%), Gaps = 4/325 (1%)
Query: 23 NLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMVTMLVGE 82
N+KG +LA++SS FIG SFI EPLWW+GM TML+GE
Sbjct: 19 NIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTTMLLGE 78
Query: 83 IANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRXXXXXXXXXXXXSTVIILHA 142
IANF AY FAPA+LVTPLGA+SII+SAVLAH L EKL ST I+LHA
Sbjct: 79 IANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTTIVLHA 138
Query: 143 PQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICSVIGS 202
PQER SV E+W+LA +P F+ YA+ + ++FL+I P+YGQ N+MVY+GICS++GS
Sbjct: 139 PQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICSLVGS 198
Query: 203 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAAVVSP 262
L+VMS+KA+GIA+KLT G NQ Y QTW+F ++ +TC+ QL YLNKALDTFN A+VSP
Sbjct: 199 LSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTAIVSP 258
Query: 263 IYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTREPDQTLSADL 322
IYY MFT+LTILAS IMFKDW Q+ ++I +EICGF+T+L+GT +LH T++ + S
Sbjct: 259 IYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKDMVEGSS--- 315
Query: 323 YAPLPPKIYWHIQGNGDIGKQKEDD 347
LP +I HI I ++++
Sbjct: 316 -VILPLRISKHINEEEGIPLRRQES 339
>AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369
Length = 368
Score = 321 bits (822), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 160/291 (54%), Positives = 207/291 (71%)
Query: 23 NLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMVTMLVGE 82
N+KG +LA++SS FIG SFI LEPLWWVGM+TM+VGE
Sbjct: 19 NIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIVGE 78
Query: 83 IANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRXXXXXXXXXXXXSTVIILHA 142
IANF AY FAPA+LVTPLGALSII+SA LAH L+EKL S I+LHA
Sbjct: 79 IANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSITIVLHA 138
Query: 143 PQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICSVIGS 202
PQE+ SV ++W+LA +P FL YA A V ++ L++ P+YGQ ++MVY+G+CS++GS
Sbjct: 139 PQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCSLVGS 198
Query: 203 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAAVVSP 262
L+VMS+KA+GIA+KLT G+NQ Y QTW+F +I +TC+ Q+ YLNKALDTFN AVVSP
Sbjct: 199 LSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTAVVSP 258
Query: 263 IYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTRE 313
IYY MFT+LTILAS IMFKDW Q ++I +E+CGF+T+L+GT +LH T++
Sbjct: 259 IYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKD 309
>AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387
Length = 386
Score = 320 bits (820), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 205/291 (70%)
Query: 23 NLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMVTMLVGE 82
N+KG +LA++SS FIG SFI LEPLWW+GM+TM+VGE
Sbjct: 19 NVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMITMIVGE 78
Query: 83 IANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRXXXXXXXXXXXXSTVIILHA 142
IANF AY FAPA+LVTPLGALSII+SA LAH L EKL S I+LHA
Sbjct: 79 IANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVTIVLHA 138
Query: 143 PQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICSVIGS 202
PQE+ SV E+W+LA +P FL YA A V ++ L++ P YGQ ++MVY+G+CS+IGS
Sbjct: 139 PQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCSLIGS 198
Query: 203 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAAVVSP 262
L+VMS+KA+GIA+KLT G NQ GY QTW+F VI + C+ Q+ YLNKALDTFN AVVSP
Sbjct: 199 LSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTAVVSP 258
Query: 263 IYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTRE 313
IYY MFT+LTILAS IMFKDW QS ++I +E+CGF+T+L+GT +LH+T +
Sbjct: 259 IYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTD 309
>AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336
Length = 335
Score = 310 bits (793), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 188/262 (71%)
Query: 68 EPLWWVGMVTMLVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRXXXXX 127
EP WW GM+TM+VGE+ANF AY FAPA+LVTPLGALSII SAVLAHF L EKL
Sbjct: 53 EPWWWAGMITMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILG 112
Query: 128 XXXXXXXSTVIILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQ 187
ST I+LHAP E+ SV +IW LAI+P FL Y+ V V L+ Y PRYG+
Sbjct: 113 CILCVVGSTTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGK 172
Query: 188 MNIMVYVGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVY 247
+++VYVGICS++GSLTVMS+KAV IAIKLT G NQ YF TW+F ++ TC +Q+ Y
Sbjct: 173 THMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINY 232
Query: 248 LNKALDTFNAAVVSPIYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLV 307
LNKALDTFN AV+SP+YY MFTT TI+AS IMFKDW+ QS KIA+E+CGF+T+L+GT +
Sbjct: 233 LNKALDTFNTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFL 292
Query: 308 LHSTREPDQTLSADLYAPLPPK 329
LH T++ + S +P +
Sbjct: 293 LHKTKDMGNSASGRGSISMPTR 314
>AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337
Length = 336
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/252 (58%), Positives = 184/252 (73%)
Query: 68 EPLWWVGMVTMLVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRXXXXX 127
EP WW GM+TM+VGEIANF AY FAPA+LVTPLGALSII SAVLAHF L EKL
Sbjct: 53 EPWWWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILG 112
Query: 128 XXXXXXXSTVIILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQ 187
ST I+LHAP E+ SV ++WHLA +P FL Y+ + V L L+ Y PRYG+
Sbjct: 113 CVLCVVGSTTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGK 172
Query: 188 MNIMVYVGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVY 247
+++VYVGICS++GSLTVMS+KAV IAIKLT G+NQ YF W+F ++ C +Q+ Y
Sbjct: 173 THMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINY 232
Query: 248 LNKALDTFNAAVVSPIYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLV 307
LNKALD FN AV+SP+YY MFTT TILAS IMFKDW+ QS +IA+E+CGF+T+L+GT +
Sbjct: 233 LNKALDNFNTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFL 292
Query: 308 LHSTREPDQTLS 319
LH T++ + S
Sbjct: 293 LHKTKDMGNSTS 304
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,103,164
Number of extensions: 206211
Number of successful extensions: 559
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 550
Number of HSP's successfully gapped: 8
Length of query: 363
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 263
Effective length of database: 8,364,969
Effective search space: 2199986847
Effective search space used: 2199986847
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)