Os05g0430700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF803 family protein.
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Os05g0430700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF803 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.9 | 0.43 | 7.53 | 0.865 | 0.362 | -0.631 | 0.36 | 0.245 | 0.343 | 3.07 | 20.4 | 99 | -- | -- |
| 84.16 | 0.427 | 7.54 | 0.822 | 0.359 | -0.652 | 0.235 | -- | 0.333 | 3.05 | 20.5 | 108 | -- | -- |
| 84.26 | 0.428 | 7.53 | 0.837 | 0.361 | -0.631 | -- | 0.137 | 0.342 | 3.1 | 20.46 | 99 | -- | -- |
| 84.33 | 0.428 | 7.54 | 0.817 | 0.359 | -0.649 | -- | -- | 0.332 | 3.09 | 20.43 | 99 | -- | -- |
| 91.34 | 0.445 | 7.54 | 0.856 | -- | -0.709 | -- | 0.109 | 0.377 | -- | 20.5 | 99 | -- | -- |
| 100.76 | 0.471 | 7.57 | 0.642 | 0.502 | -- | 0.259 | -- | 0.209 | 2.65 | -- | -- | -- | -- |
| 101 | 0.471 | 7.57 | 0.636 | 0.503 | -- | -- | -- | 0.207 | 2.63 | -- | -- | -- | -- |
| 91.2 | 0.445 | 7.53 | 0.86 | -- | -0.755 | -- | -- | 0.361 | -- | 20.4 | 99 | -- | -- |
| 101.04 | 0.468 | 7.56 | -- | 0.408 | -0.498 | -- | -- | 0.221 | 2.96 | 20.49 | 86 | -- | -- |
| 115.77 | 0.503 | 7.57 | 0.657 | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
| 111.66 | 0.494 | 7.58 | -- | 0.515 | -- | -- | -- | 0.137 | 2.65 | -- | -- | -- | -- |
| 109.88 | 0.488 | 7.56 | -- | -- | -0.62 | -- | -- | 0.245 | -- | 20.46 | 101 | -- | -- |
| 127.17 | 0.526 | 7.58 | -- | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.93 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 16 |
| 3 | 77.18 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 16 |
| 13 | 80.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 23 | 80.68 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 30 | 80.97 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 31 | 80.99 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 20 | 15 |
| 36 | 81.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 77 | 82.26 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 22 |
| 87 | 82.47 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 7 | 20 |
| 125 | 83.17 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 23 |
| 138 | 83.35 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 139 | 83.35 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 151 | 83.50 | temperature | 20.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 163 | 83.69 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 164 | 83.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 167 | 83.71 | temperature | 20.0 | 90 | > th | dose independent | sin | 6 | NA |
| 175 | 83.77 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 178 | 83.80 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 181 | 83.82 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 183 | 83.84 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 186 | 83.86 | temperature | 20.0 | 90 | < th | dose independent | sin | 6 | NA |
| 193 | 83.90 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 217 | 84.04 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 218 | 84.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 16 |
| 223 | 84.07 | temperature | 10.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 226 | 84.08 | temperature | 30.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 228 | 84.09 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 238 | 84.14 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 239 | 84.15 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 242 | 84.16 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 248 | 84.19 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 249 | 84.19 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 250 | 84.19 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 256 | 84.22 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 262 | 84.25 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 5 |
| 279 | 84.33 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 284 | 84.37 | temperature | 20.0 | 90 | < th | dose independent | rect. | 10 | 23 |
| 285 | 84.38 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 288 | 84.39 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 298 | 84.43 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 307 | 84.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 312 | 84.49 | temperature | 20.0 | 90 | > th | dose independent | no | NA | NA |
| 317 | 84.50 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 329 | 84.53 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 331 | 84.53 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 338 | 84.57 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 23 |
| 350 | 84.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 23 |
| 361 | 84.64 | temperature | 20.0 | 90 | < th | dose independent | no | NA | NA |
| 368 | 84.66 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 23 |
| 378 | 84.68 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 402 | 84.74 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 436 | 84.87 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 439 | 84.87 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 442 | 84.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 460 | 84.96 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 462 | 84.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 500 | 85.10 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 501 | 85.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 533 | 85.18 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 551 | 85.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 9 |
| 570 | 85.28 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 597 | 85.37 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 17 |
| 614 | 85.43 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 16 |
| 650 | 85.54 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 13 |
| 652 | 85.55 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 657 | 85.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 672 | 85.60 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 718 | 85.72 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 765 | 85.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 768 | 85.82 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 2 |
| 771 | 85.82 | temperature | 20.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 793 | 85.87 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 18 | 18 |
| 945 | 86.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 3 |