BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0430700 Os05g0430700|AK121485
(355 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0430700 Protein of unknown function DUF803 family protein 660 0.0
Os01g0873700 Protein of unknown function DUF803 family protein 556 e-159
Os05g0513400 Protein of unknown function DUF803 family protein 374 e-104
Os06g0715700 Protein of unknown function DUF803 family protein 370 e-102
Os01g0882300 Protein of unknown function DUF803 family protein 352 2e-97
Os05g0424800 Similar to AER274Wp 351 4e-97
AK073285 332 3e-91
Os04g0373000 Protein of unknown function DUF803 family protein 323 2e-88
Os02g0498300 Protein of unknown function DUF803 family protein 285 4e-77
Os11g0197400 Protein of unknown function DUF803 family protein 165 5e-41
>Os05g0430700 Protein of unknown function DUF803 family protein
Length = 355
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/355 (93%), Positives = 331/355 (93%)
Query: 1 MSRAPPDAAGDLFAANLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXL 60
MSRAPPDAAGDLFAANLKGSLLAVASSAFIGVSFI L
Sbjct: 1 MSRAPPDAAGDLFAANLKGSLLAVASSAFIGVSFIVKKKGLRRAGAAGPRAGVGGYGYLL 60
Query: 61 EPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLG 120
EPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLG
Sbjct: 61 EPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLG 120
Query: 121 CVLCIVGSTVIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQ 180
CVLCIVGSTVIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQ
Sbjct: 121 CVLCIVGSTVIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQ 180
Query: 181 TNIAVYIGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIY 240
TNIAVYIGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIY
Sbjct: 181 TNIAVYIGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIY 240
Query: 241 LNKALDTFNTAVVSPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVV 300
LNKALDTFNTAVVSPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVV
Sbjct: 241 LNKALDTFNTAVVSPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVV 300
Query: 301 LHSTREYDQTISPDLYTPLPPIYWHIQGNGETVKQKEDDSLSADFITVVRQDYFV 355
LHSTREYDQTISPDLYTPLPPIYWHIQGNGETVKQKEDDSLSADFITVVRQDYFV
Sbjct: 301 LHSTREYDQTISPDLYTPLPPIYWHIQGNGETVKQKEDDSLSADFITVVRQDYFV 355
>Os01g0873700 Protein of unknown function DUF803 family protein
Length = 363
Score = 556 bits (1433), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/361 (77%), Positives = 298/361 (82%), Gaps = 11/361 (3%)
Query: 6 PDAAG----------DLFAANLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXX 55
PDA G DLFAANLKGSLLAVASSAFIGVSFI
Sbjct: 3 PDATGEAGGGGGGGGDLFAANLKGSLLAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGG 62
Query: 56 XXXXLEPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQR 115
LEPLWWVGM+TML+GEIANF+AYMFAPAVLVTPLGALSIIVSAVLAHF LNEKLQR
Sbjct: 63 YGYLLEPLWWVGMVTMLVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQR 122
Query: 116 MGVLGCVLCIVGSTVIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCA 175
+GVLGCVLCIVGSTVIILHAP+E TPSSV++IWHLA QP FLCY A+ VSL LM +CA
Sbjct: 123 VGVLGCVLCIVGSTVIILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCA 182
Query: 176 PRYGQTNIAVYIGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICII 235
PRYGQ NI VY+GICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFA +S CI
Sbjct: 183 PRYGQMNIMVYVGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIA 242
Query: 236 IQLIYLNKALDTFNTAVVSPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVL 295
+QL+YLNKALDTFN AVVSPIYYAMFT+LTILASAIMFKDWSGQS S IASEICGFLTVL
Sbjct: 243 VQLVYLNKALDTFNAAVVSPIYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVL 302
Query: 296 SGTVVLHSTREYDQTISPDLYTPLPP-IYWHIQGNGETVKQKEDDSLSADFITVVRQDYF 354
+GT+VLHSTRE DQT+S DLY PLPP IYWHIQGNG+ KQKEDDSL D ITV+RQDYF
Sbjct: 303 AGTLVLHSTREPDQTLSADLYAPLPPKIYWHIQGNGDIGKQKEDDSLPCDIITVMRQDYF 362
Query: 355 V 355
V
Sbjct: 363 V 363
>Os05g0513400 Protein of unknown function DUF803 family protein
Length = 354
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 249/346 (71%), Gaps = 3/346 (0%)
Query: 11 DLFAANLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXX-XXXXLEPLWWVGMI 69
+L N+KG +LA+ SS FIG SFI LEPLWWVGMI
Sbjct: 10 ELSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGMI 69
Query: 70 TMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGST 129
TM++GE+ANFVAY FAPAVLVTPLGALSIIVSAVLAHFILNE+L +GVLGCV+CI GS
Sbjct: 70 TMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSV 129
Query: 130 VIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGI 189
VI++HAP+E+ +SV +IW++A QPAFL YVA +VV +L+ H +P YGQ+N+ +Y I
Sbjct: 130 VIVIHAPQEQEITSVREIWNMAIQPAFLLYVASVIVVVFVLVFHFSPLYGQSNVLIYTAI 189
Query: 190 CSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIYLNKALDTFN 249
CS++GSL+VMS+KA+G ++KLT EG NQ Y +TW F + A C++ Q+ YLNKALDTFN
Sbjct: 190 CSLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTFN 249
Query: 250 TAVVSPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVVLHSTREYDQ 309
TA+VSPIYY MFT+LTILAS IMFKDWSGQS+ SI SEICG + VLSGT++LH T++Y++
Sbjct: 250 TAIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKDYER 309
Query: 310 T-ISPDLYTPLPPIYWHIQGNGETVKQKEDDSLSADFITVVRQDYF 354
S +Y PL P + NG+ +K EDD + + RQ+ +
Sbjct: 310 IPQSRSIYAPLSP-SLTARLNGDLLKHVEDDRNPDEEKALRRQEMY 354
>Os06g0715700 Protein of unknown function DUF803 family protein
Length = 344
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 238/331 (71%), Gaps = 3/331 (0%)
Query: 16 NLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMITMLIGE 75
N G LAVASSAFIG SFI LEPLWW GM+TML+GE
Sbjct: 6 NTVGLSLAVASSAFIGASFILKKIGLIRAGKGGVRAGGGGYTYLLEPLWWAGMMTMLLGE 65
Query: 76 IANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGSTVIILHA 135
IANFVAY FAPAVLVTPLGALSIIVS+ LAHF+L E+L+++GVLGCV CIVGS ++++HA
Sbjct: 66 IANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLGCVSCIVGSVIVVIHA 125
Query: 136 PEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGICSVIGS 195
P+E P+SVE+IW+LA QP FL Y LVV L+ PRYGQTNI +Y+GICS +GS
Sbjct: 126 PQEHMPNSVEEIWNLAIQPGFLTYAVATLVVVAALVLFFEPRYGQTNIMIYLGICSSMGS 185
Query: 196 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIYLNKALDTFNTAVVSP 255
LTV+SIKA+G+AIKLT++G+NQ Y TWLF ++ IC++ Q+ YLNKALDTF+ AVVSP
Sbjct: 186 LTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAVVSP 245
Query: 256 IYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVVLHSTREYDQTISPDL 315
IYY MFT+LTI+AS IMFKDW+GQS SSIASE CG +T+L+GT++LH+ +E + S L
Sbjct: 246 IYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKEEETGSSAAL 305
Query: 316 YTPLP--PIYWHIQ-GNGETVKQKEDDSLSA 343
PL I W I G+ +K +D +A
Sbjct: 306 PWPLDRGSISWCISLGSDNLLKNVNEDYFAA 336
>Os01g0882300 Protein of unknown function DUF803 family protein
Length = 360
Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 219/307 (71%)
Query: 14 AANLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMITMLI 73
A N+KG +LA++SS FIG SFI EPLWW GMITM++
Sbjct: 24 ADNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYLYEPLWWAGMITMIV 83
Query: 74 GEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGSTVIIL 133
GE+ANF AY FAPA+LVTPLGALSII+SAVLA +L EKL G+LGCVLC+VGST I+L
Sbjct: 84 GEVANFAAYAFAPAILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGSTTIVL 143
Query: 134 HAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGICSVI 193
HAP+E SV ++W LAT+PAFL Y L + +L+ P+YGQT+I VYIG+CS++
Sbjct: 144 HAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGVCSLV 203
Query: 194 GSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIYLNKALDTFNTAVV 253
GSL+VMS+KA+GIA+KLT G+NQ Y QTW+F V CI+ Q+ YLNKALDTFNTAVV
Sbjct: 204 GSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFNTAVV 263
Query: 254 SPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVVLHSTREYDQTISP 313
SPIYY MFTSLTILAS IMFKDW Q+ + I +E+CGF+T+LSGT +LH T++ + P
Sbjct: 264 SPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVDGLPP 323
Query: 314 DLYTPLP 320
L +P
Sbjct: 324 TLPIRIP 330
>Os05g0424800 Similar to AER274Wp
Length = 358
Score = 351 bits (901), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/333 (54%), Positives = 226/333 (67%), Gaps = 13/333 (3%)
Query: 14 AANLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMITMLI 73
A N+KG LLA++SS FIG SFI LEPLWW GM M++
Sbjct: 15 ADNVKGLLLALSSSLFIGASFIVKKKGLKKAGASGVRAGVGGYSYLLEPLWWAGMTAMIV 74
Query: 74 GEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGSTVIIL 133
GEIANF AY FAPA+LVTPLGALSII+SAVLAH IL EKL G+LGC+LC+VGST I+L
Sbjct: 75 GEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGSTSIVL 134
Query: 134 HAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGICSVI 193
HAP E SV ++W LAT+PAFL Y A L + +L+ H P+YGQT+I VYIG+CS++
Sbjct: 135 HAPPERQIESVAEVWDLATEPAFLLYAAIVLAAAFVLIFHFVPQYGQTHIMVYIGVCSLV 194
Query: 194 GSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIYLNKALDTFNTAVV 253
GSL+VMS+KA+GIA+KLT G+NQ Y Q W+F CI+ Q+ YLNKALDTFNTAVV
Sbjct: 195 GSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLNKALDTFNTAVV 254
Query: 254 SPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVVLHSTREYDQTISP 313
SPIYY MFTSLTILAS IMFKDW Q + I +E+CGF+T+LSGT +LH T++ + P
Sbjct: 255 SPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLHKTKDMVDGLPP 314
Query: 314 DLYTPLPPIYWHIQGNGETVKQKEDDSLSADFI 346
+L LP K E+D +A+ I
Sbjct: 315 NLPIRLP-------------KHAEEDGYAAEGI 334
>AK073285
Length = 361
Score = 332 bits (850), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/260 (61%), Positives = 200/260 (76%)
Query: 61 EPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLG 120
EPLWWVGMITM++GE+ANF AY FAPA+LVTPLGALSII+SA+LAHF+L +KL G+LG
Sbjct: 72 EPLWWVGMITMVVGEVANFAAYAFAPAILVTPLGALSIIISAILAHFMLRKKLHIFGILG 131
Query: 121 CVLCIVGSTVIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQ 180
C+LC+VGST I+LHAP E SV ++W LAT+PAF+ YV+ L + IL+ P YGQ
Sbjct: 132 CILCVVGSTTIVLHAPAEREIESVTEVWDLATEPAFMFYVSVVLAMVAILVCRFVPLYGQ 191
Query: 181 TNIAVYIGICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIY 240
T++ VYIG+CS++GS++VMS+KA+GIA+KLT G NQ Y QTW F V CI+ Q+ Y
Sbjct: 192 THVMVYIGVCSLVGSISVMSVKALGIALKLTFCGTNQLIYPQTWAFTLVVLSCIVTQMNY 251
Query: 241 LNKALDTFNTAVVSPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVV 300
LNKALDTFNTAVVSPIYY MFTSLTILAS IMFKDW Q+ + I +E CGF+T+LSGT +
Sbjct: 252 LNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEACGFVTILSGTFL 311
Query: 301 LHSTREYDQTISPDLYTPLP 320
LH T++ +S LP
Sbjct: 312 LHKTKDMADGLSTSSSFRLP 331
>Os04g0373000 Protein of unknown function DUF803 family protein
Length = 317
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 213/302 (70%), Gaps = 2/302 (0%)
Query: 16 NLKGSLLAVASSAFIGVSFIXXXXXXXXXXXXXXXXXXXXXXXXLEPLWWVGMITMLIGE 75
N++G LA +SSAFIG SF+ EPLWW+GM M++GE
Sbjct: 7 NVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMTAMILGE 66
Query: 76 IANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGSTVIILHA 135
+ANF AY FAPA+LVTPLGALSII SAVLAHFIL E+L G++GC+LC+VGS I+LHA
Sbjct: 67 VANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVGIVLHA 126
Query: 136 PEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGICSVIGS 195
P+E+ SV +IWHLATQP F+ Y A+VV+LIL+ R Q + YI ICS++GS
Sbjct: 127 PKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAICSLMGS 186
Query: 196 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIYLNKALDTFNTAVVSP 255
LTV+S+KAV IA+KL+ G+NQ Y TW F V IC ++QL YLNKALD+FNTAVVSP
Sbjct: 187 LTVISVKAVAIALKLSFNGVNQFIYVPTWFFIVVVVICCLVQLNYLNKALDSFNTAVVSP 246
Query: 256 IYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVVLHSTREY--DQTISP 313
+YY MFT LTI+A+ IM+KDW+ Q+ + IA+E+CGF+T+++GT +LH TR+ +Q+ S
Sbjct: 247 VYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGNEQSESS 306
Query: 314 DL 315
L
Sbjct: 307 SL 308
>Os02g0498300 Protein of unknown function DUF803 family protein
Length = 268
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/239 (58%), Positives = 182/239 (76%)
Query: 68 MITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVG 127
MITM++GE+ANF AY FAPAVLVTPLGALSII SAVLAHF+L EKL GV+GC+LC+VG
Sbjct: 1 MITMILGEVANFAAYAFAPAVLVTPLGALSIIFSAVLAHFVLKEKLHMFGVVGCILCVVG 60
Query: 128 STVIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYI 187
S I+LHAP+E S+++IWHLAT+P F+ Y A+V L L+ A R G + VYI
Sbjct: 61 SVGIVLHAPKEREIDSIDEIWHLATEPGFIVYSCVAVVSVLFLIFWVAERSGHRKMLVYI 120
Query: 188 GICSVIGSLTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIYLNKALDT 247
ICS +GSLTV+S+KAV IA+KL+ G NQ Y QTW F V +C ++QL YLNKALD+
Sbjct: 121 AICSTMGSLTVISVKAVAIALKLSFGGSNQFIYIQTWFFIVVVIVCCLVQLNYLNKALDS 180
Query: 248 FNTAVVSPIYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVVLHSTRE 306
FNTAVVSP+YY MFT LTI A+ IM+KD ++ + IA+++CGF+T+++GT +LH TR+
Sbjct: 181 FNTAVVSPVYYVMFTILTIFANMIMYKDSFSRNATQIATQLCGFVTIVAGTFLLHKTRD 239
>Os11g0197400 Protein of unknown function DUF803 family protein
Length = 139
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 102/129 (79%)
Query: 70 TMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGST 129
T+++GEIANF AY FAPA+LVTPLGALSII+SA LAH IL EKL G+LGCVLC+VGS
Sbjct: 1 TVIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHAILQEKLHTFGILGCVLCVVGSI 60
Query: 130 VIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGI 189
I+LHAP+E SV ++W LAT+P FLCY A + +L+L+ P++GQTNI VYIG+
Sbjct: 61 TIVLHAPQERNIDSVREVWDLATEPGFLCYAAIVVAAALVLIYFVVPQHGQTNIMVYIGV 120
Query: 190 CSVIGSLTV 198
CS++GSLTV
Sbjct: 121 CSLLGSLTV 129
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,117,086
Number of extensions: 352221
Number of successful extensions: 1144
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1134
Number of HSP's successfully gapped: 10
Length of query: 355
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 253
Effective length of database: 11,709,973
Effective search space: 2962623169
Effective search space used: 2962623169
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)