Os11g0197400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF803 family protein.
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Os11g0197400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF803 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.24 | 0.326 | 10.8 | -1.16 | 0.76 | -1.06 | 0.81 | 3.28 | -0.0185 | 8.55 | 25.6 | 3688 | -- | -- |
| 54.77 | 0.345 | 10.9 | -1.51 | 0.861 | -1.03 | 0.641 | -- | -0.0487 | 8.5 | 21.3 | 9769 | -- | -- |
| 50.32 | 0.33 | 10.8 | -1.16 | 0.765 | -1.07 | -- | 3.17 | -0.0207 | 8.48 | 25.6 | 3684 | -- | -- |
| 55.65 | 0.347 | 10.9 | -1.53 | 0.847 | -1.01 | -- | -- | -0.0857 | 8.65 | 21.3 | 10410 | -- | -- |
| 82.06 | 0.422 | 10.9 | -1.11 | -- | -1.15 | -- | 3.17 | -0.025 | -- | 25.67 | 3653 | -- | -- |
| 74.53 | 0.405 | 11 | -2.36 | 0.868 | -- | 0.634 | -- | -0.454 | 8.89 | -- | -- | -- | -- |
| 75.89 | 0.408 | 11 | -2.34 | 0.867 | -- | -- | -- | -0.454 | 8.87 | -- | -- | -- | -- |
| 96.36 | 0.457 | 10.9 | -1.59 | -- | -1 | -- | -- | -0.0642 | -- | 21.4 | 9611 | -- | -- |
| 70.57 | 0.391 | 10.8 | -- | 0.919 | -1.81 | -- | -- | 0.344 | 8.51 | 18.7 | 47520 | -- | -- |
| 118.73 | 0.509 | 11 | -2.34 | -- | -- | -- | -- | -0.448 | -- | -- | -- | -- | -- |
| 220.14 | 0.694 | 10.9 | -- | 0.863 | -- | -- | -- | -0.193 | 9.07 | -- | -- | -- | -- |
| 109.61 | 0.488 | 10.8 | -- | -- | -1.94 | -- | -- | 0.29 | -- | 18.66 | 47520 | -- | -- |
| 263.08 | 0.757 | 10.9 | -- | -- | -- | -- | -- | -0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.59 | radiation | 10 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 17 | 44.95 | radiation | 40 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 18 | 45.14 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 37 | 45.49 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 52 | 45.53 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 81 | 45.58 | radiation | 40 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 82 | 45.58 | radiation | 40 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 84 | 45.59 | radiation | 40 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 86 | 45.59 | radiation | 40 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 91 | 45.61 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 93 | 45.62 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 105 | 45.64 | radiation | 20 | 43200 | < th | dose independent | sin | 10 | NA |
| 141 | 45.67 | radiation | 10 | 43200 | < th | dose independent | sin | 7 | NA |
| 287 | 46.04 | radiation | 40 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 327 | 46.13 | radiation | 40 | 43200 | > th | dose dependent | rect. | 14 | 21 |
| 381 | 46.29 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 399 | 46.37 | radiation | 40 | 43200 | > th | dose dependent | sin | 10 | NA |
| 487 | 46.61 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 489 | 46.61 | radiation | 10 | 43200 | > th | dose dependent | sin | 10 | NA |
| 762 | 46.91 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 21 |
| 764 | 46.91 | radiation | 40 | 43200 | > th | dose dependent | no | NA | NA |
| 903 | 46.92 | radiation | 40 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 911 | 46.94 | radiation | 20 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 970 | 46.96 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |