Os05g0513400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF803 family protein.
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Os05g0513400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF803 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.99 | 0.282 | 9.79 | -0.801 | 0.0353 | 0.349 | -0.706 | -1.04 | -0.289 | 6.86 | 20.5 | 275 | -- | -- |
| 37.77 | 0.286 | 9.75 | -0.673 | 0.0365 | 0.606 | -0.158 | -- | -0.227 | 6.49 | 19.02 | 304 | -- | -- |
| 36.95 | 0.283 | 9.78 | -0.783 | 0.0671 | 0.375 | -- | -0.879 | -0.285 | 3.02 | 20.55 | 234 | -- | -- |
| 37.54 | 0.285 | 9.76 | -0.724 | 0.0832 | 0.746 | -- | -- | -0.248 | 3.47 | 18.96 | 261 | -- | -- |
| 37.19 | 0.284 | 9.78 | -0.78 | -- | 0.364 | -- | -0.885 | -0.279 | -- | 20.6 | 235 | -- | -- |
| 46.52 | 0.32 | 9.74 | -0.473 | 0.00369 | -- | -0.501 | -- | -0.158 | 9.14 | -- | -- | -- | -- |
| 47.4 | 0.322 | 9.74 | -0.491 | 0.00681 | -- | -- | -- | -0.159 | 7.07 | -- | -- | -- | -- |
| 37.9 | 0.287 | 9.76 | -0.712 | -- | 0.721 | -- | -- | -0.245 | -- | 18.97 | 269 | -- | -- |
| 49.29 | 0.327 | 9.74 | -- | 0.0478 | 0.455 | -- | -- | -0.143 | 3.3 | 19 | 190 | -- | -- |
| 47.4 | 0.322 | 9.74 | -0.491 | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
| 53.75 | 0.343 | 9.73 | -- | 0.0083 | -- | -- | -- | -0.104 | 12.4 | -- | -- | -- | -- |
| 49.41 | 0.327 | 9.74 | -- | -- | 0.439 | -- | -- | -0.142 | -- | 18.97 | 190 | -- | -- |
| 53.76 | 0.342 | 9.73 | -- | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.37 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 2 | 33.90 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 12 | 33.96 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 13 | 33.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 14 | 33.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 16 | 34.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 17 | 34.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 23 | 34.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 40 | 34.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 56 | 34.26 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 59 | 34.27 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 60 | 34.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 62 | 34.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 67 | 34.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 79 | 34.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 88 | 34.33 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 107 | 34.36 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 122 | 34.39 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 15 |
| 123 | 34.39 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 22 |
| 124 | 34.39 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 125 | 34.39 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 131 | 34.40 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 141 | 34.41 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 151 | 34.42 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 167 | 34.44 | temperature | 20.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 169 | 34.44 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 173 | 34.44 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 178 | 34.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 203 | 34.46 | temperature | 20.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 204 | 34.46 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 205 | 34.46 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 208 | 34.46 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 233 | 34.48 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 237 | 34.48 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 275 | 34.50 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 9 |
| 292 | 34.51 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 319 | 34.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 322 | 34.52 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 333 | 34.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 346 | 34.54 | humidity | 90.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 349 | 34.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 352 | 34.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 355 | 34.54 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 449 | 34.59 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 11 |
| 485 | 34.61 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 614 | 34.66 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 721 | 34.70 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 22 |
| 752 | 34.71 | temperature | 25.0 | 43200 | < th | dose dependent | no | NA | NA |
| 753 | 34.71 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 769 | 34.72 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 817 | 34.73 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 834 | 34.73 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 853 | 34.74 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 22 |
| 858 | 34.74 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 881 | 34.74 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 883 | 34.75 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 919 | 34.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 946 | 34.76 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 981 | 34.77 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 23 |