BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0513400 Os05g0513400|AK069309
(354 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369 429 e-120
AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344 425 e-119
AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387 407 e-114
AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327 404 e-113
AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329 401 e-112
AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337 362 e-100
AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336 355 2e-98
AT3G26670.1 | chr3:9798236-9800562 REVERSE LENGTH=442 55 7e-08
>AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369
Length = 368
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/345 (62%), Positives = 257/345 (74%), Gaps = 15/345 (4%)
Query: 11 LSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGMIT 70
+S+DN+KG+VLAL SS FIGASFI+KKKGL+RA ASG+RAG GGYSYLLEPLWWVGMIT
Sbjct: 15 MSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAG-ASGLRAGSGGYSYLLEPLWWVGMIT 73
Query: 71 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 130
MIVGE+ANF AYAFAPA+LVTPLGALSII+SA LAH IL+E+LH G+LGCV+C+ GS+
Sbjct: 74 MIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSIT 133
Query: 131 IVIHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXXXXXXXXXXXYGQSNVLIYTAIC 190
IV+HAPQEQEI SV ++WN+A +PA YGQS+V++Y +C
Sbjct: 134 IVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVC 193
Query: 191 SLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTFNT 250
SL+GSLSVMSVKALG +LKLTF G NQL+YP+TW F LIV TCV+TQMNYLNKALDTFNT
Sbjct: 194 SLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNT 253
Query: 251 AIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKDYERI 310
A+VSPIYYVMFT+LTILASVIMFKDW Q I +E+CG + +LSGT LLH TKD +
Sbjct: 254 AVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKD--MV 311
Query: 311 PQSRSIYAPLSPSLTARLNGDLLKHVEDDRNPDEEK---ALRRQE 352
S S+ L L K +ED ++E LRR E
Sbjct: 312 DGSSSL---------GNLALRLPKQLEDSNGFEQEGIPLTLRRHE 347
>AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344
Length = 343
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/344 (61%), Positives = 257/344 (74%), Gaps = 18/344 (5%)
Query: 9 QELSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGM 68
+ +S+DN+KG+VLAL SS FIGASFI+KKKGL++AA ++G RAGVGGYSYL EPLWW+GM
Sbjct: 13 KGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAA-STGTRAGVGGYSYLYEPLWWIGM 71
Query: 69 ITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGS 128
TM++GE+ANF AYAFAPA+LVTPLGA+SII+SAVLAH IL E+LH G+LGC +C+ GS
Sbjct: 72 TTMLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGS 131
Query: 129 VVIVIHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXXXXXXXXXXXYGQSNVLIYTA 188
IV+HAPQE+EI SV E+WN+A +PA YGQ+NV++Y
Sbjct: 132 TTIVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIG 191
Query: 189 ICSLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTF 248
ICSL+GSLSVMSVKALG +LKLTF GTNQL YP+TW F L+V TCV+TQ+NYLNKALDTF
Sbjct: 192 ICSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTF 251
Query: 249 NTAIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKDYE 308
NTAIVSPIYYVMFT+LTILASVIMFKDW Q+ I +EICG + +LSGT LLH TKD
Sbjct: 252 NTAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKD-- 309
Query: 309 RIPQSRSIYAPLSPSLTARLNGDLLKHVEDDRNPDEEKALRRQE 352
+ + S+ PL S KH+ N +E LRRQE
Sbjct: 310 -MVEGSSVILPLRIS----------KHI----NEEEGIPLRRQE 338
>AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387
Length = 386
Score = 407 bits (1045), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/345 (61%), Positives = 252/345 (73%), Gaps = 8/345 (2%)
Query: 11 LSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGMIT 70
+S+DNVKG+VLAL SS FIGASFI+KKK + A ASG+RAG GGYSYLLEPLWW+GMIT
Sbjct: 15 MSSDNVKGLVLALSSSIFIGASFIVKKK-GLKKAGASGLRAGSGGYSYLLEPLWWIGMIT 73
Query: 71 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 130
MIVGE+ANF AYAFAPA+LVTPLGALSII+SA LAH IL E+LH G+LGC +CI GSV
Sbjct: 74 MIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVT 133
Query: 131 IVIHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXXXXXXXXXXXYGQSNVLIYTAIC 190
IV+HAPQEQ+I SV E+WN+A +PA YGQS+V++Y +C
Sbjct: 134 IVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVC 193
Query: 191 SLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTFNT 250
SL+GSLSVMSVKALG +LKLTF GTNQL YP+TW F +IV CV+TQMNYLNKALDTFNT
Sbjct: 194 SLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNT 253
Query: 251 AIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKDYERI 310
A+VSPIYYVMFT+LTILASVIMFKDW QS I +E+CG + +LSGT LLH T D
Sbjct: 254 AVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTDMVDG 313
Query: 311 PQSRSIYAPLSPSLTARLNGDLLKHVEDDRNPDEEK---ALRRQE 352
++ + L R+ KH ED ++ +LRRQE
Sbjct: 314 ESKGNLSSEEDSHLLLRIP----KHSEDSNGFVQDGIILSLRRQE 354
>AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327
Length = 326
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/302 (64%), Positives = 236/302 (78%), Gaps = 1/302 (0%)
Query: 13 TDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGMITMI 72
+DN G+VLA+ SS FIG+SFI+KKKGL+RAA A+G RAG GGY+YLLEPLWWVG++TM
Sbjct: 3 SDNEMGLVLAVSSSVFIGSSFILKKKGLKRAA-ANGTRAGFGGYTYLLEPLWWVGLVTMT 61
Query: 73 VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVVIV 132
GE+ANFVAY +APAVLVTPLGALSII+SAVLAHF+L+E+L +GV GCV CI GSV+IV
Sbjct: 62 FGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMIV 121
Query: 133 IHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXXXXXXXXXXXYGQSNVLIYTAICSL 192
IHAPQEQ SV EIW +A+QPA GQ+N+L+Y ICSL
Sbjct: 122 IHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICSL 181
Query: 193 MGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTFNTAI 252
MGSL+VMS+KA+G ++KLTFEG NQ+ YPETWFF ++ A CV+ QM YLNKALDTFN AI
Sbjct: 182 MGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAAI 241
Query: 253 VSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKDYERIPQ 312
VSPIYYVMFTTLTI+AS IMFKDW+GQ+ SI SEICG I VL+GT++LH T++ E+
Sbjct: 242 VSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQASP 301
Query: 313 SR 314
R
Sbjct: 302 RR 303
>AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329
Length = 328
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/299 (64%), Positives = 234/299 (78%), Gaps = 1/299 (0%)
Query: 11 LSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGMIT 70
+ TDN KG++LA+ SS FIG+SFI+KKKGL+RA A G RAG GGY+YLLEPLWW GM+T
Sbjct: 1 METDNGKGLILAVASSVFIGSSFILKKKGLKRAG-AIGTRAGYGGYTYLLEPLWWAGMVT 59
Query: 71 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 130
MIVGE ANFVAY +APAVLVTPLGALSII+SAVLAHF+L E+L +GVLGCV CI GSVV
Sbjct: 60 MIVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVV 119
Query: 131 IVIHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXXXXXXXXXXXYGQSNVLIYTAIC 190
IVIHAP+EQ SV EIWN+A QPA GQ+N+L+Y IC
Sbjct: 120 IVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGIC 179
Query: 191 SLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTFNT 250
SLMG+L+VMS+KA+G ++KLT EG +Q+ YP+TW FV++ TCV+TQ+ YLNKALDTFN
Sbjct: 180 SLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNA 239
Query: 251 AIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKDYER 309
AIVSP+YYVMFTTLTI+AS IMFKDWSGQ S+ SE+CG I VL+GT++LH T++ E+
Sbjct: 240 AIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQ 298
>AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337
Length = 336
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/298 (59%), Positives = 224/298 (75%), Gaps = 1/298 (0%)
Query: 9 QELSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGM 68
+E+S DN+ G++LA+ SS FIG+SFIIKKKGL++A V SG RAG GGY YL EP WW GM
Sbjct: 2 EEMSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGV-SGARAGEGGYGYLYEPWWWAGM 60
Query: 69 ITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGS 128
ITMIVGE+ANF AYAFAPA+LVTPLGALSII SAVLAHFIL E+LH G+LGCV+C+ GS
Sbjct: 61 ITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGS 120
Query: 129 VVIVIHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXXXXXXXXXXXYGQSNVLIYTA 188
IV+HAP EQ I SV+++W++A +P YG++++++Y
Sbjct: 121 TTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVG 180
Query: 189 ICSLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTF 248
ICSLMGSL+VMSVKA+ ++KLTF G NQ Y W F+++V C + Q+NYLNKALD F
Sbjct: 181 ICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNF 240
Query: 249 NTAIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKD 306
NTA++SP+YYVMFTT TILAS+IMFKDW+ QS I +E+CG + +LSGT LLH TKD
Sbjct: 241 NTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKD 298
>AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336
Length = 335
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/312 (59%), Positives = 231/312 (74%), Gaps = 2/312 (0%)
Query: 9 QELSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGM 68
++S DN+ G++LA+ SS FIG+SFIIKKK + A ASG+RAG GGY YL EP WW GM
Sbjct: 2 DQMSPDNINGVILAVSSSIFIGSSFIIKKK-GLKKAGASGVRAGEGGYGYLKEPWWWAGM 60
Query: 69 ITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGS 128
ITMIVGEVANF AYAFAPA+LVTPLGALSII SAVLAHFIL E+LH G+LGC++C+ GS
Sbjct: 61 ITMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGS 120
Query: 129 VVIVIHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXXXXXXXXXXXYGQSNVLIYTA 188
IV+HAP EQ+I SV++IW +AI+P YG++++++Y
Sbjct: 121 TTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVG 180
Query: 189 ICSLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTF 248
ICSLMGSL+VMSVKA+ ++KLTF GTNQ Y TW F+L+VATC + Q+NYLNKALDTF
Sbjct: 181 ICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTF 240
Query: 249 NTAIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKDYE 308
NTA++SP+YYVMFTT TI+AS+IMFKDW+ QS I +E+CG + +LSGT LLH TKD
Sbjct: 241 NTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMG 300
Query: 309 RIPQSR-SIYAP 319
R SI P
Sbjct: 301 NSASGRGSISMP 312
>AT3G26670.1 | chr3:9798236-9800562 REVERSE LENGTH=442
Length = 441
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 27/271 (9%)
Query: 54 GGYSYLLEPL-----WWVGMITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFI 108
GG L+P+ W VG++ ++G NF+++ +A L+ LG++ + + A+ +
Sbjct: 40 GGGKMPLKPIIHNQTWRVGILVFLLGNCLNFISFGYAAQSLLAALGSIQFVSNIAFAYVV 99
Query: 109 LNERLHALGVLGCVMCIAGSVVIVIHAPQEQEITSVREIWNMAIQPAXXXXXXXXXXXXX 168
LN+ + ++ + G+V +V + + + ++ +
Sbjct: 100 LNKMVTVKVLVATAFIVLGNVFLVAFGNHQSPVFTPEQL----AEKYSNVTFLVYCGILI 155
Query: 169 XXXXXXXXXYGQSNVLI------------------YTAICSLMGSLSVMSVKALGTSLKL 210
Y + VLI Y + +GS SV+ K+L L+L
Sbjct: 156 LIVAVHHFLYRKGEVLISTPGQEISSYWKMLLPFSYAVVSGAIGSCSVLFAKSLSNLLRL 215
Query: 211 TFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTFNTAIVSPIYYVMFTTLTILASV 270
+ QL T+ +L+ + M LN+ L ++ ++ P++ + +T +I
Sbjct: 216 AMSSSYQLHSWFTYSMLLLFLSTAGFWMTRLNEGLSLYDAILIVPMFQIAWTFFSICTGC 275
Query: 271 IMFKDWSGQSLGSITSEICGLIVVLSGTILL 301
I F+++ T I G++ V G LL
Sbjct: 276 IYFQEFQVFDALRTTMFILGMMCVFIGISLL 306
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,345,446
Number of extensions: 232889
Number of successful extensions: 626
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 609
Number of HSP's successfully gapped: 8
Length of query: 354
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 254
Effective length of database: 8,364,969
Effective search space: 2124702126
Effective search space used: 2124702126
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)