Os06g0715700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF803 family protein.
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Os06g0715700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF803 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.53 | 0.635 | 7.08 | 0.0392 | 0.867 | 19.5 | 1.45 | 45.6 | 0.216 | 23.8 | 14.98 | 4907 | -- | -- |
| 201.23 | 0.666 | 6.32 | -1.18 | 0.924 | -2.16 | 1.06 | -- | 0.314 | 23.7 | 15.3 | 1509 | -- | -- |
| 186.77 | 0.637 | 7.14 | 0.245 | 0.879 | 19.7 | -- | 45.4 | 0.233 | 23.6 | 15 | 6696 | -- | -- |
| 192.54 | 0.646 | 6.34 | -1.39 | 0.88 | -2.45 | -- | -- | 0.285 | 23.7 | 14.9 | 1980 | -- | -- |
| 236.67 | 0.717 | 7.12 | 0.261 | -- | 19.8 | -- | 45.8 | 0.249 | -- | 15.01 | 6650 | -- | -- |
| 209.93 | 0.679 | 6.31 | -1.09 | 0.888 | -- | 1.32 | -- | 0.337 | 23.8 | -- | -- | -- | -- |
| 217.39 | 0.69 | 6.32 | -1.14 | 0.884 | -- | -- | -- | 0.332 | 23.6 | -- | -- | -- | -- |
| 238.25 | 0.719 | 6.35 | -1.53 | -- | -2.66 | -- | -- | 0.236 | -- | 14.6 | 2136 | -- | -- |
| 239.78 | 0.721 | 6.3 | -- | 0.856 | -1.72 | -- | -- | 0.435 | 23.5 | 15.3 | 428 | -- | -- |
| 266.49 | 0.763 | 6.3 | -1.12 | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
| 251.87 | 0.742 | 6.29 | -- | 0.871 | -- | -- | -- | 0.459 | 23.5 | -- | -- | -- | -- |
| 284.86 | 0.786 | 6.27 | -- | -- | -1.64 | -- | -- | 0.439 | -- | 15.7 | 510 | -- | -- |
| 299.52 | 0.808 | 6.27 | -- | -- | -- | -- | -- | 0.466 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.03 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 4 | 165.46 | humidity | 90 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 6 | 165.57 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 11 | 165.83 | humidity | 80 | 43200 | > th | dose dependent | sin | 9 | NA |
| 23 | 166.28 | humidity | 80 | 43200 | > th | dose dependent | rect. | 22 | 13 |
| 30 | 166.44 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 32 | 166.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 46 | 166.96 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 54 | 167.27 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 58 | 167.44 | humidity | 70 | 43200 | > th | dose dependent | rect. | 23 | 17 |
| 68 | 167.57 | humidity | 70 | 43200 | > th | dose dependent | rect. | 22 | 19 |
| 73 | 167.65 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 74 | 167.68 | humidity | 80 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 76 | 167.72 | humidity | 70 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 96 | 167.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 100 | 168.11 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 19 |
| 104 | 168.14 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 199 | 169.73 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 201 | 169.80 | humidity | 80 | 43200 | < th | dose independent | rect. | 24 | 18 |
| 226 | 170.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 227 | 170.11 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 232 | 170.19 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 248 | 170.42 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 272 | 171.01 | temperature | 15 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 274 | 171.02 | temperature | 15 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 278 | 171.06 | temperature | 15 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 292 | 171.12 | humidity | 80 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 294 | 171.13 | temperature | 15 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 361 | 171.50 | temperature | 15 | 43200 | < th | dose dependent | rect. | 7 | 14 |
| 458 | 172.03 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 17 |
| 464 | 172.07 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 476 | 172.15 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 479 | 172.19 | temperature | 15 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 508 | 172.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 523 | 172.47 | temperature | 15 | 43200 | < th | dose dependent | sin | 22 | NA |
| 526 | 172.50 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 532 | 172.54 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 558 | 172.69 | temperature | 15 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 574 | 172.86 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 588 | 172.97 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 18 |
| 594 | 173.00 | humidity | 70 | 43200 | > th | dose dependent | no | NA | NA |
| 623 | 173.23 | temperature | 15 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 641 | 173.31 | temperature | 15 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 658 | 173.44 | temperature | 15 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 681 | 173.54 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 700 | 173.64 | humidity | 80 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 729 | 173.80 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 762 | 173.95 | humidity | 70 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 769 | 173.98 | humidity | 90 | 43200 | < th | dose independent | sin | 11 | NA |
| 781 | 174.03 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 789 | 174.10 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 795 | 174.12 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 813 | 174.19 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 846 | 174.38 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 931 | 174.96 | temperature | 15 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 952 | 175.06 | temperature | 15 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 968 | 175.13 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 981 | 175.18 | temperature | 15 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 983 | 175.19 | humidity | 80 | 43200 | > th | dose independent | sin | 3 | NA |