BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0715700 Os06g0715700|AK121440
(344 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329 383 e-107
AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327 375 e-104
AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344 342 2e-94
AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369 333 6e-92
AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387 322 3e-88
AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337 312 2e-85
AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336 307 4e-84
>AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329
Length = 328
Score = 383 bits (983), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/338 (57%), Positives = 238/338 (70%), Gaps = 17/338 (5%)
Query: 4 SDNTVGLSLAVASSAFIGASFILKKIGLIXXXXXXXXXXXXXYTYLLEPLWWAGMMTMLL 63
+DN GL LAVASS FIG+SFILKK GL YTYLLEPLWWAGM+TM++
Sbjct: 3 TDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIV 62
Query: 64 GEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLXXXXXXXXXXXXXX 123
GE ANFVAY +APAVLVTPLGALSII+S+ LAHF+LKE+L+K+GVL
Sbjct: 63 GEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVIVI 122
Query: 124 HAPQEHMPNSVEEIWNLAIQPGFXXXXXXXXXXXXXXXXFFEPRYGQTNIMIYLGICSSM 183
HAP+E PNSVEEIWNLA QP F FEP GQTNI++Y+GICS M
Sbjct: 123 HAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLM 182
Query: 184 GSLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAVV 243
G+LTV+SIKAIG+AIKLT++G++Q+ YP TWLFV++A+ CVV+Q+ YLNKALDTF+ A+V
Sbjct: 183 GALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIV 242
Query: 244 SPIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKEEE--TGS 301
SP+YYVMFTTLTIVAS IMFKDW+GQ +S+ASE CG IT+LTGT++LH +EEE S
Sbjct: 243 SPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQAS 302
Query: 302 SAALPWPLDRGSISWCISLGSDNLLKNVNEDYFAALQS 339
S + W R K++NE++ +L S
Sbjct: 303 SEHVRWYDSR---------------KSMNEEHLVSLYS 325
>AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327
Length = 326
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/311 (60%), Positives = 221/311 (71%), Gaps = 1/311 (0%)
Query: 3 VSDNTVGLSLAVASSAFIGASFILKKIGLIXXXXXXXXXXXXXYTYLLEPLWWAGMMTML 62
VSDN +GL LAV+SS FIG+SFILKK GL YTYLLEPLWW G++TM
Sbjct: 2 VSDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMT 61
Query: 63 LGEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLXXXXXXXXXXXXX 122
GEIANFVAY +APAVLVTPLGALSII+S+ LAHF+L E+L K+GV
Sbjct: 62 FGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMIV 121
Query: 123 XHAPQEHMPNSVEEIWNLAIQPGFXXXXXXXXXXXXXXXXFFEPRYGQTNIMIYLGICSS 182
HAPQE PNSVEEIW LA+QP F + EP GQTNI++Y+GICS
Sbjct: 122 IHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICSL 181
Query: 183 MGSLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAV 242
MGSLTV+SIKA+G+AIKLT +G+NQ+ YP TW F ++A ICVV Q+ YLNKALDTF+ A+
Sbjct: 182 MGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAAI 241
Query: 243 VSPIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKEEETGSS 302
VSPIYYVMFTTLTIVAS IMFKDW GQ+ SIASE CG IT+LTGT++LH+ +EEE S
Sbjct: 242 VSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQASP 301
Query: 303 AALPWPLDRGS 313
+ W D G
Sbjct: 302 RRMRWQ-DSGK 311
>AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344
Length = 343
Score = 342 bits (876), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/308 (53%), Positives = 212/308 (68%)
Query: 4 SDNTVGLSLAVASSAFIGASFILKKIGLIXXXXXXXXXXXXXYTYLLEPLWWAGMMTMLL 63
SDN GL LA++SS FIGASFI+KK GL Y+YL EPLWW GM TMLL
Sbjct: 17 SDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMTTMLL 76
Query: 64 GEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLXXXXXXXXXXXXXX 123
GEIANF AY FAPA+LVTPLGA+SII+S+ LAH +L+E+L G+L
Sbjct: 77 GEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGSTTIVL 136
Query: 124 HAPQEHMPNSVEEIWNLAIQPGFXXXXXXXXXXXXXXXXFFEPRYGQTNIMIYLGICSSM 183
HAPQE +SV E+WNLA +P F F P+YGQTN+M+Y+GICS +
Sbjct: 137 HAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGICSLV 196
Query: 184 GSLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAVV 243
GSL+V+S+KA+G+A+KLT G NQ+ YP TW+F ++ + CVV+Q+NYLNKALDTF+ A+V
Sbjct: 197 GSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTAIV 256
Query: 244 SPIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKEEETGSSA 303
SPIYYVMFT+LTI+AS IMFKDW Q+ + I +E CG +TIL+GT +LH K+ GSS
Sbjct: 257 SPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKDMVEGSSV 316
Query: 304 ALPWPLDR 311
LP + +
Sbjct: 317 ILPLRISK 324
>AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369
Length = 368
Score = 333 bits (855), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 210/300 (70%)
Query: 4 SDNTVGLSLAVASSAFIGASFILKKIGLIXXXXXXXXXXXXXYTYLLEPLWWAGMMTMLL 63
SDN GL LA++SS FIGASFI+KK GL Y+YLLEPLWW GM+TM++
Sbjct: 17 SDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIV 76
Query: 64 GEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLXXXXXXXXXXXXXX 123
GEIANF AY FAPA+LVTPLGALSII+S+ LAH +L E+L G+L
Sbjct: 77 GEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSITIVL 136
Query: 124 HAPQEHMPNSVEEIWNLAIQPGFXXXXXXXXXXXXXXXXFFEPRYGQTNIMIYLGICSSM 183
HAPQE +SV ++WNLA +P F F P+YGQ+++M+Y+G+CS +
Sbjct: 137 HAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGVCSLV 196
Query: 184 GSLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAVV 243
GSL+V+S+KA+G+A+KLT GMNQ+ YP TW+F +I + CV++Q+NYLNKALDTF+ AVV
Sbjct: 197 GSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFNTAVV 256
Query: 244 SPIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKEEETGSSA 303
SPIYYVMFT+LTI+AS IMFKDW Q + I +E CG +TIL+GT +LH K+ GSS+
Sbjct: 257 SPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKDMVDGSSS 316
>AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387
Length = 386
Score = 322 bits (824), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/301 (53%), Positives = 207/301 (68%)
Query: 4 SDNTVGLSLAVASSAFIGASFILKKIGLIXXXXXXXXXXXXXYTYLLEPLWWAGMMTMLL 63
SDN GL LA++SS FIGASFI+KK GL Y+YLLEPLWW GM+TM++
Sbjct: 17 SDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMITMIV 76
Query: 64 GEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLXXXXXXXXXXXXXX 123
GEIANF AY FAPA+LVTPLGALSII+S+ LAH +L+E+L G+L
Sbjct: 77 GEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSVTIVL 136
Query: 124 HAPQEHMPNSVEEIWNLAIQPGFXXXXXXXXXXXXXXXXFFEPRYGQTNIMIYLGICSSM 183
HAPQE SV E+WNLA +P F F P YGQ+++M+Y+G+CS +
Sbjct: 137 HAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGVCSLI 196
Query: 184 GSLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAVV 243
GSL+V+S+KA+G+A+KLT G NQ+ YP TW+F +I + CV++Q+NYLNKALDTF+ AVV
Sbjct: 197 GSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFNTAVV 256
Query: 244 SPIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKEEETGSSA 303
SPIYYVMFT+LTI+AS IMFKDW QS + I +E CG +TIL+GT +LHT + G S
Sbjct: 257 SPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTDMVDGESK 316
Query: 304 A 304
Sbjct: 317 G 317
>AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337
Length = 336
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/311 (53%), Positives = 212/311 (68%), Gaps = 7/311 (2%)
Query: 5 DNTVGLSLAVASSAFIGASFILKKIGLIXXXXXXXXXXXXXYTYLLEPLWWAGMMTMLLG 64
DN G+ LAV+SS FIG+SFI+KK GL Y YL EP WWAGM+TM++G
Sbjct: 7 DNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGMITMIVG 66
Query: 65 EIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLXXXXXXXXXXXXXXH 124
EIANF AY FAPA+LVTPLGALSII S+ LAHF+L+E+L G+L H
Sbjct: 67 EIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGSTTIVLH 126
Query: 125 APQEHMPNSVEEIWNLAIQPGFXXXXXXXXXXXXXXXXFFEPRYGQTNIMIYLGICSSMG 184
AP E SV+++W+LA +PGF ++EPRYG+T++++Y+GICS MG
Sbjct: 127 APHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVGICSLMG 186
Query: 185 SLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAVVS 244
SLTV+S+KA+ +AIKLT GMNQ Y H W+F+I+ IC + QINYLNKALD F+ AV+S
Sbjct: 187 SLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNFNTAVIS 246
Query: 245 PIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKEEETGSSAA 304
P+YYVMFTT TI+AS IMFKDWA QS IA+E CG +TIL+GT +LH K ++ G+S +
Sbjct: 247 PVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLH--KTKDMGNSTS 304
Query: 305 LPWPLDRGSIS 315
L RGS S
Sbjct: 305 L-----RGSTS 310
>AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336
Length = 335
Score = 307 bits (787), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 191/270 (70%), Gaps = 7/270 (2%)
Query: 46 YTYLLEPLWWAGMMTMLLGEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEK 105
Y YL EP WWAGM+TM++GE+ANF AY FAPA+LVTPLGALSII S+ LAHF+LKE+L
Sbjct: 48 YGYLKEPWWWAGMITMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHM 107
Query: 106 LGVLXXXXXXXXXXXXXXHAPQEHMPNSVEEIWNLAIQPGFXXXXXXXXXXXXXXXXFFE 165
G+L HAP E SV++IW LAI+PGF ++E
Sbjct: 108 FGILGCILCVVGSTTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYE 167
Query: 166 PRYGQTNIMIYLGICSSMGSLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVV 225
PRYG+T++++Y+GICS MGSLTV+S+KA+ +AIKLT G NQ Y +TW+F+++ C +
Sbjct: 168 PRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCI 227
Query: 226 SQINYLNKALDTFDLAVVSPIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITIL 285
QINYLNKALDTF+ AV+SP+YYVMFTT TI+AS IMFKDWA QS IA+E CG +TIL
Sbjct: 228 LQINYLNKALDTFNTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTIL 287
Query: 286 TGTIMLHTAKEEETGSSAALPWPLDRGSIS 315
+GT +LH K ++ G+SA+ RGSIS
Sbjct: 288 SGTFLLH--KTKDMGNSAS-----GRGSIS 310
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,965,513
Number of extensions: 207823
Number of successful extensions: 618
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 600
Number of HSP's successfully gapped: 7
Length of query: 344
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 245
Effective length of database: 8,392,385
Effective search space: 2056134325
Effective search space used: 2056134325
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 112 (47.8 bits)