FiT-DB / Search/ Help/ Sample detail

Os01g0882300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF803 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.05 (0.0157) R2 : 0.676
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.27 (0.0412) R2dC : 0.674 R2C : 0.672
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0746 (0.0331) R2dN8 : 0.00466 R2N8 : 0.00273
σ : 0.296
deviance : 40.15
__
_____
C
peak time of C : 6.25
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.94 0.253 7.93 1.33 1.24 0.291 -0.606 -3.91 0.219 6.33 29.97 1406 -- --
31.17 0.26 8.03 0.55 1.27 -0.123 -0.548 -- 0.165 6.25 32.8 5939 -- --
29.29 0.252 7.94 1.38 1.22 0.244 -- -3.75 0.327 6.28 29.29 2318 -- --
31.27 0.26 8.04 0.48 1.24 -0.199 -- -- 0.15 6.34 32.1 2541 -- --
88.97 0.439 7.89 1.43 -- 1.07 -- -3.51 0.536 -- 28.3 629 -- --
32.12 0.266 8.04 0.531 1.26 -- -0.563 -- 0.131 6.29 -- -- -- --
32.9 0.269 8.04 0.524 1.26 -- -- -- 0.133 6.27 -- -- -- --
85 0.429 8 0.79 -- 0.845 -- -- 0.477 -- 25.4 462 -- --
36.72 0.282 8.04 -- 1.26 -0.323 -- -- 0.141 6.34 31.5 3949 -- --
115.08 0.501 8.06 0.558 -- -- -- -- 0.16 -- -- -- -- --
40.15 0.296 8.05 -- 1.27 -- -- -- 0.0746 6.25 -- -- -- --
94.59 0.453 8.03 -- -- 0.651 -- -- 0.301 -- 25.71 368 -- --
123.3 0.518 8.07 -- -- -- -- -- 0.0984 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.42 wind 1.0 30 < th dose dependent rect. 22 5
11 27.13 temperature 20.0 90 > th dose dependent rect. 22 5
12 27.22 temperature 20.0 270 > th dose dependent rect. 23 1
13 27.29 temperature 20.0 270 > th dose dependent rect. 22 3
14 27.35 wind 1.0 30 < th dose dependent rect. 11 16
20 27.52 temperature 20.0 10 > th dose dependent rect. 23 5
32 27.69 wind 1.0 30 < th dose independent rect. 22 5
36 27.70 wind 1.0 270 < th dose dependent rect. 22 1
52 27.81 radiation 20.0 10 < th dose dependent rect. 8 19
60 27.83 temperature 10.0 270 > th dose dependent rect. 21 13
70 27.88 radiation 1.0 720 < th dose dependent rect. 17 12
78 27.97 wind 1.0 270 < th dose independent rect. 22 1
81 27.99 radiation 10.0 30 < th dose independent rect. 8 19
96 28.08 radiation 40.0 90 < th dose dependent rect. 13 14
97 28.10 radiation 1.0 720 < th dose dependent rect. 17 4
142 28.29 radiation 1.0 720 > th dose independent rect. 15 2
152 28.31 temperature 25.0 720 > th dose dependent rect. 15 18
171 28.38 temperature 20.0 10 > th dose dependent rect. 1 2
174 28.40 temperature 20.0 720 > th dose dependent rect. 15 12
175 28.42 atmosphere 995.0 270 > th dose independent rect. 6 11
181 28.44 radiation 40.0 720 < th dose independent rect. 6 4
199 28.51 radiation 20.0 90 < th dose independent rect. 13 14
200 28.51 radiation 40.0 720 < th dose independent rect. 15 19
201 28.51 atmosphere 995.0 90 > th dose independent rect. 6 21
225 28.56 temperature 25.0 720 > th dose independent rect. 15 18
248 28.58 radiation 40.0 90 < th dose dependent rect. 15 12
250 28.59 radiation 1.0 720 < th dose independent rect. 16 13
255 28.60 temperature 30.0 720 < th dose independent rect. 6 4
257 28.60 temperature 25.0 720 > th dose independent rect. 15 10
282 28.65 radiation 1.0 720 < th dose independent rect. 16 6
302 28.68 temperature 25.0 720 > th dose dependent sin 12 NA
330 28.72 temperature 20.0 90 > th dose independent rect. 22 5
345 28.73 atmosphere 1015.0 90 < th dose dependent rect. 3 4
349 28.74 temperature 25.0 270 > th dose independent rect. 21 11
350 28.74 radiation 30.0 720 < th dose independent rect. 22 11
357 28.75 radiation 20.0 90 < th dose independent rect. 15 12
369 28.76 radiation 1.0 720 > th dose independent rect. 15 14
372 28.76 temperature 30.0 90 < th dose dependent rect. 3 4
388 28.77 atmosphere 1015.0 90 < th dose independent rect. 6 21
396 28.77 radiation 1.0 720 < th dose dependent rect. 3 19
404 28.79 wind 1.0 10 < th dose independent sin 17 NA
407 28.79 atmosphere 995.0 90 > th dose independent rect. 15 12
455 28.84 temperature 20.0 270 > th dose independent rect. 22 3
463 28.85 precipitation 0.1 720 < th dose independent rect. 21 6
464 28.85 temperature 30.0 720 < th dose independent rect. 21 13
467 28.85 temperature 20.0 90 > th dose independent rect. 6 21
470 28.85 precipitation 0.1 720 < th dose dependent rect. 21 6
477 28.86 temperature 30.0 1440 > th dose independent rect. 8 8
507 28.86 radiation 40.0 720 < th dose dependent rect. 6 3
515 28.87 temperature 30.0 1440 < th dose independent rect. 6 11
527 28.88 temperature 30.0 1440 < th dose independent rect. 8 9
537 28.88 radiation 40.0 720 < th dose dependent rect. 22 11
541 28.89 temperature 25.0 720 > th dose independent sin 14 NA
551 28.89 temperature 30.0 1440 < th dose independent rect. 21 20
563 28.90 temperature 30.0 1440 > th dose independent rect. 12 3
569 28.90 temperature 30.0 270 < th dose independent rect. 6 10
589 28.90 radiation 1.0 720 < th dose dependent rect. 10 12
628 28.92 temperature 30.0 1440 < th dose independent sin 0 NA
631 28.92 wind 5.0 90 < th dose independent rect. 3 3
653 28.92 temperature 30.0 1440 > th dose independent rect. 13 22
661 28.93 temperature 30.0 1440 > th dose independent sin 23 NA
680 28.93 temperature 30.0 1440 < th dose independent rect. 5 17
696 28.93 temperature 30.0 1440 < th dose independent rect. 12 23
717 28.94 humidity 50.0 270 > th dose independent rect. 17 13
720 28.94 temperature 30.0 1440 < th dose independent rect. 8 14
742 28.94 temperature 25.0 720 > th dose dependent rect. 16 2
757 28.95 wind 1.0 720 > th dose independent rect. 9 6
770 28.95 radiation 20.0 10 < th dose independent rect. 12 15
813 28.96 temperature 30.0 1440 < th dose independent no NA NA
815 28.96 temperature 10.0 720 > th dose independent rect. 21 6
816 28.96 temperature 30.0 720 < th dose independent rect. 21 6
817 28.96 humidity 50.0 720 > th dose independent rect. 21 6
820 28.96 atmosphere 995.0 720 > th dose independent rect. 21 6
821 28.96 radiation 1.0 720 < th dose independent rect. 21 6
830 28.96 temperature 10.0 720 > th dose independent rect. 3 18
850 28.96 temperature 30.0 1440 > th dose independent rect. 10 23
856 28.96 temperature 30.0 1440 < th dose independent rect. 8 23
865 28.96 radiation 1.0 720 < th dose dependent rect. 21 6
872 28.97 temperature 30.0 1440 > th dose independent no NA NA
987 28.97 temperature 30.0 1440 < th dose independent rect. 10 23
990 28.97 atmosphere 1015.0 270 < th dose dependent rect. 3 1
1000 28.98 humidity 90.0 43200 > th dose independent rect. 10 1