BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0882300 Os01g0882300|AK102845
(360 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344 481 e-136
AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369 464 e-131
AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387 445 e-125
AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337 355 3e-98
AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336 350 7e-97
AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329 340 5e-94
AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327 328 3e-90
>AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344
Length = 343
Score = 481 bits (1237), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/337 (71%), Positives = 267/337 (79%), Gaps = 6/337 (1%)
Query: 20 EGMSADNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLYEPLWWAGMI 79
+GMS+DNIKGLVLALSSS FIGASFIV LYEPLWW GM
Sbjct: 13 KGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKKAASTGTRAGVGGYSYLYEPLWWIGMT 72
Query: 80 TMIVGEVXXXXXXXXXXXILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGST 139
TM++GE+ ILVTPLGA+SIIISAVLA I+L+EKLHIFGILGC LCVVGST
Sbjct: 73 TMLLGEIANFAAYAFAPAILVTPLGAVSIIISAVLAHIILREKLHIFGILGCALCVVGST 132
Query: 140 TIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGV 199
TIVLHAPQEREIDSV EVW LATEPAF+FYA V+ A LI RF+PQYGQT++MVYIG+
Sbjct: 133 TIVLHAPQEREIDSVIEVWNLATEPAFMFYASLVIGAAVFLIIRFVPQYGQTNVMVYIGI 192
Query: 200 CSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFN 259
CSLVGSLSVMSVKALGIALKLTFSG NQL YPQTW+FT+VV+ C++TQ+NYLNKALDTFN
Sbjct: 193 CSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFN 252
Query: 260 TAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVD 319
TA+VSPIYY MFTSLTILASVIMFKDWDRQN TQIVTE+CGFVTILSGTFLLH+TKDMV+
Sbjct: 253 TAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKDMVE 312
Query: 320 GLPPTLPIRIPKHDEDGYAAEGIPLRSAAEGLPLRSP 356
G LP+RI KH + EGIPLR LRSP
Sbjct: 313 GSSVILPLRISKHINE---EEGIPLRRQES---LRSP 343
>AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369
Length = 368
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/342 (70%), Positives = 267/342 (78%), Gaps = 5/342 (1%)
Query: 20 EGMSADNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLYEPLWWAGMI 79
+GMS+DNIKGLVLALSSS FIGASFIV L EPLWW GMI
Sbjct: 13 KGMSSDNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMI 72
Query: 80 TMIVGEVXXXXXXXXXXXILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGST 139
TMIVGE+ ILVTPLGALSIIISA LA ++L EKLH FG+LGCVLCVVGS
Sbjct: 73 TMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVLCVVGSI 132
Query: 140 TIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGV 199
TIVLHAPQE+EIDSV +VW LATEPAFL YA V+ A +LI +F+PQYGQ+H+MVYIGV
Sbjct: 133 TIVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHVMVYIGV 192
Query: 200 CSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFN 259
CSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTW+FT++V+ C++TQMNYLNKALDTFN
Sbjct: 193 CSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCVITQMNYLNKALDTFN 252
Query: 260 TAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVD 319
TAVVSPIYY MFTSLTILASVIMFKDWDRQ+ TQIVTE+CGFVTILSGTFLLHKTKDMVD
Sbjct: 253 TAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTILSGTFLLHKTKDMVD 312
Query: 320 GLPP--TLPIRIPKH--DEDGYAAEGIPLRSAAEGLPLRSPR 357
G L +R+PK D +G+ EGIPL +SPR
Sbjct: 313 GSSSLGNLALRLPKQLEDSNGFEQEGIPLTLRRHECT-KSPR 353
>AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387
Length = 386
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/352 (67%), Positives = 264/352 (75%), Gaps = 12/352 (3%)
Query: 20 EGMSADNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLYEPLWWAGMI 79
+GMS+DN+KGLVLALSSS FIGASFIV L EPLWW GMI
Sbjct: 13 KGMSSDNVKGLVLALSSSIFIGASFIVKKKGLKKAGASGLRAGSGGYSYLLEPLWWIGMI 72
Query: 80 TMIVGEVXXXXXXXXXXXILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGST 139
TMIVGE+ ILVTPLGALSIIISA LA I+L+EKLH FGILGC LC+VGS
Sbjct: 73 TMIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCALCIVGSV 132
Query: 140 TIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGV 199
TIVLHAPQE++I SV EVW LATEPAFLFYA V+ A VLI +FIP YGQ+H+MVYIGV
Sbjct: 133 TIVLHAPQEQDIVSVLEVWNLATEPAFLFYAAAVVGAAIVLIVQFIPLYGQSHVMVYIGV 192
Query: 200 CSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFN 259
CSL+GSLSVMSVKALGIALKLTFSG NQL YPQTW+FT++V+ C++TQMNYLNKALDTFN
Sbjct: 193 CSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCVITQMNYLNKALDTFN 252
Query: 260 TAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVD 319
TAVVSPIYY MFTSLTILASVIMFKDWDRQ+ TQI+TE+CGFVTILSGTFLLH T DMVD
Sbjct: 253 TAVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTILSGTFLLHTTTDMVD 312
Query: 320 GLPP---------TLPIRIPKHDED--GYAAEGIPLRSAAEGLPLRSPRAAE 360
G L +RIPKH ED G+ +GI L S +SPR A
Sbjct: 313 GESKGNLSSEEDSHLLLRIPKHSEDSNGFVQDGIIL-SLRRQESAKSPRPAR 363
>AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337
Length = 336
Score = 355 bits (910), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/299 (63%), Positives = 224/299 (74%)
Query: 19 VEGMSADNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLYEPLWWAGM 78
+E MS DNI G++LA+SSS FIG+SFI+ LYEP WWAGM
Sbjct: 1 MEEMSPDNIHGVILAVSSSIFIGSSFIIKKKGLKKAGVSGARAGEGGYGYLYEPWWWAGM 60
Query: 79 ITMIVGEVXXXXXXXXXXXILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGS 138
ITMIVGE+ ILVTPLGALSII SAVLA +L+EKLH+FGILGCVLCVVGS
Sbjct: 61 ITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGS 120
Query: 139 TTIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIG 198
TTIVLHAP E+ I+SV +VW LATEP FL Y+ VL LIF + P+YG+TH++VY+G
Sbjct: 121 TTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHMIVYVG 180
Query: 199 VCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTF 258
+CSL+GSL+VMSVKA+ IA+KLTFSGMNQ Y W+F IVV C + Q+NYLNKALD F
Sbjct: 181 ICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCILQINYLNKALDNF 240
Query: 259 NTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDM 317
NTAV+SP+YY MFT+ TILAS+IMFKDW Q+ QI TE+CGFVTILSGTFLLHKTKDM
Sbjct: 241 NTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTILSGTFLLHKTKDM 299
>AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336
Length = 335
Score = 350 bits (898), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/315 (59%), Positives = 230/315 (73%)
Query: 19 VEGMSADNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLYEPLWWAGM 78
++ MS DNI G++LA+SSS FIG+SFI+ L EP WWAGM
Sbjct: 1 MDQMSPDNINGVILAVSSSIFIGSSFIIKKKGLKKAGASGVRAGEGGYGYLKEPWWWAGM 60
Query: 79 ITMIVGEVXXXXXXXXXXXILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGS 138
ITMIVGEV ILVTPLGALSII SAVLA +LKEKLH+FGILGC+LCVVGS
Sbjct: 61 ITMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCILCVVGS 120
Query: 139 TTIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIG 198
TTIVLHAP E++I+SV ++W LA EP FL Y+ ++ +LIF + P+YG+TH++VY+G
Sbjct: 121 TTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHMIVYVG 180
Query: 199 VCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTF 258
+CSL+GSL+VMSVKA+ IA+KLTFSG NQ Y TW+F +VV C + Q+NYLNKALDTF
Sbjct: 181 ICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCILQINYLNKALDTF 240
Query: 259 NTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMV 318
NTAV+SP+YY MFT+ TI+AS+IMFKDW Q+ +I TE+CGFVTILSGTFLLHKTKDM
Sbjct: 241 NTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTILSGTFLLHKTKDMG 300
Query: 319 DGLPPTLPIRIPKHD 333
+ I +P D
Sbjct: 301 NSASGRGSISMPTRD 315
>AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329
Length = 328
Score = 340 bits (873), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/295 (55%), Positives = 212/295 (71%)
Query: 22 MSADNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLYEPLWWAGMITM 81
M DN KGL+LA++SS FIG+SFI+ L EPLWWAGM+TM
Sbjct: 1 METDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTM 60
Query: 82 IVGEVXXXXXXXXXXXILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGSTTI 141
IVGE +LVTPLGALSIIISAVLA +LKEKL G+LGCV C+VGS I
Sbjct: 61 IVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVI 120
Query: 142 VLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGVCS 201
V+HAP+E+ +SV E+W LAT+PAFL Y ++ LI F P GQT+I+VYIG+CS
Sbjct: 121 VIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICS 180
Query: 202 LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFNTA 261
L+G+L+VMS+KA+GIA+KLT G++Q+ YPQTW+F +V V C++TQ+ YLNKALDTFN A
Sbjct: 181 LMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAA 240
Query: 262 VVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKD 316
+VSP+YY MFT+LTI+AS IMFKDW Q+ + +E+CGF+T+L+GT +LH T++
Sbjct: 241 IVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTRE 295
>AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327
Length = 326
Score = 328 bits (840), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/301 (53%), Positives = 206/301 (68%)
Query: 22 MSADNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXLYEPLWWAGMITM 81
M +DN GLVLA+SSS FIG+SFI+ L EPLWW G++TM
Sbjct: 1 MVSDNEMGLVLAVSSSVFIGSSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTM 60
Query: 82 IVGEVXXXXXXXXXXXILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGSTTI 141
GE+ +LVTPLGALSIIISAVLA +L EKL G+ GCV C+VGS I
Sbjct: 61 TFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVCCIVGSVMI 120
Query: 142 VLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGVCS 201
V+HAPQE+ +SV E+W LA +PAFL Y ++ LI P GQT+I+VYIG+CS
Sbjct: 121 VIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPLCGQTNILVYIGICS 180
Query: 202 LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFNTA 261
L+GSL+VMS+KA+GIA+KLTF G+NQ+ YP+TW F +V C++ QM YLNKALDTFN A
Sbjct: 181 LMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVVMQMIYLNKALDTFNAA 240
Query: 262 VVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVDGL 321
+VSPIYY MFT+LTI+AS IMFKDW+ QN I +E+CGF+T+L+GT +LH T++
Sbjct: 241 IVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVLTGTVILHSTREEEQAS 300
Query: 322 P 322
P
Sbjct: 301 P 301
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.140 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,068,093
Number of extensions: 216421
Number of successful extensions: 621
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 612
Number of HSP's successfully gapped: 8
Length of query: 360
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 260
Effective length of database: 8,364,969
Effective search space: 2174891940
Effective search space used: 2174891940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 112 (47.8 bits)