Os02g0498300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF803 family protein.
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Os02g0498300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF803 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.25 | 0.507 | 9.97 | -1.07 | 4.16 | -1.05 | 0.483 | -0.293 | -0.835 | 6.4 | 41.95 | 53 | -- | -- |
| 116.39 | 0.502 | 9.97 | -1.08 | 4.17 | -1.06 | 0.444 | -- | -0.836 | 6.4 | 40.17 | 58 | -- | -- |
| 116.81 | 0.503 | 9.97 | -1.07 | 4.17 | -1.04 | -- | -0.191 | -0.837 | 6.4 | 37.03 | 57 | -- | -- |
| 116.88 | 0.504 | 9.97 | -1.07 | 4.17 | -1.05 | -- | -- | -0.837 | 6.39 | 37.29 | 57 | -- | -- |
| 582.78 | 1.12 | 10.1 | -0.67 | -- | 2.97 | -- | -1.73 | -0.377 | -- | -60.86 | 508 | -- | -- |
| 131.54 | 0.538 | 9.96 | -1.07 | 3.85 | -- | 0.395 | -- | -0.82 | 6.85 | -- | -- | -- | -- |
| 131.94 | 0.538 | 9.96 | -1.06 | 3.85 | -- | -- | -- | -0.821 | 6.85 | -- | -- | -- | -- |
| 535.45 | 1.08 | 10 | -1.21 | -- | 3.49 | -- | -- | -0.835 | -- | 65 | 505 | -- | -- |
| 147.08 | 0.565 | 9.94 | -- | 4.14 | -0.947 | -- | -- | -0.723 | 6.4 | 50.56 | 48 | -- | -- |
| 908.69 | 1.41 | 10 | -0.975 | -- | -- | -- | -- | -0.748 | -- | -- | -- | -- | -- |
| 161.48 | 0.594 | 9.94 | -- | 3.84 | -- | -- | -- | -0.703 | 6.86 | -- | -- | -- | -- |
| 553.66 | 1.1 | 9.97 | -- | -- | 3.34 | -- | -- | -0.415 | -- | 66 | 518 | -- | -- |
| 933.76 | 1.43 | 10 | -- | -- | -- | -- | -- | -0.639 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.52 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 2 | 108.54 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 18 |
| 3 | 108.63 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 5 | 109.06 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 7 | 14 |
| 6 | 109.09 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 11 | 109.52 | radiation | 1.0 | 30 | > th | dose independent | rect. | 10 | 9 |
| 22 | 109.69 | humidity | 60.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 25 | 109.93 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 16 |
| 30 | 110.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 32 | 110.30 | radiation | 1.0 | 90 | > th | dose independent | sin | 22 | NA |
| 34 | 110.61 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 61 | 111.27 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 63 | 111.28 | radiation | 10.0 | 90 | < th | dose dependent | sin | 22 | NA |
| 66 | 111.36 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 80 | 111.54 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 10 | 19 |
| 84 | 111.62 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 10 | 16 |
| 88 | 111.68 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 10 | 8 |
| 104 | 111.97 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 106 | 111.98 | humidity | 80.0 | 30 | < th | dose independent | rect. | 10 | 8 |
| 117 | 112.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 16 |
| 122 | 112.18 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 123 | 112.21 | humidity | 60.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 126 | 112.28 | radiation | 1.0 | 90 | < th | dose independent | sin | 22 | NA |
| 133 | 112.38 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 138 | 112.49 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 144 | 112.54 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 16 |
| 159 | 112.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 162 | 112.73 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 169 | 112.80 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 188 | 112.89 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 214 | 113.16 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 215 | 113.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 227 | 113.24 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 234 | 113.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 235 | 113.29 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 242 | 113.36 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 1 |
| 244 | 113.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 248 | 113.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 251 | 113.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 312 | 113.64 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 315 | 113.67 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 331 | 113.83 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 333 | 113.84 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 10 | 12 |
| 334 | 113.84 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 342 | 113.85 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 344 | 113.86 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 351 | 113.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 362 | 113.92 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 9 |
| 401 | 114.00 | humidity | 70.0 | 10 | > th | dose independent | rect. | 7 | 14 |
| 406 | 114.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 418 | 114.03 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 506 | 114.34 | humidity | 50.0 | 10 | > th | dose dependent | sin | 21 | NA |
| 527 | 114.43 | humidity | 70.0 | 10 | > th | dose independent | rect. | 12 | 9 |
| 529 | 114.44 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 8 |
| 532 | 114.45 | radiation | 1.0 | 90 | < th | dose independent | rect. | 11 | 8 |
| 534 | 114.46 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 21 | 21 |
| 554 | 114.55 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 8 |
| 573 | 114.64 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 581 | 114.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 14 |
| 594 | 114.75 | humidity | 60.0 | 720 | > th | dose independent | rect. | 7 | 10 |
| 657 | 114.99 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 6 |
| 679 | 115.10 | humidity | 90.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 682 | 115.10 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 690 | 115.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 694 | 115.14 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 23 | 19 |
| 702 | 115.18 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 708 | 115.19 | humidity | 60.0 | 720 | > th | dose independent | rect. | 22 | 19 |
| 719 | 115.21 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 12 | 9 |
| 729 | 115.24 | humidity | 60.0 | 720 | > th | dose independent | rect. | 22 | 21 |
| 743 | 115.26 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 745 | 115.27 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 751 | 115.27 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 772 | 115.32 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 5 |
| 777 | 115.33 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 8 |
| 778 | 115.33 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 8 |
| 807 | 115.41 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 809 | 115.41 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 811 | 115.41 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 862 | 115.41 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 864 | 115.41 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 865 | 115.41 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 867 | 115.41 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 984 | 115.58 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 21 | 10 |
| 993 | 115.59 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |