BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0108800 Os11g0108800|J013037E22
(45 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0108800 Tyrosine protein kinase domain containing protein 92 1e-19
Os12g0108100 Similar to Ser Thr specific protein kinase-lik... 79 6e-16
Os01g0323000 Similar to Ser Thr specific protein kinase-lik... 77 2e-15
Os01g0664200 Similar to Ser Thr specific protein kinase-lik... 74 3e-14
Os01g0631700 Similar to Ser Thr specific protein kinase-lik... 72 1e-13
Os04g0430000 Similar to Ser Thr specific protein kinase-lik... 71 1e-13
Os10g0497600 Protein kinase domain containing protein 71 2e-13
Os02g0549200 Similar to Ser Thr specific protein kinase-lik... 70 3e-13
Os05g0436100 Similar to Ser Thr specific protein kinase-lik... 66 4e-12
>Os11g0108800 Tyrosine protein kinase domain containing protein
Length = 45
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/45 (100%), Positives = 45/45 (100%)
Query: 1 PLALGRGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
PLALGRGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY
Sbjct: 1 PLALGRGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
>Os12g0108100 Similar to Ser Thr specific protein kinase-like protein
Length = 513
Score = 79.3 bits (194), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/39 (92%), Positives = 36/39 (92%)
Query: 7 GQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
GQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQR Y
Sbjct: 221 GQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRMLVY 259
>Os01g0323000 Similar to Ser Thr specific protein kinase-like protein
Length = 516
Score = 77.4 bits (189), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/39 (89%), Positives = 36/39 (92%)
Query: 7 GQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
GQAE+EFRVEVEAIGHVRHKNLVRLLGYCVEGTQR Y
Sbjct: 228 GQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGTQRMLVY 266
>Os01g0664200 Similar to Ser Thr specific protein kinase-like protein
Length = 492
Score = 73.6 bits (179), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/39 (84%), Positives = 34/39 (87%)
Query: 7 GQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
GQAE+EFRVEVEAIGHVRHKNLVRLLGYCVEG R Y
Sbjct: 219 GQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVY 257
>Os01g0631700 Similar to Ser Thr specific protein kinase-like protein
Length = 509
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/39 (84%), Positives = 34/39 (87%)
Query: 7 GQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
GQAE+EFRVEVEAIGHVRHKNLVRLLGYCVEG R Y
Sbjct: 221 GQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVNRMLVY 259
>Os04g0430000 Similar to Ser Thr specific protein kinase-like protein
Length = 311
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/40 (82%), Positives = 34/40 (85%)
Query: 6 RGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
RGQAEREF+VEVEAIG VRHKNLVRLLGYC EG QR Y
Sbjct: 14 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGNQRMLVY 53
>Os10g0497600 Protein kinase domain containing protein
Length = 509
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/39 (84%), Positives = 34/39 (87%)
Query: 7 GQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
GQAE+EFRVEVEAIGHVRHKNLVRLLGYCVEG R Y
Sbjct: 224 GQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVY 262
>Os02g0549200 Similar to Ser Thr specific protein kinase-like protein
Length = 506
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/40 (80%), Positives = 34/40 (85%)
Query: 6 RGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
RGQAE+EF+VEVEAIG VRHKNLVRLLGYC EG QR Y
Sbjct: 212 RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGNQRMLVY 251
>Os05g0436100 Similar to Ser Thr specific protein kinase-like protein
Length = 538
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 33/40 (82%)
Query: 6 RGQAEREFRVEVEAIGHVRHKNLVRLLGYCVEGTQRYGYY 45
RGQAEREF+VEVEAIG VRHKNLVRLLGYC EG R Y
Sbjct: 238 RGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRILVY 277
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.145 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 1,458,804
Number of extensions: 36167
Number of successful extensions: 1074
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1074
Number of HSP's successfully gapped: 9
Length of query: 45
Length of database: 17,035,801
Length adjustment: 19
Effective length of query: 26
Effective length of database: 16,043,735
Effective search space: 417137110
Effective search space used: 417137110
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)