Os11g0108800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tyrosine protein kinase domain containing protein.
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Os11g0108800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tyrosine protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 265.79 | 0.766 | 7.08 | -3.26 | 0.73 | 1.99 | 0.636 | -2.22 | -0.304 | 1.35 | 28.54 | 1263 | -- | -- |
| 266.2 | 0.76 | 7.03 | -2.82 | 0.731 | 1.75 | 0.601 | -- | -0.267 | 1.3 | 28.46 | 1263 | -- | -- |
| 267.41 | 0.762 | 7.08 | -3.22 | 0.727 | 1.97 | -- | -1.86 | -0.314 | 1.38 | 28.44 | 1263 | -- | -- |
| 267.68 | 0.762 | 7.03 | -2.83 | 0.723 | 1.76 | -- | -- | -0.268 | 1.32 | 28.49 | 1257 | -- | -- |
| 297.1 | 0.803 | 7.1 | -3.32 | -- | 2.22 | -- | -1.86 | -0.455 | -- | 27.37 | 1220 | -- | -- |
| 407.97 | 0.947 | 7.07 | -2.3 | 1 | -- | 1.03 | -- | -0.434 | 1.36 | -- | -- | -- | -- |
| 412.32 | 0.951 | 7.07 | -2.34 | 1 | -- | -- | -- | -0.44 | 1.37 | -- | -- | -- | -- |
| 297.05 | 0.803 | 7.06 | -2.91 | -- | 2.03 | -- | -- | -0.414 | -- | 27.1 | 1215 | -- | -- |
| 465.49 | 1 | 6.95 | -- | 0.748 | 1.35 | -- | -- | 0.108 | 1.27 | 31.01 | 1181 | -- | -- |
| 474.23 | 1.02 | 7.06 | -2.3 | -- | -- | -- | -- | -0.419 | -- | -- | -- | -- | -- |
| 556.06 | 1.1 | 7.01 | -- | 0.962 | -- | -- | -- | -0.179 | 1.28 | -- | -- | -- | -- |
| 498.73 | 1.04 | 6.93 | -- | -- | 1.5 | -- | -- | 0.152 | -- | 30.95 | 1166 | -- | -- |
| 613.27 | 1.16 | 7 | -- | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 270.07 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 5 | 270.64 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 61 | 271.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 133 | 272.52 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 138 | 272.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 139 | 272.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 140 | 272.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 167 | 272.87 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 280 | 273.57 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 282 | 273.70 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 386 | 275.78 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 404 | 276.15 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 416 | 276.18 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 482 | 278.10 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 495 | 278.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 498 | 278.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 499 | 278.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 504 | 278.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 516 | 278.48 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 538 | 278.63 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 541 | 278.67 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 567 | 278.88 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 615 | 279.20 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 617 | 279.23 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 643 | 279.37 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 652 | 279.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 658 | 279.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 659 | 279.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 670 | 279.42 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 672 | 279.43 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 684 | 279.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 699 | 279.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 18 |
| 894 | 280.19 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |