Os01g0664200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ser Thr specific protein kinase-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0664200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Ser Thr specific protein kinase-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349.03 | 0.878 | 8.16 | -2.72 | 1 | -2.04 | 0.5 | -0.378 | -0.683 | 2.14 | 72 | 1302 | -- | -- |
| 347.76 | 0.869 | 8.16 | -2.79 | 0.911 | -2.1 | 0.671 | -- | -0.694 | 2.52 | 72.73 | 1253 | -- | -- |
| 348.92 | 0.87 | 8.16 | -2.72 | 0.939 | -2.06 | -- | -0.416 | -0.681 | 2.32 | 72.01 | 1263 | -- | -- |
| 349.35 | 0.871 | 8.17 | -2.8 | 0.91 | -2.11 | -- | -- | -0.7 | 2.4 | 72.63 | 1254 | -- | -- |
| 390.12 | 0.92 | 8.16 | -2.8 | -- | -2.42 | -- | -0.211 | -0.694 | -- | 72 | 1206 | -- | -- |
| 499.45 | 1.05 | 8.1 | -2.37 | 1.34 | -- | 0.914 | -- | -0.421 | 2.06 | -- | -- | -- | -- |
| 502.6 | 1.05 | 8.11 | -2.4 | 1.34 | -- | -- | -- | -0.426 | 2 | -- | -- | -- | -- |
| 390.35 | 0.92 | 8.17 | -2.83 | -- | -2.44 | -- | -- | -0.706 | -- | 72.49 | 1206 | -- | -- |
| 550.66 | 1.09 | 8.1 | -- | 0.97 | -1.75 | -- | -- | -0.398 | 2.17 | 73 | 1286 | -- | -- |
| 610.23 | 1.15 | 8.1 | -2.34 | -- | -- | -- | -- | -0.394 | -- | -- | -- | -- | -- |
| 654.05 | 1.2 | 8.05 | -- | 1.29 | -- | -- | -- | -0.159 | 1.96 | -- | -- | -- | -- |
| 590.68 | 1.13 | 8.09 | -- | -- | -2.26 | -- | -- | -0.387 | -- | 74.01 | 1224 | -- | -- |
| 754.87 | 1.28 | 8.04 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 355.07 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 7 | 357.93 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 11 | 358.53 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 19 | 358.81 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 45 | 359.42 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 20 |
| 86 | 360.79 | humidity | 50 | 1440 | > th | dose dependent | sin | 19 | NA |
| 98 | 361.03 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 109 | 361.18 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 177 | 362.18 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 206 | 362.55 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 211 | 362.60 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 217 | 362.71 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 218 | 362.72 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 264 | 363.16 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 291 | 363.43 | humidity | 70 | 1440 | < th | dose independent | sin | 14 | NA |
| 295 | 363.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 337 | 363.80 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 369 | 364.18 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 503 | 365.37 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 547 | 365.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 600 | 366.10 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 665 | 366.56 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 711 | 367.05 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 723 | 367.18 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 760 | 367.46 | humidity | 70 | 1440 | > th | dose independent | sin | 15 | NA |
| 801 | 367.87 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 808 | 367.90 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 920 | 369.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 928 | 369.34 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 931 | 369.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 937 | 369.42 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 945 | 369.57 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 954 | 369.67 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 991 | 370.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 992 | 370.04 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |