BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0548000 Os10g0548000|AK068549
(319 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0548000 Similar to Short-chain dehydrogenase Tic32 592 e-169
Os09g0570300 Similar to Short-chain dehydrogenase Tic32 328 3e-90
Os11g0181700 Similar to Short-chain dehydrogenase Tic32 310 8e-85
Os11g0181800 Similar to Short-chain dehydrogenase Tic32 305 2e-83
Os01g0151700 Similar to Short-chain dehydrogenase Tic32 300 8e-82
Os04g0291100 Similar to Short-chain dehydrogenase Tic32 298 5e-81
Os04g0291000 Glucose/ribitol dehydrogenase family protein 215 3e-56
Os03g0115700 Short-chain dehydrogenase/reductase SDR family... 211 6e-55
Os10g0547600 137 2e-32
Os10g0547950 Similar to Short-chain dehydrogenase Tic32 89 6e-18
Os02g0116500 Similar to Protochlorophyllide reductase homol... 78 7e-15
Os06g0129100 Similar to Short-chain dehydrogenase Tic32 75 5e-14
Os04g0678700 Similar to Protochlorophyllide reductase (EC 1... 66 4e-11
>Os10g0548000 Similar to Short-chain dehydrogenase Tic32
Length = 319
Score = 592 bits (1526), Expect = e-169, Method: Compositional matrix adjust.
Identities = 294/319 (92%), Positives = 294/319 (92%)
Query: 1 MWFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXX 60
MWFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLAL
Sbjct: 1 MWFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALRGVRVVM 60
Query: 61 XXXXXXXGHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGI 120
GHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDS AGI
Sbjct: 61 AVRNVAAGHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSLNLPLNILINNAGI 120
Query: 121 LSKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYP 180
LSKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYP
Sbjct: 121 LSKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYP 180
Query: 181 EGICFDSVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLF 240
EGICFDSVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLF
Sbjct: 181 EGICFDSVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLF 240
Query: 241 KNWTMANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNA 300
KNWTMANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNA
Sbjct: 241 KNWTMANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNA 300
Query: 301 ELAKKLWEFSSNIVSAAKL 319
ELAKKLWEFSSNIVSAAKL
Sbjct: 301 ELAKKLWEFSSNIVSAAKL 319
>Os09g0570300 Similar to Short-chain dehydrogenase Tic32
Length = 316
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/314 (52%), Positives = 218/314 (69%), Gaps = 2/314 (0%)
Query: 2 WFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXXX 61
W F R+GPSGFS ASTA++VTAG+ A GL A+VTGASSGIG ET RVLA+
Sbjct: 5 WLFR--RSGPSGFSWASTADQVTAGLSAAGLTAIVTGASSGIGAETARVLAIRGAHVVMA 62
Query: 62 XXXXXXGHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGIL 121
R+AI A+ A + ++E+DL+SMDSVR FAS+F + AG++
Sbjct: 63 VRNLAAAQPVRDAILADAPAASLDLMELDLASMDSVRAFASDFAAKGLPLNILINNAGVM 122
Query: 122 SKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYPE 181
+ S DG+EL FATNH+GHFLLT+LLLE MK TSR + VEGRI+NVSS GH Y E
Sbjct: 123 ATPFSLSKDGIELQFATNHVGHFLLTHLLLETMKKTSRESNVEGRIVNVSSEGHRFAYRE 182
Query: 182 GICFDSVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLFK 241
GI F + D S +++ AYGQSKLANILH+ ELAR K +GVNI+AN++HPG + TNL +
Sbjct: 183 GIRFAKINDESEYNSIGAYGQSKLANILHANELARRFKDEGVNITANSLHPGSIITNLLR 242
Query: 242 NWTMANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNAE 301
+ ++ + + T+G++V K +QGAATTCYVALHPQV G+SGKYFS+ N+ S + ++ E
Sbjct: 243 HHSILDVLHRTLGKLVLKNAQQGAATTCYVALHPQVKGVSGKYFSDSNVNEASEKGNDME 302
Query: 302 LAKKLWEFSSNIVS 315
LAK+LWE+S +++
Sbjct: 303 LAKRLWEYSIELIT 316
>Os11g0181700 Similar to Short-chain dehydrogenase Tic32
Length = 332
Score = 310 bits (794), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 159/319 (49%), Positives = 213/319 (66%), Gaps = 8/319 (2%)
Query: 2 WFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXXX 61
W ++ R GPSG STAEEVTAGVDA L A+VTGA++GIG ET RVLA
Sbjct: 6 WPWDRRRRGPSGLGPTSTAEEVTAGVDATHLTAIVTGATNGIGRETARVLARRGAEVIIP 65
Query: 62 XXXXXXGHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGIL 121
G+ +++I E+ G+ +HV+EMDL+S+DSVRRFA+ FDS AGI+
Sbjct: 66 ARTMESGNAVKQSIAEEVPGSRLHVMEMDLASLDSVRRFATAFDSSHTHLNILINNAGIM 125
Query: 122 SKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYPE 181
S DG+EL FATNH+GHFLLTNLLL+ MKST+R TGV+GRI+NVSS H +
Sbjct: 126 GCPFKLSKDGIELQFATNHVGHFLLTNLLLDKMKSTARKTGVQGRIVNVSSIAH--KRSD 183
Query: 182 GICFD--SVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNL 239
G CFD + D SR+ IAY SKLANILH+ ELA+ + +G N++AN++HPG + TN+
Sbjct: 184 GSCFDLNKLNDKSRYKPLIAYAHSKLANILHANELAKRFQEEGCNLTANSLHPGVILTNI 243
Query: 240 FKNWTMANAVVNTI---GRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQ 296
+ + + N+V+ +I G + K +QGAATTCY+ALHP++ +SGKYF++C TP
Sbjct: 244 TR-YVVTNSVMVSILSVGNLFLKNTQQGAATTCYLALHPELKDVSGKYFADCKEATPRPA 302
Query: 297 ASNAELAKKLWEFSSNIVS 315
A +AELAK+LW+FS +V
Sbjct: 303 ARDAELAKRLWDFSEQLVD 321
>Os11g0181800 Similar to Short-chain dehydrogenase Tic32
Length = 329
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 215/313 (68%), Gaps = 8/313 (2%)
Query: 8 RNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXXXXXXXXX 67
RNGPSGF GASTA+EVTAGVDA L VVTGA++GIG ET RVLAL
Sbjct: 12 RNGPSGFGGASTADEVTAGVDASRLTVVVTGATNGIGKETARVLALRGAEVILPARTLES 71
Query: 68 GHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGILSKDCIR 127
G K ++++ EI + +HV+EMDLSS+DSVR FA F+S AG++S
Sbjct: 72 GMKVKQSLAEEIPSSKLHVMEMDLSSLDSVRSFAKSFNSSYRHLNVLINNAGVMSCPFGL 131
Query: 128 SIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYPEGICF-- 185
S DG+EL FATNH+GHFLLTNLLL+ MK+T++ TG++GRIINVSS H +G CF
Sbjct: 132 SKDGIELQFATNHVGHFLLTNLLLDKMKATAKETGLQGRIINVSSISH--RGSDGSCFDL 189
Query: 186 DSVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLFKNWTM 245
D + D S++ + AYG SKLANILH+ EL+R + +G N++AN++HPG + TNL ++ +
Sbjct: 190 DKLNDKSKYRPFKAYGHSKLANILHANELSRRFQEEGCNLTANSLHPGVIATNLPRH-IL 248
Query: 246 ANAVVNTIGRIV---CKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNAEL 302
N+++ +I ++ K++ QGAAT CY+ALHP + +SGKYF++CN TP++ A +AEL
Sbjct: 249 TNSLIISIFSVMKPFLKSIPQGAATNCYLALHPGLKDVSGKYFADCNEATPTAVARDAEL 308
Query: 303 AKKLWEFSSNIVS 315
AKKLWEFS + S
Sbjct: 309 AKKLWEFSEELTS 321
>Os01g0151700 Similar to Short-chain dehydrogenase Tic32
Length = 321
Score = 300 bits (769), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 206/310 (66%)
Query: 8 RNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXXXXXXXXX 67
+ G SGF STAE+VTAGVDA GL +VTG +SGIGLET+RV A+
Sbjct: 10 KAGASGFGSGSTAEQVTAGVDATGLTVIVTGGASGIGLETSRVFAMRGAHVIIAARNTEA 69
Query: 68 GHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGILSKDCIR 127
R+ I E A + VL++DLSS+ SVR FA +F+S AG++
Sbjct: 70 ASVVRKKIIEENPKAHIDVLKLDLSSLKSVRAFADQFNSMNLPLNILINNAGVMFCPFGL 129
Query: 128 SIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYPEGICFDS 187
S DG+E+ FATNH+GHFLLTNLLL+NMK+T+++TG+EGRI+N+SS H+ TYP+GI FD
Sbjct: 130 SEDGVEMQFATNHLGHFLLTNLLLDNMKATAKSTGIEGRIVNLSSVAHLHTYPKGIEFDK 189
Query: 188 VKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLFKNWTMAN 247
+ D + +AYGQSKLANILH+ EL+R LK +G NI+ N +HPG + TNL ++
Sbjct: 190 LNDEKTYDDKMAYGQSKLANILHAKELSRRLKEEGANITINCVHPGLIMTNLMRHSFFLM 249
Query: 248 AVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNAELAKKLW 307
V+ I+ K+V QGAATTCYV L+PQ+ G++G+YF++CN+E S A N LAK+LW
Sbjct: 250 RVLQFATYILWKSVPQGAATTCYVGLNPQLKGVTGQYFADCNVEKTSRFARNDALAKQLW 309
Query: 308 EFSSNIVSAA 317
EFS ++ ++
Sbjct: 310 EFSEKLIKSS 319
>Os04g0291100 Similar to Short-chain dehydrogenase Tic32
Length = 314
Score = 298 bits (762), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 203/314 (64%), Gaps = 1/314 (0%)
Query: 1 MWFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXX 60
MW R PSGFS +STAEEVTA VD GL AVVTGASSGIG ET RVLA+
Sbjct: 1 MWGL-LRRRSPSGFSPSSTAEEVTAAVDGSGLVAVVTGASSGIGAETCRVLAMRGLHVVM 59
Query: 61 XXXXXXXGHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGI 120
G + R+ I ++ A + +L++DLS M SVRRFA F++ AGI
Sbjct: 60 GVRNSSAGARVRDEIVRQLPAAKIEMLDLDLSLMSSVRRFAENFNALNLPLNILVNNAGI 119
Query: 121 LSKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYP 180
S +G+ELHF+TNH+GHFLLT+LLLE MK T+ +G+EGR++ V+S+ + Y
Sbjct: 120 AFVPFKLSEEGIELHFSTNHLGHFLLTDLLLEKMKVTAIESGIEGRVVIVASNSYKHPYR 179
Query: 181 EGICFDSVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLF 240
EGI FD + D S ++ AYGQSKLANILHS L+ LK ++ N++HPG V TN+
Sbjct: 180 EGIRFDKINDESGYNKIFAYGQSKLANILHSNLLSSNLKEQDAKVTVNSLHPGAVVTNIM 239
Query: 241 KNWTMANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNA 300
++W N +++T+G+ K VEQGAAT CYVALHPQV G++GKYF +CN+ S A +
Sbjct: 240 RHWYFVNGMLSTLGKFFVKGVEQGAATVCYVALHPQVAGVTGKYFVDCNVTELKSHALDM 299
Query: 301 ELAKKLWEFSSNIV 314
LAK+LW+FS N++
Sbjct: 300 GLAKRLWDFSLNLI 313
>Os04g0291000 Glucose/ribitol dehydrogenase family protein
Length = 280
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 172/310 (55%), Gaps = 35/310 (11%)
Query: 1 MWFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXX 60
MW R+ SGFS +STAEEVTAG+D GL A++TGASSGIG ET RVL +
Sbjct: 1 MWGL-LRRSSSSGFSSSSTAEEVTAGIDGSGLVALITGASSGIGAETCRVLVMRGVYVVM 59
Query: 61 XXXXXXXGHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGI 120
G + R+ I ++ A + +L +DLSSM S G
Sbjct: 60 GVRNLSAGARVRDEILKQVPSAKMEILNLDLSSMSS----------------------GF 97
Query: 121 LSKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYP 180
+ C S + L I +MK T+ +G EGR++ V+S + L+YP
Sbjct: 98 VL--CPSSFQRMTLSCILQRI----------TSMKVTAIESGKEGRVVIVASVSYSLSYP 145
Query: 181 EGICFDSVKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLF 240
GICFD + D S ++ ++AYGQSKLANILHS L+ LK + N++HPG V TN+
Sbjct: 146 GGICFDKINDESGYNRFLAYGQSKLANILHSNLLSSHLKEQDAKVIVNSLHPGAVATNIL 205
Query: 241 KNWTMANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNA 300
+W + IG+ K VEQGAAT CYVALHPQV G++GKYFS+CN+ S A +
Sbjct: 206 HHWCPLYGAIRAIGKYFVKGVEQGAATVCYVALHPQVAGVTGKYFSDCNITELKSHALDM 265
Query: 301 ELAKKLWEFS 310
+LAK+LW+FS
Sbjct: 266 DLAKRLWDFS 275
>Os03g0115700 Short-chain dehydrogenase/reductase SDR family protein
Length = 332
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 179/311 (57%), Gaps = 10/311 (3%)
Query: 10 GPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIGLETTRVLALXXXXXXXXXXXXXXGH 69
G +GF STAE+V D + A++TGA+SGIG ET RVLA
Sbjct: 13 GANGFGSKSTAEDVCP--DLGCITAIITGATSGIGAETARVLAKRGARVVIPARNVKAAE 70
Query: 70 KAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGILSKDCIR-S 128
R IR E GA V VL +DLSS+ SVR FA F S AG S + S
Sbjct: 71 DMRARIRGECPGADVLVLPLDLSSLASVRAFADRFLSLGLPLHLLINNAGKFSHGQLALS 130
Query: 129 IDGLELHFATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYPEGICFDSV 188
DG+E+ FATN++GHFLLT LLL M T+ TGV+GRI+NVSSS H ++ G + +
Sbjct: 131 EDGVEMTFATNYLGHFLLTKLLLGRMAETAAATGVQGRIVNVSSSVH--SWFAGDWAEYL 188
Query: 189 KDLSR----FSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLFKNWT 244
++R + AY SKLAN+LH+ ELA LK G N++ N +HPG V T L ++
Sbjct: 189 DLVTRRKIAYDATQAYAVSKLANVLHTKELAVRLKEMGANVTVNCVHPGIVRTRLNRDRD 248
Query: 245 -MANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNAELA 303
+ +V + + KT+ Q AATTCYVA HP++ G+SG+YF++CN PS A+N A
Sbjct: 249 GLVTDLVFLLLSKLLKTIPQAAATTCYVAAHPRLAGVSGRYFADCNEALPSPAATNRHEA 308
Query: 304 KKLWEFSSNIV 314
++LW+ S +++
Sbjct: 309 ERLWQISESML 319
>Os10g0547600
Length = 259
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 83/129 (64%), Gaps = 24/129 (18%)
Query: 68 GHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGILSKDCIR 127
G A EAIRAEI GAIVHVLEMDLSSMDSVRRFASEFDS
Sbjct: 9 GRNASEAIRAEIPGAIVHVLEMDLSSMDSVRRFASEFDSL-------------------- 48
Query: 128 SIDGLELH-FATNHIGHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYPEGICFD 186
L L+ T GHFLLTNLL+ENMKSTS +GVEGRI+NVSS H YPEGICFD
Sbjct: 49 ---NLPLNILITLMSGHFLLTNLLMENMKSTSSESGVEGRIVNVSSWWHFAIYPEGICFD 105
Query: 187 SVKDLSRFS 195
VK+ SR S
Sbjct: 106 KVKNPSRSS 114
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 75/131 (57%), Gaps = 46/131 (35%)
Query: 187 SVKDLSRFSTYIAYGQSKLANILHSTEL--ARILKGDGVNISANAIHPGFVGTNLFKNWT 244
++ D RFS AY QSKLA+ILHSTEL ARILKG
Sbjct: 173 ALTDERRFSGIFAYPQSKLASILHSTELQLARILKG------------------------ 208
Query: 245 MANAVVNTIGRIVCKTVEQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNAELAK 304
AATTCYVALHPQV GISGKYFSNCNL++PSS ASNAELAK
Sbjct: 209 --------------------AATTCYVALHPQVKGISGKYFSNCNLDSPSSHASNAELAK 248
Query: 305 KLWEFSSNIVS 315
KLWEFSS +VS
Sbjct: 249 KLWEFSSKVVS 259
>Os10g0547950 Similar to Short-chain dehydrogenase Tic32
Length = 80
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 51/69 (73%)
Query: 38 GASSGIGLETTRVLALXXXXXXXXXXXXXXGHKAREAIRAEIHGAIVHVLEMDLSSMDSV 97
GASSGIGLET RV+AL GH+A EAIRAEI GA +HVLEMDLSSMDSV
Sbjct: 3 GASSGIGLETARVMALRGVRVVMAVRNVAAGHRASEAIRAEIPGAGIHVLEMDLSSMDSV 62
Query: 98 RRFASEFDS 106
RRFA+EF++
Sbjct: 63 RRFATEFEA 71
>Os02g0116500 Similar to Protochlorophyllide reductase homologue
Length = 335
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 31/299 (10%)
Query: 31 GLAAVVTGASSGIGLETTRVLALXXXXXXXXXXXXXXGHKAREAIR------AEIHGAI- 83
G++ VVTGA+SGIGLE R LAL A+E I+ +EI +
Sbjct: 15 GVSFVVTGATSGIGLEIARQLALAGGHVVMAVRRTKL---AQELIQKWQNDNSEIGKPLN 71
Query: 84 VHVLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGILS--KDCIRSIDGLELHFATNHI 141
V+E+DL S+DSV +FA +++ AGI S + S DG E H NH+
Sbjct: 72 AEVMELDLLSLDSVVKFADAWNARMAPLHVLINNAGIFSIGEPQRFSKDGYEEHMQVNHL 131
Query: 142 GHFLLTNLLLENMKSTSRTTGVEGRIINVSSSGHILTYPEGICFDSVKDLSRFSTYIAYG 201
LL + S G RI+NV+S H + + + + +F++ + Y
Sbjct: 132 -----APALLAVLLLPSLLRGSPSRIVNVNSVMHTVGFVDAEDMNLTSGKRKFTSLMGYS 186
Query: 202 QSKLANILHSTELARILKGDGVNISANAIHPGFVGTNLFKNWT-MANAVVNTIGRIVCKT 260
SKLA I S+ L R + + I+ PG V TN+ ++ + A + I +
Sbjct: 187 NSKLAQIKFSSMLHRRIPAEA-EINVICASPGIVHTNVARDLPKLVVAAYHLIPYFIFDA 245
Query: 261 VEQGAATTCYVALHPQVTGISGKYFS-----------NCNLETPSSQASNAELAKKLWE 308
++G+ +T + A PQV S +CN S ++ N E ++ +WE
Sbjct: 246 -QEGSRSTLFAASDPQVPDYCEMLKSEDWPVCACISYDCNPMNASEESHNLETSQLVWE 303
>Os06g0129100 Similar to Short-chain dehydrogenase Tic32
Length = 91
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 262 EQGAATTCYVALHPQVTGISGKYFSNCNLETPSSQASNAELAKKLWEFSSNIVSAAK 318
+Q AATTCYVA+HP V G+SGKYF++CN +PS SNA+ A KLW FS + + K
Sbjct: 10 QQAAATTCYVAVHPAVAGVSGKYFADCNEASPSRLGSNADEAAKLWRFSDEVAAEEK 66
>Os04g0678700 Similar to Protochlorophyllide reductase (EC 1.3.1.33) (PCR)
(NADPH- protochlorophyllide oxidoreductase) (POR)
(Fragment)
Length = 387
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 33/260 (12%)
Query: 86 VLEMDLSSMDSVRRFASEFDSXXXXXXXXXXXAGIL---SKDCIRSIDGLELHFATNHIG 142
V+ +DL+S+DSVR+F F A I ++ + DG E+ NH+G
Sbjct: 127 VMHLDLASLDSVRQFVDNFRRSGMPLDALVCNAAIYRPTARQPTFTADGYEMSVGVNHLG 186
Query: 143 HFLLTNLLLENMKS--------------TSRTTGVEGRIINVSSSGHILTYPEGICFDS- 187
HFLL L+L+++K T T + G + + G + G+ +
Sbjct: 187 HFLLARLMLDDLKKSDYPSRRLIILGSITGNTNTLAGNVPPKAGLGDLRGLAGGLRGQNG 246
Query: 188 ---VKDLSRFSTYIAYGQSKLANILHSTELARILKGDGVNISANAIHPGFVGTN-LFK-N 242
+ F AY SK+ N+L E R + I+ +++PG + T LF+ +
Sbjct: 247 SAMIDGAESFDGAKAYKDSKICNMLTMQEFHRRFH-EETGITFASLYPGCIATTGLFREH 305
Query: 243 WTMANAVVNTIGRIVCK---TVEQGAATTCYVALHPQVTGISGKYFS----NCNLETPSS 295
+ + R V K + + V P +T SG Y+S + + E S
Sbjct: 306 IPLFRLLFPPFQRFVTKGFVSEAESGKRLAQVVGDPSLTK-SGVYWSWNKDSASFENQLS 364
Query: 296 Q-ASNAELAKKLWEFSSNIV 314
Q AS+ E A+KLW+ S +V
Sbjct: 365 QEASDPEKARKLWDLSEKLV 384
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,589,517
Number of extensions: 291569
Number of successful extensions: 1004
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 988
Number of HSP's successfully gapped: 16
Length of query: 319
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 218
Effective length of database: 11,762,187
Effective search space: 2564156766
Effective search space used: 2564156766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)