Os10g0548000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Short-chain dehydrogenase Tic32.
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Os10g0548000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Short-chain dehydrogenase Tic32.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.73 | 0.406 | 9.91 | -1.53 | 1.7 | -0.925 | -0.32 | -0.737 | -0.407 | 12.5 | 60.77 | 1233 | -- | -- |
| 75.5 | 0.405 | 9.91 | -1.59 | 1.73 | -0.968 | -0.43 | -- | -0.401 | 12.5 | 58.27 | 1195 | -- | -- |
| 75.12 | 0.404 | 9.91 | -1.52 | 1.7 | -0.929 | -- | -0.872 | -0.408 | 12.5 | 61.35 | 1222 | -- | -- |
| 76.25 | 0.407 | 9.91 | -1.63 | 1.72 | -0.953 | -- | -- | -0.383 | 12.5 | 55.2 | 1219 | -- | -- |
| 155.65 | 0.584 | 9.94 | -1.64 | -- | -1.27 | -- | 0.959 | -0.43 | -- | 61.35 | 1222 | -- | -- |
| 94 | 0.455 | 9.9 | -1.58 | 1.51 | -- | -0.547 | -- | -0.352 | 12.4 | -- | -- | -- | -- |
| 95.28 | 0.457 | 9.91 | -1.6 | 1.51 | -- | -- | -- | -0.355 | 12.4 | -- | -- | -- | -- |
| 156.78 | 0.586 | 9.95 | -1.61 | -- | -1.16 | -- | -- | -0.461 | -- | 67.33 | 1642 | -- | -- |
| 140.39 | 0.552 | 9.91 | -- | 1.66 | -1.21 | -- | -- | -0.453 | 12.3 | 80.72 | 2550 | -- | -- |
| 238.72 | 0.722 | 9.93 | -1.65 | -- | -- | -- | -- | -0.379 | -- | -- | -- | -- | -- |
| 162.66 | 0.597 | 9.87 | -- | 1.53 | -- | -- | -- | -0.177 | 12.4 | -- | -- | -- | -- |
| 225.02 | 0.701 | 9.91 | -- | -- | -1.19 | -- | -- | -0.284 | -- | 67.33 | 1642 | -- | -- |
| 310.52 | 0.823 | 9.89 | -- | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.20 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 2 | 75.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 3 | 75.25 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 31 | 75.66 | humidity | 70 | 1440 | > th | dose independent | sin | 20 | NA |
| 45 | 75.75 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 8 |
| 51 | 75.84 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 53 | 75.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 57 | 75.89 | humidity | 60 | 1440 | > th | dose dependent | rect. | 23 | 21 |
| 68 | 75.96 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 76 | 76.04 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 90 | 76.09 | humidity | 60 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 94 | 76.11 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 101 | 76.13 | humidity | 60 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 103 | 76.13 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 104 | 76.14 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 106 | 76.14 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 109 | 76.15 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 119 | 76.17 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 160 | 76.21 | humidity | 60 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 193 | 76.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 198 | 76.25 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 244 | 76.29 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 303 | 76.33 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 374 | 76.38 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 403 | 76.42 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 491 | 76.51 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 492 | 76.51 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 536 | 76.55 | humidity | 70 | 1440 | < th | dose independent | sin | 20 | NA |
| 548 | 76.56 | humidity | 70 | 1440 | > th | dose dependent | sin | 0 | NA |
| 564 | 76.58 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 740 | 76.77 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 806 | 76.83 | humidity | 80 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 810 | 76.83 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 852 | 76.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 892 | 76.92 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 905 | 76.94 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 992 | 77.03 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |