Os11g0181700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Short-chain dehydrogenase Tic32.
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Os11g0181700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Short-chain dehydrogenase Tic32.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.07 | 0.418 | 9.2 | -2.15 | 2.08 | -1.13 | 0.478 | -0.369 | -0.671 | 0.632 | 81.01 | 1434 | -- | -- |
| 79.19 | 0.414 | 9.2 | -2.17 | 2.09 | -1.15 | 0.47 | -- | -0.676 | 0.636 | 81 | 1436 | -- | -- |
| 80.05 | 0.417 | 9.2 | -2.17 | 2.08 | -1.15 | -- | -0.313 | -0.674 | 0.633 | 81.01 | 1434 | -- | -- |
| 80.13 | 0.417 | 9.2 | -2.19 | 2.09 | -1.17 | -- | -- | -0.679 | 0.635 | 81 | 1436 | -- | -- |
| 241.15 | 0.723 | 9.18 | -2.35 | -- | -2.44 | -- | 0.315 | -0.711 | -- | 78 | 1022 | -- | -- |
| 95.59 | 0.458 | 9.19 | -2.18 | 2.08 | -- | 0.585 | -- | -0.609 | 0.695 | -- | -- | -- | -- |
| 97.05 | 0.461 | 9.19 | -2.2 | 2.08 | -- | -- | -- | -0.612 | 0.694 | -- | -- | -- | -- |
| 240.77 | 0.723 | 9.17 | -2.27 | -- | -2.38 | -- | -- | -0.678 | -- | 78.11 | 1021 | -- | -- |
| 193.66 | 0.648 | 9.17 | -- | 1.97 | -1.32 | -- | -- | -0.559 | 0.723 | 87.82 | 1490 | -- | -- |
| 368.67 | 0.897 | 9.15 | -2.13 | -- | -- | -- | -- | -0.575 | -- | -- | -- | -- | -- |
| 224.66 | 0.701 | 9.13 | -- | 2.05 | -- | -- | -- | -0.367 | 0.643 | -- | -- | -- | -- |
| 333.68 | 0.851 | 9.17 | -- | -- | -2.32 | -- | -- | -0.654 | -- | 86.24 | 968 | -- | -- |
| 487.87 | 1.03 | 9.1 | -- | -- | -- | -- | -- | -0.339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.18 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 17 |
| 3 | 78.20 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 29 | 78.71 | humidity | 80 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 37 | 78.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 51 | 78.87 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 59 | 78.92 | humidity | 80 | 1440 | > th | dose dependent | sin | 16 | NA |
| 76 | 79.04 | humidity | 70 | 1440 | > th | dose dependent | sin | 14 | NA |
| 90 | 79.10 | humidity | 80 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 106 | 79.19 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 109 | 79.20 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 121 | 79.24 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 122 | 79.24 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 128 | 79.28 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 175 | 79.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 238 | 79.68 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 239 | 79.68 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 244 | 79.69 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 259 | 79.75 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 269 | 79.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 274 | 79.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 277 | 79.80 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 282 | 79.81 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 302 | 79.86 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 311 | 79.88 | humidity | 80 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 351 | 79.97 | humidity | 80 | 1440 | > th | dose independent | sin | 18 | NA |
| 363 | 79.98 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 399 | 80.06 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 432 | 80.11 | humidity | 70 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 501 | 80.22 | humidity | 70 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 636 | 80.47 | humidity | 80 | 1440 | < th | dose independent | sin | 19 | NA |
| 718 | 80.61 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 5 |
| 844 | 80.82 | humidity | 90 | 720 | > th | dose independent | rect. | 17 | 8 |
| 868 | 80.86 | humidity | 90 | 1440 | < th | dose dependent | rect. | 19 | 9 |
| 894 | 80.89 | humidity | 90 | 1440 | < th | dose dependent | sin | 12 | NA |
| 909 | 80.91 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 12 |