Os06g0129100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Short-chain dehydrogenase Tic32.
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Os06g0129100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Short-chain dehydrogenase Tic32.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 553.43 | 1.11 | 5.3 | 3.2 | 1.45 | 3.02 | 0.901 | 4.52 | 1.76 | 1.23 | 20.54 | 1252 | 21.7 | -- |
| 572.71 | 1.11 | 5.45 | 2.62 | 1.59 | 1.9 | 1.88 | -- | 1.6 | 23.7 | 20.58 | 1353 | 23.7 | -- |
| 552.02 | 1.09 | 5.26 | 3.21 | 1.34 | 3.73 | -- | 6.11 | 1.78 | 2.67 | 20.6 | 1199 | 20.5 | -- |
| 584.68 | 1.13 | 5.43 | 2.46 | 1.68 | 2.05 | -- | -- | 1.6 | 0.448 | 20.51 | 1270 | 23.9 | -- |
| 602.51 | 1.14 | 5.17 | 2.84 | -- | 4.58 | -- | 6.56 | 1.89 | -- | 20.5 | 1239 | 18.5 | -- |
| 670.67 | 1.21 | 5.32 | 3.34 | 1.67 | -- | 2 | -- | 2.09 | 23.4 | -- | -- | -- | -- |
| 687.04 | 1.23 | 5.32 | 3.26 | 1.66 | -- | -- | -- | 2.07 | 23.6 | -- | -- | -- | -- |
| 657.82 | 1.19 | 5.45 | 2.36 | -- | 3.33 | -- | -- | 1.45 | -- | 21.8 | 1099 | 16.5 | -- |
| 607.77 | 1.15 | 5.61 | -- | 1.54 | 2.78 | -- | -- | 0.835 | 23.5 | 20.5 | 47520 | 22 | -- |
| 861 | 1.37 | 5.29 | 3.31 | -- | -- | -- | -- | 2.09 | -- | -- | -- | -- | -- |
| 966.99 | 1.45 | 5.41 | -- | 1.7 | -- | -- | -- | 1.71 | 23.8 | -- | -- | -- | -- |
| 765.94 | 1.29 | 5.58 | -- | -- | 2.98 | -- | -- | 0.809 | -- | 21.1 | 47520 | 20.1 | -- |
| 1149.32 | 1.58 | 5.37 | -- | -- | -- | -- | -- | 1.73 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 534.69 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 534.94 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 4 | 537.56 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 5 | 538.77 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 7 | 538.89 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 9 | 539.23 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 14 | 540.07 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 16 | 540.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 21 | 541.10 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 28 | 541.99 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 37 | 542.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 63 | 545.57 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 75 | 546.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 76 | 546.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 77 | 546.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 78 | 546.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 82 | 546.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 83 | 546.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 94 | 547.62 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 98 | 548.00 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 100 | 548.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 102 | 548.19 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 19 |
| 109 | 548.53 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 18 |
| 113 | 548.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 128 | 549.20 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 145 | 549.85 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 20 |
| 147 | 550.01 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 18 |
| 170 | 550.64 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 174 | 550.68 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 178 | 550.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 18 |
| 187 | 550.84 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 194 | 550.97 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 195 | 551.01 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 206 | 551.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 221 | 551.45 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 234 | 551.76 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 7 |
| 235 | 551.79 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 248 | 551.89 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 268 | 552.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 273 | 552.17 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 285 | 552.28 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 289 | 552.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 290 | 552.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 291 | 552.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 324 | 552.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 325 | 552.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 327 | 552.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 416 | 553.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 427 | 553.33 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 472 | 553.67 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 493 | 553.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 538 | 554.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 13 |
| 551 | 554.39 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 557 | 554.43 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 649 | 555.09 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 750 | 555.68 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 758 | 555.76 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 14 |
| 774 | 555.89 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 784 | 555.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 792 | 556.02 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 852 | 556.37 | humidity | 90.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 906 | 556.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 907 | 556.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 912 | 556.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 913 | 556.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 920 | 556.72 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 928 | 556.78 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 7 | NA |
| 930 | 556.78 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 7 | NA |
| 935 | 556.82 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 7 | NA |