BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0191900 Os10g0191900|J075053F10
(335 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0191900 Histone-fold domain containing protein 695 0.0
AK119652 688 0.0
Os05g0304800 Histone-fold domain containing protein 405 e-113
Os01g0580400 Histone-fold domain containing protein 137 1e-32
Os01g0102400 Histone-fold domain containing protein 135 5e-32
Os01g0346900 Histone-fold domain containing protein 134 8e-32
Os02g0170500 Histone-fold domain containing protein 82 4e-16
Os06g0667100 Similar to Nuclear Y/CCAAT-box binding factor ... 79 6e-15
Os09g0480700 Similar to Transcription factor Hap5a-like pro... 75 6e-14
Os03g0251350 Histone-fold domain containing protein 75 9e-14
Os08g0496500 Histone-fold domain containing protein 72 7e-13
>Os10g0191900 Histone-fold domain containing protein
Length = 335
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MPIPEKDGVEDNQEDDTFSRLQLLAQQRHAMEKFWRMSQEQIEESAGNEELILPISRVKN 60
MPIPEKDGVEDNQEDDTFSRLQLLAQQRHAMEKFWRMSQEQIEESAGNEELILPISRVKN
Sbjct: 1 MPIPEKDGVEDNQEDDTFSRLQLLAQQRHAMEKFWRMSQEQIEESAGNEELILPISRVKN 60
Query: 61 IIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTES 120
IIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTES
Sbjct: 61 IIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTES 120
Query: 121 YHFLANVVHGHQALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLANHPPNIPVCP 180
YHFLANVVHGHQALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLANHPPNIPVCP
Sbjct: 121 YHFLANVVHGHQALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLANHPPNIPVCP 180
Query: 181 PIGQSGTQHTTSTHVLMMQGESIHKASKEKSPLKEVMVPTNKVGMTNSSYGVPNGGGATS 240
PIGQSGTQHTTSTHVLMMQGESIHKASKEKSPLKEVMVPTNKVGMTNSSYGVPNGGGATS
Sbjct: 181 PIGQSGTQHTTSTHVLMMQGESIHKASKEKSPLKEVMVPTNKVGMTNSSYGVPNGGGATS 240
Query: 241 SKVVIDSPKGETAQVFSSQHACPSLEDNYVIPIPAGHGDSFRTLDEANIPQLHQEQKNFI 300
SKVVIDSPKGETAQVFSSQHACPSLEDNYVIPIPAGHGDSFRTLDEANIPQLHQEQKNFI
Sbjct: 241 SKVVIDSPKGETAQVFSSQHACPSLEDNYVIPIPAGHGDSFRTLDEANIPQLHQEQKNFI 300
Query: 301 SQDAIVGENIPLNESLEKSKHKDEDLLFPDKDLPE 335
SQDAIVGENIPLNESLEKSKHKDEDLLFPDKDLPE
Sbjct: 301 SQDAIVGENIPLNESLEKSKHKDEDLLFPDKDLPE 335
>AK119652
Length = 335
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/335 (99%), Positives = 334/335 (99%)
Query: 1 MPIPEKDGVEDNQEDDTFSRLQLLAQQRHAMEKFWRMSQEQIEESAGNEELILPISRVKN 60
MPIPEKDGVEDNQEDDTFSRLQLLAQQRHAMEKFWRMSQEQIEESAGN+ELILPISRVKN
Sbjct: 1 MPIPEKDGVEDNQEDDTFSRLQLLAQQRHAMEKFWRMSQEQIEESAGNDELILPISRVKN 60
Query: 61 IIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTES 120
IIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTES
Sbjct: 61 IIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTES 120
Query: 121 YHFLANVVHGHQALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLANHPPNIPVCP 180
YHFLANVVHGHQALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLANHPP+IPVCP
Sbjct: 121 YHFLANVVHGHQALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLANHPPDIPVCP 180
Query: 181 PIGQSGTQHTTSTHVLMMQGESIHKASKEKSPLKEVMVPTNKVGMTNSSYGVPNGGGATS 240
PIGQSGTQHTTSTHVLMMQGESIHKASKEKSPLKEVMVPTNKVGMTNSSYGVPNGGGATS
Sbjct: 181 PIGQSGTQHTTSTHVLMMQGESIHKASKEKSPLKEVMVPTNKVGMTNSSYGVPNGGGATS 240
Query: 241 SKVVIDSPKGETAQVFSSQHACPSLEDNYVIPIPAGHGDSFRTLDEANIPQLHQEQKNFI 300
SKVVIDSPKGETAQVFSSQHACPS EDNYVIPIPAGHGDSFRTLDEANIPQLHQEQKNFI
Sbjct: 241 SKVVIDSPKGETAQVFSSQHACPSPEDNYVIPIPAGHGDSFRTLDEANIPQLHQEQKNFI 300
Query: 301 SQDAIVGENIPLNESLEKSKHKDEDLLFPDKDLPE 335
SQDAIVGENIPLNESLEKSKHKDEDLLFPDKDLPE
Sbjct: 301 SQDAIVGENIPLNESLEKSKHKDEDLLFPDKDLPE 335
>Os05g0304800 Histone-fold domain containing protein
Length = 327
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/331 (63%), Positives = 242/331 (73%), Gaps = 4/331 (1%)
Query: 1 MPIPEKDGVEDNQEDDTFSRLQLLAQQRHAMEKFWRMSQEQIEESAGNEELILPISRVKN 60
M IP K+ VE N+ED+TFSRLQLLAQQRHAME+FWR SQEQIE SAGN E ILPI VKN
Sbjct: 1 MAIPTKEEVEQNEEDNTFSRLQLLAQQRHAMEEFWRRSQEQIEASAGNHEHILPIDCVKN 60
Query: 61 IIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTES 120
+I K MMLSADTP FVTKLCELFVQEL LRAWVCANSHNR+IILGTDIAEAITTTES
Sbjct: 61 VIRPKNDAMMLSADTPTFVTKLCELFVQELTLRAWVCANSHNRDIILGTDIAEAITTTES 120
Query: 121 YHFLANVVHGHQALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLANHPPNIPVCP 180
YHFL NV+ H+ALGS P+I SA K KLD+MTSL HP Q +Q + LA +PP++P+ P
Sbjct: 121 YHFLGNVLRSHKALGSTAPDIDTSARKHIKLDQMTSLYHPTQEMQASRLAGYPPHVPIYP 180
Query: 181 PIGQSGTQHTTSTHVLMMQGESIHKASKEKSPLKEVMVPTNKVGMTNSSYGVPNGGGATS 240
PIGQ GTQH S MMQGES+ +EKS + EVMV TNK+ + N G + GG +S
Sbjct: 181 PIGQMGTQHKLSPFTFMMQGESLLNMKREKSLVNEVMVCTNKMSINNFD-GATSIGGGSS 239
Query: 241 SKVVIDSPKGETAQVFSSQHACPSLEDNYVIPIPAGHGDSFRTLDEANIPQLHQEQKNFI 300
S V I +GET FSSQ+ACPSLEDNYV+P+P GH SF N+ +LHQE+KN
Sbjct: 240 SDVAIVVQQGETTHPFSSQNACPSLEDNYVVPMPTGHVQSFSPPTNINVKKLHQEEKNIY 299
Query: 301 SQDAIVGENIPLNESLEKSKHKDEDLLFPDK 331
SQD V E NESLE S+ KDEDL +K
Sbjct: 300 SQD--VAEEDMSNESLEGSQ-KDEDLFLHEK 327
>Os01g0580400 Histone-fold domain containing protein
Length = 442
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 109/172 (63%), Gaps = 3/172 (1%)
Query: 13 QEDDTFSRLQLLA-QQRHAMEKFWRMSQEQIEESAGNEELILPISRVKNIIHAKEGGMML 71
Q D L+LLA + + M++FWR Q++IE + E +P++R+K I+ +++G MM+
Sbjct: 3 QTLDVPRSLRLLAPKAQQQMDEFWRDRQKEIETTKDFSEHAIPMARLKKIVSSQKGNMMM 62
Query: 72 SADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGH 131
+ D PAF++K+CELFVQEL +RAW A SHNR IIL TDIA+AI +TESY FL +++H H
Sbjct: 63 TFDMPAFLSKMCELFVQELAVRAWASAQSHNRCIILDTDIAKAIASTESYDFLVDILHNH 122
Query: 132 QALGSNIPEIGVSAWKRHKLDEMTSLCHPPQAVQVTDLA-NHPPNIPVCPPI 182
+ + P ++ KR +L + S H P Q+ A + P IP+ P +
Sbjct: 123 RVKHKSTPCSTLTT-KRCRLVDQPSTSHMPYQHQLPQFAPTYTPAIPITPSL 173
>Os01g0102400 Histone-fold domain containing protein
Length = 421
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
Query: 25 AQQRHAMEKFWRMSQEQIEESAGNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCE 84
AQQ+ M++FWR Q++IE + E +P++R+K I +++G MM+S D PAF++K+CE
Sbjct: 18 AQQQ--MDEFWRDRQKEIETTKDFSEHAIPMARLKKIASSQKGNMMMSFDMPAFLSKMCE 75
Query: 85 LFVQELILRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGHQALGSNIPEIGVS 144
LFVQEL +RAW A SHNR IIL TDIAEAI +TESY FL +++H H+ + P ++
Sbjct: 76 LFVQELAVRAWASAQSHNRCIILDTDIAEAIASTESYDFLVDILHNHREKHKSTPCSTLT 135
Query: 145 AWKRHKLDEMTSLCHPPQAVQVTDLA-NHPPNIPVCPPI 182
KR +L + S PP Q+ A + P IP+ P +
Sbjct: 136 T-KRCRLVDQPSTSRPPYQHQLPLFAPTYTPAIPITPSL 173
>Os01g0346900 Histone-fold domain containing protein
Length = 444
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 107/171 (62%), Gaps = 6/171 (3%)
Query: 24 LAQQRHAMEKFWRMSQEQIEESAGNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLC 83
+AQQ+ M++FWR Q++IE + E ++P++R+K I+ +++G MM++ D PAF++K+C
Sbjct: 17 MAQQQ--MDEFWRDRQKEIEMTKDFSEHMIPMARLKKIVSSQKGNMMMTFDMPAFLSKMC 74
Query: 84 ELFVQELILRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGHQALGSNIPEIGV 143
ELFVQEL RAW CA SHNR IIL DIAEA+ +TESY FL +++H H + P
Sbjct: 75 ELFVQELAARAWACAQSHNRCIILDMDIAEAVASTESYDFLVDILHNHSVKQKSTP---C 131
Query: 144 SAWKRHKLDEMTSLCHPPQAVQVTDLA-NHPPNIPVCPPIGQSGTQHTTST 193
S+ KR +L + S H P + A + IP+ P + +Q T S+
Sbjct: 132 SSTKRCRLVDQPSTSHIPHQHLLPQFAPTYTLAIPITPSLMPLISQCTPSS 182
>Os02g0170500 Histone-fold domain containing protein
Length = 259
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 31 MEKFWRMSQEQIEESAGNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQEL 90
+ +FW E+IE++ + LP++R+K I+ A E M+SA+ P K CE+F+ EL
Sbjct: 84 LREFWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILEL 143
Query: 91 ILRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGHQAL--GSNIPEIGV 143
LR+W+ + R + DIA AIT T+ Y FL ++V + G +P +G+
Sbjct: 144 TLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGL 198
>Os06g0667100 Similar to Nuclear Y/CCAAT-box binding factor C subunit NF-YC
Length = 250
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 34 FWRMSQEQIEESAGNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQELILR 93
FW IE++ + LP++R+K I+ A E M+SA+ P K CE+F+ EL LR
Sbjct: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
Query: 94 AWVCANSHNREIILGTDIAEAITTTESYHFLANVV-------HGHQALGSNIPEIGVSA 145
+W+ + R + DIA AIT T+ Y FL ++V G + +P +GV A
Sbjct: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGVGLPRAGLPPLGVPA 201
>Os09g0480700 Similar to Transcription factor Hap5a-like protein
Length = 168
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 10 EDNQEDDTFS------RLQLLAQQR--HAMEKFWRMSQEQIEESAGNEELILPISRVKNI 61
E+ Q+ ++FS Q LA+ R ++ FW +IE + + LP++R+K I
Sbjct: 2 EEKQQRESFSIPKSPPPPQTLAKLRSQQQLQMFWAEQYREIEATTDFKNHNLPLARIKKI 61
Query: 62 IHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTESY 121
+ A E M++A+ P + CE+F+ EL R W A + R + +DIA AI TE +
Sbjct: 62 MKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVF 121
Query: 122 HFLANVV 128
FL ++V
Sbjct: 122 DFLVDIV 128
>Os03g0251350 Histone-fold domain containing protein
Length = 246
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 34 FWRMSQEQIEESAGNE--ELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQELI 91
FW +++ E ++ ++ LP++R+K I+ A E M+SA+ P K CELF+ EL
Sbjct: 49 FWAYQRQEAERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELT 108
Query: 92 LRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGHQA 133
+R+W+ A + R + D+A AI T+ + FL ++V +A
Sbjct: 109 IRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEA 150
>Os08g0496500 Histone-fold domain containing protein
Length = 205
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 34 FWRMSQEQIEESAGNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQELILR 93
FW +IE + + LP++R+K I+ A E M++A+ P + CE+F+ EL R
Sbjct: 72 FWAEQYREIEHTTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHR 131
Query: 94 AWVCANSHNREIILGTDIAEAITTTESYHFLANVV 128
W A + R + +DIA AI TE + FL ++V
Sbjct: 132 GWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIV 166
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.130 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,655,703
Number of extensions: 538747
Number of successful extensions: 1242
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1240
Number of HSP's successfully gapped: 12
Length of query: 335
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 234
Effective length of database: 11,762,187
Effective search space: 2752351758
Effective search space used: 2752351758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 156 (64.7 bits)