BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0486500 Os09g0486500|AK106128
(164 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0486500 Multiple stress-responsive zinc-finger protein... 232 7e-62
Os08g0504700 Similar to Multiple stress-responsive zinc-fin... 116 9e-27
Os03g0792900 Similar to PVPR3 protein 107 3e-24
Os07g0168800 Zinc finger, A20-type domain containing protein 102 1e-22
Os05g0299700 Similar to Expressed protein (Zinc finger-like... 100 3e-22
Os06g0612800 Similar to PVPR3 protein 100 4e-22
Os02g0195600 Zinc finger, A20-type domain containing protein 100 5e-22
Os03g0793000 Zinc finger, A20-type domain containing protein 92 2e-19
Os03g0793300 Similar to Expressed protein (Zinc finger-like... 91 4e-19
Os01g0765900 89 1e-18
Os01g0718000 Zinc finger, A20-type domain containing protein 88 2e-18
Os02g0530300 Zinc finger, A20-type domain containing protein 86 8e-18
Os08g0436400 84 5e-17
Os07g0169500 77 8e-15
>Os09g0486500 Multiple stress-responsive zinc-finger protein ISAP1 (Stress-
associated protein 1) (OsISAP1)
Length = 164
Score = 232 bits (592), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/164 (71%), Positives = 118/164 (71%)
Query: 1 MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXXVL 60
MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF VL
Sbjct: 1 MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPVL 60
Query: 61 DKQPPRXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXKTSAVNRCSRCRKRVGLTGFRCR 120
DKQPPR M KTSAVNRCSRCRKRVGLTGFRCR
Sbjct: 61 DKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCR 120
Query: 121 CGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
CGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF
Sbjct: 121 CGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
>Os08g0504700 Similar to Multiple stress-responsive zinc-finger protein ISAP1
(Stress- associated protein 1) (OsISAP1)
Length = 170
Score = 116 bits (290), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
VNRC CR+RVGLTGFRCRCG L+CG HRYSDRH CS+DYKSAARDAIAR+NPVVRAAKI
Sbjct: 108 VNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKI 167
Query: 162 VRF 164
VRF
Sbjct: 168 VRF 170
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 40/42 (95%)
Query: 1 MAQRDKKDQEPTELRAPEITLCANSCGFPGNPATQNLCQNCF 42
MAQR+KK +EPTELRAPE+TLCANSCGFPGNPAT NLCQNCF
Sbjct: 1 MAQREKKVEEPTELRAPEMTLCANSCGFPGNPATNNLCQNCF 42
>Os03g0792900 Similar to PVPR3 protein
Length = 160
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 1 MAQRD-KKDQEPTELRAPEI-TLCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXX 58
MAQ KK+ E T + PE LC N+CGF G+ T+N+C C+
Sbjct: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVAT----- 55
Query: 59 VLDKQPPRXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXKTSAVNRCSRCRKRVGLTGFR 118
V++K+P + K + NRC CRK+VGLTGF+
Sbjct: 56 VVEKKPLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPS-NRCLSCRKKVGLTGFK 114
Query: 119 CRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
CRCG FC HRY+D H C++DYK R+ IA+ NP+V+A KI +
Sbjct: 115 CRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
>Os07g0168800 Zinc finger, A20-type domain containing protein
Length = 161
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 1 MAQRDKKDQEPTELRAPEI-TLCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXXV 59
MAQ K++ + PE LC N+CGF G+ T N+C C+ V
Sbjct: 1 MAQESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAP----V 56
Query: 60 LDKQPPRXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXKTSAVNRCSRCRKRVGLTGFRC 119
++K+ NRC CRK+VGLTGF+C
Sbjct: 57 VEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQC 116
Query: 120 RCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
RCG FC HRY++ H C++DYK A RD IA+ NPVV A KI +
Sbjct: 117 RCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
>Os05g0299700 Similar to Expressed protein (Zinc finger-like protein)
Length = 174
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 53/63 (84%)
Query: 102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
VNRC+ CRKRVGLTGFRCRCG LFC HR+S+ H CS+DYK+A R+ IAR NPV+RAAKI
Sbjct: 112 VNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKI 171
Query: 162 VRF 164
++
Sbjct: 172 IKI 174
>Os06g0612800 Similar to PVPR3 protein
Length = 171
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 21 LCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXXV--------LDKQPP----RXX 68
LC N+CGF G+ AT N+C C + K+P
Sbjct: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEV 75
Query: 69 XXXXXXXXXXXXXXXXMXXXXXXXXXXXXKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGE 128
+ NRCS CRKRVGLTGF CRCG+L+C
Sbjct: 76 AVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAM 135
Query: 129 HRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
HRYSD+H C +DY++AARDAIA+ NPVV+A K+ +
Sbjct: 136 HRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
>Os02g0195600 Zinc finger, A20-type domain containing protein
Length = 173
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 21 LCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXXV------LDKQPPRXXXXXXXX 74
LC N+CGF G+ AT N+C C + D
Sbjct: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGST 75
Query: 75 XXXXXXXXXXMXXXXXXXXXXXXKTSAV--------NRCSRCRKRVGLTGFRCRCGHLFC 126
+ AV NRC+ CRKRVGLTGF CRCG+++C
Sbjct: 76 AVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYC 135
Query: 127 GEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
HRYSD+H C +DY++AARDAIA+ NPVV+A K+ +
Sbjct: 136 ALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
>Os03g0793000 Zinc finger, A20-type domain containing protein
Length = 169
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Query: 1 MAQRDKK--DQEPTELRAPEITLCANSCGFPGNPATQNLCQNCFXXXXXXXXXXXXXXXX 58
MA +K D E +C CGF G+ AT N+C C+
Sbjct: 1 MASMKRKCPDDETACGSGAGAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAA 60
Query: 59 VLDKQ--PPRXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXKTSAVNRCSRCRKRVGLTG 116
D + +A NRC+ CRK+VGLTG
Sbjct: 61 NSDLELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTG 120
Query: 117 FRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIV 162
F+CRCG FCG HR++D HGC +DYKSA ++ IA+ NP+V A K+
Sbjct: 121 FKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKLA 166
>Os03g0793300 Similar to Expressed protein (Zinc finger-like protein)
Length = 237
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
NRC+ CR++VGLTGF+CRCG FCG HRY+D HGC +DYKS+ R+ IA+ NPVV A K+
Sbjct: 174 ANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233
Query: 162 V 162
Sbjct: 234 A 234
>Os01g0765900
Length = 165
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 7/157 (4%)
Query: 13 ELRAPEITLCANSCGFPGNPATQNLC-----QNCFXXXXXXXXXXXXXXXXVLDKQPPRX 67
+ A + LCA+ CGF GNPAT ++C Q+C
Sbjct: 6 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATVATG 65
Query: 68 XXXXXXXXXXXXXXXXXMXXXXX--XXXXXXXKTSAVNRCSRCRKRVGLTGFRCRCGHLF 125
K + NRC+ C+K+VGL GF CRCG +
Sbjct: 66 AVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCGATY 125
Query: 126 CGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIV 162
CG HRY ++H C +D+K A+RDAIAR NP+++ K+
Sbjct: 126 CGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLT 162
>Os01g0718000 Zinc finger, A20-type domain containing protein
Length = 148
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 46/62 (74%)
Query: 103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIV 162
+RC+ C + VGL GF CRCG +FCG HRYSDRH C YDY+ A RDAIAR NPVVR K+
Sbjct: 87 SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVE 146
Query: 163 RF 164
+
Sbjct: 147 KL 148
>Os02g0530300 Zinc finger, A20-type domain containing protein
Length = 154
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
+RC+ CRKRVGLTGF CRCG FCG HRY +RH C +D+K+A RDAIAR NP+++ K+
Sbjct: 92 SRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKL 150
>Os08g0436400
Length = 224
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIV 162
NRC CRK+VGL GF CRCG FC HR++D+H C++D+K + R+ IA++NP++ A KI
Sbjct: 163 NRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKIT 222
Query: 163 RF 164
+F
Sbjct: 223 KF 224
>Os07g0169500
Length = 152
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 6/66 (9%)
Query: 99 TSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRA 158
T A NRC CRK+VGL GF CRCG +FCG H C++DYK+A R+AIAR NP+V A
Sbjct: 93 TKAKNRCKACRKKVGLLGFPCRCGGMFCGA------HACAFDYKAAGREAIARHNPLVVA 146
Query: 159 AKIVRF 164
KI +
Sbjct: 147 PKINKI 152
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,561,878
Number of extensions: 127811
Number of successful extensions: 456
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 453
Number of HSP's successfully gapped: 15
Length of query: 164
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 71
Effective length of database: 12,179,899
Effective search space: 864772829
Effective search space used: 864772829
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 152 (63.2 bits)