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Os02g0195600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, A20-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0158) R2 : 0.0262
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.116 (0.0332) R2dN8 : 0.0338 R2N8 : 0.0262
σ : 0.297
deviance : 40.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.24 0.226 13.9 0.237 0.394 -0.333 -0.788 0.99 0.0959 21.9 0.18 1560 -- --
23.64 0.226 13.9 0.291 0.4 -0.563 -0.612 -- 0.083 22 0.04569 1540 -- --
24.25 0.229 13.9 0.3 0.364 -0.0943 -- 1.11 0.133 21.2 0.181 1203 -- --
25.02 0.233 13.9 0.294 0.397 -0.562 -- -- 0.0864 22.3 0.04064 1552 -- --
28.2 0.247 13.9 0.376 -- -0.152 -- 1.51 0.0744 -- 0.01011 1064 -- --
26.21 0.24 13.9 0.456 0.339 -- -0.618 -- 0.17 21.2 -- -- -- --
27.56 0.246 13.9 0.478 0.34 -- -- -- 0.17 21.4 -- -- -- --
25.52 0.235 13.9 0.32 -- -0.704 -- -- 0.0745 -- 0.3668 2493 -- --
27.63 0.245 13.9 -- 0.395 -0.679 -- -- 0.0697 22 0.03718 1497 -- --
34.32 0.274 13.9 0.48 -- -- -- -- 0.169 -- -- -- -- --
33.58 0.271 13.9 -- 0.34 -- -- -- 0.117 21.5 -- -- -- --
28.05 0.247 13.9 -- -- -0.847 -- -- 0.0712 -- 1.169e-07 2489 -- --
40.4 0.297 13.9 -- -- -- -- -- 0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.69 wind 9 14400 > th dose dependent rect. 18 21
2 21.86 humidity 80 43200 > th dose independent rect. 20 3
4 21.96 wind 9 14400 < th dose independent rect. 18 21
5 21.99 wind 9 14400 > th dose independent rect. 18 21
7 22.05 temperature 20 90 > th dose dependent rect. 17 16
8 22.06 wind 1 43200 < th dose dependent rect. 2 1
10 22.07 wind 1 43200 < th dose dependent rect. 9 3
14 22.10 wind 1 43200 > th dose dependent rect. 13 1
18 22.13 wind 9 43200 < th dose dependent rect. 13 1
31 22.17 wind 5 43200 < th dose independent rect. 14 1
33 22.18 wind 1 43200 > th dose independent rect. 2 1
35 22.18 wind 1 43200 < th dose dependent rect. 11 1
37 22.19 humidity 80 43200 < th dose independent rect. 20 3
40 22.21 wind 5 43200 > th dose independent rect. 14 1
42 22.21 wind 7 14400 > th dose independent rect. 5 11
46 22.23 wind 1 43200 < th dose independent rect. 2 1
47 22.23 wind 1 43200 < th dose independent rect. 9 3
48 22.23 temperature 20 10 > th dose dependent sin 10 NA
56 22.24 wind 7 14400 > th dose dependent rect. 22 18
63 22.26 wind 7 14400 > th dose independent rect. 24 16
72 22.27 wind 7 14400 < th dose independent rect. 5 11
81 22.28 wind 1 43200 > th dose independent rect. 9 3
82 22.28 wind 5 43200 < th dose independent rect. 14 5
91 22.30 wind 5 43200 > th dose independent rect. 14 5
98 22.30 wind 7 14400 > th dose dependent rect. 2 14
113 22.32 wind 7 14400 > th dose independent rect. 9 7
123 22.32 wind 1 43200 < th dose dependent rect. 8 18
133 22.34 radiation 30 43200 > th dose independent rect. 9 1
143 22.34 wind 9 14400 > th dose dependent rect. 13 22
152 22.35 wind 7 14400 > th dose dependent rect. 5 10
156 22.35 wind 1 43200 < th dose dependent rect. 11 15
168 22.37 wind 1 43200 < th dose independent rect. 4 1
173 22.37 wind 7 14400 < th dose independent rect. 9 7
181 22.37 humidity 80 43200 < th dose dependent rect. 10 1
183 22.37 wind 7 14400 > th dose dependent rect. 24 21
195 22.38 wind 7 14400 > th dose dependent rect. 5 16
196 22.38 wind 7 14400 > th dose dependent rect. 3 18
208 22.39 wind 9 14400 > th dose dependent rect. 13 19
217 22.40 wind 9 14400 > th dose dependent rect. 13 17
219 22.40 humidity 80 43200 < th dose dependent rect. 19 18
221 22.41 wind 7 14400 > th dose independent sin 1 NA
235 22.41 wind 9 14400 > th dose dependent rect. 13 12
236 22.41 wind 9 14400 > th dose dependent rect. 13 15
239 22.42 wind 5 43200 < th dose independent rect. 16 1
245 22.42 wind 1 43200 < th dose dependent rect. 24 1
305 22.45 humidity 80 43200 < th dose dependent rect. 1 12
311 22.45 wind 7 14400 > th dose dependent rect. 5 20
313 22.46 wind 7 14400 < th dose independent sin 0 NA
327 22.46 wind 7 14400 > th dose dependent rect. 9 12
343 22.47 wind 7 14400 > th dose independent rect. 5 16
350 22.47 humidity 80 43200 < th dose dependent sin 7 NA
373 22.48 wind 3 43200 > th dose independent rect. 11 4
383 22.48 wind 1 43200 < th dose dependent rect. 4 1
385 22.48 wind 5 14400 > th dose dependent rect. 9 7
396 22.48 wind 7 14400 > th dose dependent rect. 9 23
412 22.49 wind 9 14400 > th dose independent rect. 13 21
451 22.50 wind 9 14400 < th dose independent rect. 13 21
452 22.50 wind 7 14400 > th dose dependent no NA NA
459 22.50 wind 7 14400 > th dose dependent rect. 9 16
470 22.51 wind 7 14400 > th dose independent rect. 9 12
477 22.51 wind 7 14400 > th dose dependent sin 0 NA
481 22.51 humidity 80 43200 < th dose dependent rect. 20 1
483 22.51 humidity 80 43200 < th dose dependent rect. 19 3
508 22.51 wind 7 14400 > th dose dependent rect. 7 23
531 22.52 wind 7 14400 > th dose dependent sin 22 NA
587 22.53 humidity 80 43200 < th dose dependent rect. 19 10
608 22.54 humidity 70 43200 < th dose independent rect. 1 13
611 22.54 wind 9 14400 > th dose independent rect. 13 18
628 22.54 temperature 20 720 > th dose dependent rect. 15 10
651 22.55 humidity 70 43200 < th dose independent sin 6 NA
652 22.55 wind 9 14400 < th dose independent rect. 13 2
654 22.55 humidity 70 43200 < th dose independent rect. 2 11
655 22.55 wind 7 14400 < th dose independent rect. 9 12
664 22.55 wind 7 14400 > th dose dependent rect. 13 2
692 22.56 wind 1 43200 > th dose independent rect. 24 1
698 22.56 wind 3 43200 > th dose independent rect. 9 7
704 22.56 humidity 70 43200 > th dose independent rect. 2 11
713 22.56 wind 9 14400 < th dose independent rect. 13 17
715 22.56 humidity 70 43200 < th dose independent rect. 19 18
750 22.57 wind 1 43200 < th dose independent rect. 24 1
757 22.57 humidity 70 43200 > th dose independent rect. 2 9
764 22.57 wind 9 14400 > th dose independent rect. 13 12
768 22.57 wind 9 14400 > th dose independent rect. 13 15
796 22.58 radiation 30 43200 < th dose independent rect. 9 1
798 22.58 wind 3 43200 < th dose independent rect. 9 7
814 22.58 humidity 80 43200 > th dose independent rect. 19 14
835 22.59 wind 9 14400 < th dose independent rect. 13 8
848 22.59 wind 9 14400 < th dose independent rect. 13 15
849 22.59 humidity 80 43200 < th dose independent rect. 19 15
855 22.59 wind 7 14400 > th dose independent rect. 5 20
895 22.60 wind 9 14400 < th dose independent rect. 13 12
911 22.60 humidity 70 43200 > th dose independent rect. 19 18
920 22.60 radiation 40 43200 < th dose dependent rect. 10 1
963 22.61 radiation 20 43200 > th dose dependent rect. 9 1