BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0195600 Os02g0195600|AK067403
(173 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51200.1 | chr1:18985690-18986211 FORWARD LENGTH=174 163 3e-41
AT2G36320.1 | chr2:15229388-15229873 FORWARD LENGTH=162 139 6e-34
AT1G12440.1 | chr1:4241816-4242322 REVERSE LENGTH=169 128 2e-30
AT3G52800.1 | chr3:19569806-19570318 FORWARD LENGTH=171 128 2e-30
AT4G12040.1 | chr4:7215341-7215868 FORWARD LENGTH=176 127 2e-30
AT2G27580.1 | chr2:11776640-11777131 REVERSE LENGTH=164 126 6e-30
AT4G22820.1 | chr4:11987871-11988401 REVERSE LENGTH=177 112 9e-26
AT3G12630.1 | chr3:4012707-4013189 FORWARD LENGTH=161 103 7e-23
AT4G14225.1 | chr4:8198777-8199202 FORWARD LENGTH=126 97 6e-21
AT4G25380.1 | chr4:12975936-12976328 REVERSE LENGTH=131 84 4e-17
>AT1G51200.1 | chr1:18985690-18986211 FORWARD LENGTH=174
Length = 173
Score = 163 bits (413), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 1 MEHKEAGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVN 59
M+H + GCQ P EGP LC NNCGFFGSAATMNMCSKCHK+M+ ++EQ AS++ +
Sbjct: 1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSS 60
Query: 60 GCDGGKEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVK-EGPNRCATCR 118
+ KE E T+ VQP+ V +E VA K +GP+RC TC
Sbjct: 61 SSNIIKETFTAALVDIETKSV--EPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 118
Query: 119 KRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
KRVGLTGF CRCG+++C HRY+D H+C F+Y AA++AIAKANPVVKAEKLDKI
Sbjct: 119 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
>AT2G36320.1 | chr2:15229388-15229873 FORWARD LENGTH=162
Length = 161
Score = 139 bits (351), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 98/170 (57%), Gaps = 11/170 (6%)
Query: 4 KEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDG 63
+E C+ PEG LC+NNCGFFGS+ATMN+CS C+ ++ +K++Q S+++S ++
Sbjct: 3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIA 62
Query: 64 GKEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGL 123
E K + + PT+ P + PNRC CRKRVGL
Sbjct: 63 PVLENYAAELEIPTTKKTEEKKPIQI-PTE----------QPSPPQRPNRCTVCRKRVGL 111
Query: 124 TGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
TGF CRCG +C HRY + H C FD+++A R+ IAKANP+V A KL KI
Sbjct: 112 TGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161
>AT1G12440.1 | chr1:4241816-4242322 REVERSE LENGTH=169
Length = 168
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 2 EHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGC 61
E ++ P P LC+ CGFFGS + MN+CSKC++++ EEQ A ++++ +N
Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLN-- 61
Query: 62 DGGKEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVP--KVKEGPNRCATCRK 119
L + + + A P K RC +C K
Sbjct: 62 -------PNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNK 114
Query: 120 RVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
+VG+TGF CRCG+ +C HRY + HECQFD++ AR+AIAKANPVVKA+K+D+I
Sbjct: 115 KVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168
>AT3G52800.1 | chr3:19569806-19570318 FORWARD LENGTH=171
Length = 170
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
Query: 4 KEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDG 63
+E CQ PE LC+NNCGF GS+ATMN+CS C+ ++ +K++Q + S
Sbjct: 3 EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVE------- 55
Query: 64 GKEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVV--PKVKEG----PNRCATC 117
L+ P+ E+ AV+ P ++ PNRC TC
Sbjct: 56 -SSLSVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTC 114
Query: 118 RKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
RKRVGLTGF CRCG M+C +HRY + H C +D+++A R+ IAKANP+VKA KL KI
Sbjct: 115 RKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170
>AT4G12040.1 | chr4:7215341-7215868 FORWARD LENGTH=176
Length = 175
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 98/169 (57%), Gaps = 12/169 (7%)
Query: 11 PEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVN--GCD---GGK 65
P P LC N CGFFGS + MN+CSKC++ + +E+Q +A +++ + + C G+
Sbjct: 13 PTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQ 72
Query: 66 EHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPN-RCATCRKRVGLT 124
+H E + +P+ V +E+ P PN RC +C K+VG+
Sbjct: 73 KH------PLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVM 126
Query: 125 GFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
GF C+CG+ +C HRY +KHEC FD++ RDAIAKANP+VKA+K+ +I
Sbjct: 127 GFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175
>AT2G27580.1 | chr2:11776640-11777131 REVERSE LENGTH=164
Length = 163
Score = 126 bits (316), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 94/162 (58%), Gaps = 10/162 (6%)
Query: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXX 73
P LC NNCGFFGS AT N+CSKC +++ +E+ + A ++ +
Sbjct: 10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLA-----AVGAAASSS 64
Query: 74 XXXXXXXXXEAKTLVVQPTD--VAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCG 131
++K +V ++ A EE P + P RC TCR+RVG+TGF CRCG
Sbjct: 65 VSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPP---QDPKRCLTCRRRVGITGFRCRCG 121
Query: 132 NMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
++C HRY+++HEC FD++ +D IAKANP+VKA+KL+KI
Sbjct: 122 FVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163
>AT4G22820.1 | chr4:11987871-11988401 REVERSE LENGTH=177
Length = 176
Score = 112 bits (280), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 10 QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIX 69
Q P LC+ CGFFGS + M++CSKC++ + +E Q +A ++++ +
Sbjct: 15 QASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFK--PSPPRSLF 72
Query: 70 XXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCR 129
E +VV + + ++ A P NRC C K+VG+ GF C+
Sbjct: 73 IAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCK 132
Query: 130 CGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
CG+ +C HRY + H+C FD++ R IAKANPVVKA+K+ +
Sbjct: 133 CGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQRF 176
>AT3G12630.1 | chr3:4012707-4013189 FORWARD LENGTH=161
Length = 160
Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 22/152 (14%)
Query: 22 GFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXXXXXXXXXX 81
G + AT NMC KC S+V+ G E
Sbjct: 31 GVTANPATNNMCQKCFNA----------------SLVSAAAGVVESGSILKRSARSVNLR 74
Query: 82 XEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYS 141
+V++P ++ AV + ++ NRC+ CRK+VGLTGF CRCG ++C+ HRYS
Sbjct: 75 SSPAKVVIRPREID------AVKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYS 128
Query: 142 DKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
D+H+C +DY+TA R+AIA+ NPVVKA K+ K+
Sbjct: 129 DRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160
>AT4G14225.1 | chr4:8198777-8199202 FORWARD LENGTH=126
Length = 125
Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 39/160 (24%)
Query: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXX 73
P LCI CGFF ++ T N+CSKC+ + + E LA ++++
Sbjct: 5 PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESARYLATFNVNT----------------- 47
Query: 74 XXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNM 133
A+ + Q V G+ A C+K+VGL GF+CRCG++
Sbjct: 48 --------KAAEEVTAQEATVLGSKGGCA--------------CKKKVGLLGFHCRCGHL 85
Query: 134 YCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
+ A HRY ++H C DY++AA D +AK NPVVK +KL ++
Sbjct: 86 FFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125
>AT4G25380.1 | chr4:12975936-12976328 REVERSE LENGTH=131
Length = 130
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 36/159 (22%)
Query: 15 ILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXXX 74
+ C CG +G+ N+CS C+K+ +++ A +
Sbjct: 8 LPCEGGCGLYGTRVNNNLCSLCYKKSVLQHSPALRFEPETE------------------- 48
Query: 75 XXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMY 134
++ PT+ EE VK+ RC C+++VG+ GF CRCG+M+
Sbjct: 49 ----------QSQCCPPTNSPAVEEE-----PVKK--RRCGICKRKVGMLGFKCRCGHMF 91
Query: 135 CALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
C HRY ++H C FDY+ + R A+A P+++A+KL +
Sbjct: 92 CGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQRF 130
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.132 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,532,524
Number of extensions: 121602
Number of successful extensions: 350
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 342
Number of HSP's successfully gapped: 10
Length of query: 173
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 81
Effective length of database: 8,584,297
Effective search space: 695328057
Effective search space used: 695328057
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)