BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0195600 Os02g0195600|AK067403
(173 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0195600 Zinc finger, A20-type domain containing protein 329 7e-91
Os06g0612800 Similar to PVPR3 protein 285 1e-77
Os03g0792900 Similar to PVPR3 protein 138 2e-33
Os07g0168800 Zinc finger, A20-type domain containing protein 133 8e-32
Os01g0718000 Zinc finger, A20-type domain containing protein 112 9e-26
Os01g0765900 112 2e-25
Os09g0486500 Multiple stress-responsive zinc-finger protein... 110 4e-25
Os03g0793000 Zinc finger, A20-type domain containing protein 108 2e-24
Os02g0530300 Zinc finger, A20-type domain containing protein 107 4e-24
Os08g0504700 Similar to Multiple stress-responsive zinc-fin... 103 6e-23
Os05g0299700 Similar to Expressed protein (Zinc finger-like... 96 1e-20
Os08g0436400 94 4e-20
Os03g0793300 Similar to Expressed protein (Zinc finger-like... 91 4e-19
Os07g0169500 89 1e-18
>Os02g0195600 Zinc finger, A20-type domain containing protein
Length = 173
Score = 329 bits (843), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 159/173 (91%), Positives = 159/173 (91%)
Query: 1 MEHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNG 60
MEHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNG
Sbjct: 1 MEHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNG 60
Query: 61 CDGGKEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKR 120
CDGGKEHI EAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKR
Sbjct: 61 CDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKR 120
Query: 121 VGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
VGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 121 VGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
>Os06g0612800 Similar to PVPR3 protein
Length = 171
Score = 285 bits (729), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/173 (80%), Positives = 147/173 (84%), Gaps = 2/173 (1%)
Query: 1 MEHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNG 60
MEHKE GCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMK+EQAKLAASSIDSIVNG
Sbjct: 1 MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG 60
Query: 61 CDGGKEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKR 120
D GKE I E KTLV QP ++AG SE V V PK +EGPNRC+TCRKR
Sbjct: 61 GDSGKEPIIAGHAEVAVAQV--EVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKR 118
Query: 121 VGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
VGLTGFNCRCGN+YCA+HRYSDKH+CQFDYRTAARDAIAKANPVVKAEKLDKI
Sbjct: 119 VGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
>Os03g0792900 Similar to PVPR3 protein
Length = 160
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 100/178 (56%), Gaps = 32/178 (17%)
Query: 2 EHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGC 61
E +E G PE PILC+NNCGFFGS T NMCSKC+++ + +AK A+ ++
Sbjct: 9 EAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATVVEK----- 59
Query: 62 DGGKEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKV------KEGPNRCA 115
+ LV + TD G S VA +V K NRC
Sbjct: 60 ---------------KPLASLSSTPLVTEVTD--GGSGSVADGKQVMEEDTPKPPSNRCL 102
Query: 116 TCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
+CRK+VGLTGF CRCG +C++HRY+D H+C FDY+ R+ IAK NP+VKA+K+ KI
Sbjct: 103 SCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
>Os07g0168800 Zinc finger, A20-type domain containing protein
Length = 161
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 26/173 (15%)
Query: 5 EAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGG 64
E PE PILC+NNCGFFGS+ T NMCSKC+++ + + +AA ++
Sbjct: 11 EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEK-------- 59
Query: 65 KEHIXXXXXXXXXXXXXXEAKTLV--VQPTDV--AGTSEEVAVVPKVKEGPNRCATCRKR 120
+KT + +P +V A ++ A K NRC +CRK+
Sbjct: 60 -----------KAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKK 108
Query: 121 VGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
VGLTGF CRCG +C+ HRY++ H+C FDY+ A RD IAK NPVV AEK++KI
Sbjct: 109 VGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
>Os01g0718000 Zinc finger, A20-type domain containing protein
Length = 148
Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 30/163 (18%)
Query: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXX 73
P+ C N CGFFGSA T +CSKC+++ +M + A AA+
Sbjct: 13 PLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQS------------------- 53
Query: 74 XXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGP---NRCATCRKRVGLTGFNCRC 130
E +V+ + E P + G +RCA C + VGL GF CRC
Sbjct: 54 --------AEHDQVVLPAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRC 105
Query: 131 GNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
G ++C HRYSD+H+C +DYR A RDAIA+ANPVV+ +K++K+
Sbjct: 106 GAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148
>Os01g0765900
Length = 165
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXX 73
P+LC + CGF+G+ AT++MCS C+++ + L +++ + G
Sbjct: 12 PVLCASGCGFYGNPATLDMCSVCYRQHCL------LNGATMAT-------GPSSSVAAAS 58
Query: 74 XXXXXXXXXEAKTLVVQPTDVAGTS------EEVAVVPKVKEGPNRCATCRKRVGLTGFN 127
+ + V +V G + E A V + K NRCA+C+K+VGL GF
Sbjct: 59 AATVATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFA 118
Query: 128 CRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKL 170
CRCG YC HRY +KH C FD++ A+RDAIA+ANP++K EKL
Sbjct: 119 CRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 161
>Os09g0486500 Multiple stress-responsive zinc-finger protein ISAP1 (Stress-
associated protein 1) (OsISAP1)
Length = 164
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXXXX 75
LC N+CGF G+ AT N+C C + +S +++
Sbjct: 21 LCANSCGFPGNPATQNLCQNC---FLAATASTSSPSSLSSPVLDKQPPRPAAPLVEPQAP 77
Query: 76 XXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYC 135
A L P VA TS AV NRC+ CRKRVGLTGF CRCG+++C
Sbjct: 78 LPPPVEEMASALATAPAPVAKTS---AV--------NRCSRCRKRVGLTGFRCRCGHLFC 126
Query: 136 ALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
HRYSD+H C +DY++AARDAIA+ NPVV+A K+ +
Sbjct: 127 GEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
>Os03g0793000 Zinc finger, A20-type domain containing protein
Length = 169
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 5 EAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGG 64
E C G +C+ CGFFGS AT NMCS+C++E + + AA++ +
Sbjct: 12 ETACGSGAGAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDL------- 64
Query: 65 KEHIXXXXXXXXXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLT 124
+V + ++ K PNRCA CRK+VGLT
Sbjct: 65 -----ELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLT 119
Query: 125 GFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKL 170
GF CRCG +C HR++D H C FDY++A ++ IAK NP+V A+KL
Sbjct: 120 GFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKL 165
>Os02g0530300 Zinc finger, A20-type domain containing protein
Length = 154
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 88/159 (55%), Gaps = 19/159 (11%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXXXX 75
LC NNCGFFGS AT+++CSKC+++ +E A + ++ S
Sbjct: 14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACP---------------A 58
Query: 76 XXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYC 135
+ P+ T+ E VV +RCA+CRKRVGLTGF CRCG +C
Sbjct: 59 THPSSPSSSSCPAFLPSS---TAAEAGVVVAAVAKASRCASCRKRVGLTGFACRCGGTFC 115
Query: 136 ALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKL-DKI 173
HRY ++H C FD++ A RDAIA+ANP++K +KL DKI
Sbjct: 116 GAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
>Os08g0504700 Similar to Multiple stress-responsive zinc-finger protein ISAP1
(Stress- associated protein 1) (OsISAP1)
Length = 170
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXXXX 75
LC N+CGF G+ AT N+C C + AAS + + +
Sbjct: 21 LCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASPSTTSLPVFP-----VVEKPRQA 75
Query: 76 XXXXXXXEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYC 135
+V +PT AG E + NRC +CR+RVGLTGF CRCG +YC
Sbjct: 76 VQSSAAAAVALVVERPT--AGPVESSSKA-SRSSSVNRCHSCRRRVGLTGFRCRCGELYC 132
Query: 136 ALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
HRYSD+H+C FDY++AARDAIA+ NPVV+A K+ +
Sbjct: 133 GAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVRF 170
>Os05g0299700 Similar to Expressed protein (Zinc finger-like protein)
Length = 174
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%)
Query: 112 NRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLD 171
NRC CRKRVGLTGF CRCG ++C HR+S+ HEC FDY+TA R+ IA+ANPV++A K+
Sbjct: 113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKII 172
Query: 172 KI 173
KI
Sbjct: 173 KI 174
>Os08g0436400
Length = 224
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 33/168 (19%)
Query: 16 LCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXXXX 75
LC + CGFFGS T NMCSKC+++ +K ++SS + + D
Sbjct: 80 LCSSGCGFFGSKETNNMCSKCYRDH-LKATSPLFSSSSSPATASTTD------------- 125
Query: 76 XXXXXXXEAKTLVVQPTDVAGTSE----------EVAVVPKVKEGPNRCATCRKRVGLTG 125
T+ + P A T + PNRC CRK+VGL G
Sbjct: 126 ---------ITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLG 176
Query: 126 FNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
F CRCG +C+ HR++DKH C FD++ + R+ IAK NP++ A K+ K
Sbjct: 177 FECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKITKF 224
>Os03g0793300 Similar to Expressed protein (Zinc finger-like protein)
Length = 237
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 48/59 (81%)
Query: 112 NRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKL 170
NRCATCR++VGLTGF CRCG +C HRY+D+H C FDY+++ R+ IAK NPVV A+KL
Sbjct: 175 NRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233
>Os07g0169500
Length = 152
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 26/153 (16%)
Query: 23 FFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIXXXXXXXXXXXXXX 82
FFGSAAT +CSKC+K+ + + + ++ DS
Sbjct: 24 FFGSAATDGLCSKCYKQQ-QPQPRHLIGTAAGDS-----------------DKTSLKVVA 65
Query: 83 EAKTLVVQPTDVAGTSEEVAVVP--KVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRY 140
+ TLV++ G + P V + NRC CRK+VGL GF CRCG M+C
Sbjct: 66 DLSTLVIKDNSGVGGEGTTVMAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCG---- 121
Query: 141 SDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
H C FDY+ A R+AIA+ NP+V A K++KI
Sbjct: 122 --AHACAFDYKAAGREAIARHNPLVVAPKINKI 152
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,543,906
Number of extensions: 190178
Number of successful extensions: 422
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 417
Number of HSP's successfully gapped: 14
Length of query: 173
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 79
Effective length of database: 12,127,685
Effective search space: 958087115
Effective search space used: 958087115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 152 (63.2 bits)