Os01g0718000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, A20-type domain containing protein.
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Os01g0718000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, A20-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.59 | 0.499 | 9.12 | -0.901 | 0.251 | -1.92 | -0.194 | 0.825 | -0.558 | 2.57 | 28.9 | 11 | -- | -- |
| 113.2 | 0.496 | 9.11 | -0.758 | 0.26 | -1.96 | 0.173 | -- | -0.524 | 1.85 | 28.75 | 8 | -- | -- |
| 112.66 | 0.494 | 9.12 | -0.875 | 0.247 | -1.93 | -- | 0.687 | -0.549 | 2.24 | 28.9 | 10 | -- | -- |
| 113.3 | 0.496 | 9.11 | -0.759 | 0.257 | -1.94 | -- | -- | -0.523 | 2.18 | 28.74 | 8 | -- | -- |
| 115.14 | 0.5 | 9.11 | -0.81 | -- | -1.7 | -- | 0.681 | -0.505 | -- | 28.5 | 9 | -- | -- |
| 166.14 | 0.604 | 9.02 | -0.29 | 0.383 | -- | 0.0724 | -- | -0.122 | 14.2 | -- | -- | -- | -- |
| 166.16 | 0.604 | 9.01 | -0.288 | 0.382 | -- | -- | -- | -0.121 | 14.1 | -- | -- | -- | -- |
| 115.85 | 0.501 | 9.1 | -0.697 | -- | -1.71 | -- | -- | -0.48 | -- | 28.35 | 10 | -- | -- |
| 126.76 | 0.527 | 9.07 | -- | 0.139 | -1.63 | -- | -- | -0.379 | 1.94 | 28.68 | 7 | -- | -- |
| 174.91 | 0.618 | 9.02 | -0.304 | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
| 168.34 | 0.607 | 9.01 | -- | 0.388 | -- | -- | -- | -0.0891 | 14.1 | -- | -- | -- | -- |
| 127.57 | 0.528 | 9.07 | -- | -- | -1.51 | -- | -- | -0.359 | -- | 28.48 | 4 | -- | -- |
| 177.34 | 0.622 | 9.01 | -- | -- | -- | -- | -- | -0.0965 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 4 | 108.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 6 | 109.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 8 | 109.61 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 10 | 109.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 31 | 112.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 37 | 112.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 44 | 112.87 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 55 | 113.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 60 | 113.60 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 67 | 113.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 69 | 113.94 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 70 | 113.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 83 | 114.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 102 | 115.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 110 | 115.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 115 | 115.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 138 | 116.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 187 | 118.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 197 | 118.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 293 | 120.39 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 296 | 120.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 328 | 120.91 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 366 | 121.37 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 394 | 121.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 395 | 121.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 414 | 121.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 433 | 122.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 443 | 122.22 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 486 | 122.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 599 | 123.60 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 10 |
| 610 | 123.67 | temperature | 15 | 270 | > th | dose dependent | sin | 13 | NA |
| 641 | 123.99 | temperature | 20 | 720 | > th | dose independent | rect. | 7 | 18 |
| 680 | 124.22 | temperature | 15 | 90 | > th | dose dependent | sin | 10 | NA |
| 754 | 124.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 760 | 124.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 767 | 124.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 866 | 125.27 | temperature | 10 | 10 | > th | dose dependent | sin | 15 | NA |
| 872 | 125.28 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 884 | 125.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 907 | 125.43 | temperature | 30 | 90 | < th | dose dependent | sin | 10 | NA |
| 910 | 125.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 920 | 125.49 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 982 | 125.69 | wind | 3 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 986 | 125.71 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 988 | 125.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 21 |