BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0718000 Os01g0718000|AK111476
(148 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0718000 Zinc finger, A20-type domain containing protein 270 4e-73
Os06g0612800 Similar to PVPR3 protein 117 4e-27
Os07g0168800 Zinc finger, A20-type domain containing protein 117 4e-27
Os02g0195600 Zinc finger, A20-type domain containing protein 113 4e-26
Os03g0792900 Similar to PVPR3 protein 111 2e-25
Os01g0765900 108 2e-24
Os02g0530300 Zinc finger, A20-type domain containing protein 102 8e-23
Os09g0486500 Multiple stress-responsive zinc-finger protein... 102 1e-22
Os08g0436400 98 3e-21
Os07g0169500 96 7e-21
Os08g0504700 Similar to Multiple stress-responsive zinc-fin... 94 3e-20
Os03g0793000 Zinc finger, A20-type domain containing protein 94 5e-20
Os03g0793300 Similar to Expressed protein (Zinc finger-like... 86 1e-17
Os05g0299700 Similar to Expressed protein (Zinc finger-like... 83 6e-17
>Os01g0718000 Zinc finger, A20-type domain containing protein
Length = 148
Score = 270 bits (689), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/148 (91%), Positives = 135/148 (91%)
Query: 1 MEQGSERQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMXXXXXXXXXXXXXEHDQVV 60
MEQGSERQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVM EHDQVV
Sbjct: 1 MEQGSERQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQSAEHDQVV 60
Query: 61 LPAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHD 120
LPAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHD
Sbjct: 61 LPAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHD 120
Query: 121 CGYDYRGAGRDAIARANPVVRPDKVEKL 148
CGYDYRGAGRDAIARANPVVRPDKVEKL
Sbjct: 121 CGYDYRGAGRDAIARANPVVRPDKVEKL 148
>Os06g0612800 Similar to PVPR3 protein
Length = 171
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 28/161 (17%)
Query: 13 PLPCANGCGFFGSADTRGLCSKCYRQTVMXXXXXXXXXXXXXE---------------HD 57
P+ C N CGFFGSA T +CSKC+++ +M H
Sbjct: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHA 73
Query: 58 QVVLPAPEGVPV----------DEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGA 107
+V + E + EG P R G +RC+ C + VGL GF CRCG
Sbjct: 74 EVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGP---NRCSTCRKRVGLTGFNCRCGN 130
Query: 108 VFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148
++C HRYSD+HDC +DYR A RDAIA+ANPVV+ +K++K+
Sbjct: 131 LYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
>Os07g0168800 Zinc finger, A20-type domain containing protein
Length = 161
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 82/148 (55%), Gaps = 18/148 (12%)
Query: 13 PLPCANGCGFFGSADTRGLCSKCYRQ----TVMXXXXXXXXXXXXXEHDQVVL-PA-PEG 66
P+ C N CGFFGS+ T +CSKCYR T M + L PA P+
Sbjct: 20 PILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLEPAKPDE 79
Query: 67 VPV----DEGAM--PPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHD 120
VP D+ A PP PP + RC +C + VGL GF+CRCG FC HRY++ HD
Sbjct: 80 VPAAAVEDKQAAQEPPKPPSN------RCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHD 133
Query: 121 CGYDYRGAGRDAIARANPVVRPDKVEKL 148
C +DY+ AGRD IA+ NPVV +K+ K+
Sbjct: 134 CTFDYKKAGRDQIAKQNPVVIAEKINKI 161
>Os02g0195600 Zinc finger, A20-type domain containing protein
Length = 173
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 30/163 (18%)
Query: 13 PLPCANGCGFFGSADTRGLCSKCYRQTVMXXXX--------------------------- 45
P+ C N CGFFGSA T +CSKC+++ +M
Sbjct: 14 PILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASG 73
Query: 46 XXXXXXXXXEHDQVVLPAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRC 105
E +V+ + E P + G +RCA C + VGL GF CRC
Sbjct: 74 STAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGP---NRCATCRKRVGLTGFNCRC 130
Query: 106 GAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148
G ++C HRYSD+H+C +DYR A RDAIA+ANPVV+ +K++K+
Sbjct: 131 GNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
>Os03g0792900 Similar to PVPR3 protein
Length = 160
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 74/147 (50%), Gaps = 18/147 (12%)
Query: 13 PLPCANGCGFFGSADTRGLCSKCYRQTVMXXXXXXXXXX---XXXEHDQVVL-------- 61
P+ C N CGFFGS T +CSKCYR TV +V
Sbjct: 21 PILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPLASLSSTPLVTEVTDGGSG 80
Query: 62 PAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDC 121
+G V E P PP +RC +C + VGL GF+CRCG FC HRY+D H C
Sbjct: 81 SVADGKQVMEEDTPKPPS-------NRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKC 133
Query: 122 GYDYRGAGRDAIARANPVVRPDKVEKL 148
+DY+ GR+ IA+ NP+V+ DK+ K+
Sbjct: 134 TFDYKQVGREQIAKQNPLVKADKITKI 160
>Os01g0765900
Length = 165
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 18/161 (11%)
Query: 5 SERQDER-PPLPCANGCGFFGSADTRGLCSKCYRQTVMXXXXXXXXXXXXXEHDQVVLPA 63
SE+Q P+ CA+GCGF+G+ T +CS CYRQ +
Sbjct: 3 SEQQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATV 62
Query: 64 PEGVPVDEGAMPPPPPRHGAKTKS-----------------RCAACGRSVGLMGFECRCG 106
G + P +GA S RCA+C + VGL+GF CRCG
Sbjct: 63 ATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCG 122
Query: 107 AVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEK 147
A +CG HRY ++H CG+D++GA RDAIARANP+++ +K+
Sbjct: 123 ATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLTN 163
>Os02g0530300 Zinc finger, A20-type domain containing protein
Length = 154
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 6 ERQDERPPLPCANGCGFFGSADTRGLCSKCYR-----QTVMXXXXXXXXXXXXXEHDQVV 60
+R E CAN CGFFGS T LCSKCYR ++ H
Sbjct: 5 QRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSP 64
Query: 61 LPA--PEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDR 118
+ P +P A SRCA+C + VGL GF CRCG FCGAHRY +R
Sbjct: 65 SSSSCPAFLPSSTAAEAGVVVAA-VAKASRCASCRKRVGLTGFACRCGGTFCGAHRYPER 123
Query: 119 HDCGYDYRGAGRDAIARANPVVRPDKVE 146
H CG+D++ AGRDAIARANP+++ DK++
Sbjct: 124 HACGFDFKAAGRDAIARANPLIKGDKLK 151
>Os09g0486500 Multiple stress-responsive zinc-finger protein ISAP1 (Stress-
associated protein 1) (OsISAP1)
Length = 164
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 16 CANGCGFFGSADTRGLCSKCYRQTVMXXXXXXXXXXXXXEHDQ------VVLP-APEGVP 68
CAN CGF G+ T+ LC C+ + +V P AP P
Sbjct: 22 CANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPP 81
Query: 69 VDEGA---MPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDY 125
V+E A P P +RC+ C + VGL GF CRCG +FCG HRYSDRH C YDY
Sbjct: 82 VEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDY 141
Query: 126 RGAGRDAIARANPVVRPDKVEKL 148
+ A RDAIAR NPVVR K+ +
Sbjct: 142 KSAARDAIARDNPVVRAAKIVRF 164
>Os08g0436400
Length = 224
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 19/148 (12%)
Query: 16 CANGCGFFGSADTRGLCSKCYRQTVMXXXXXXXXXXXXXEHDQVVLPAPEGVPVDEGAMP 75
C++GCGFFGS +T +CSKCYR + + VP+
Sbjct: 81 CSSGCGFFGSKETNNMCSKCYRDHLKATSPLFSSSSSPATASTTDIT----VPIAPATTA 136
Query: 76 PPPPRHGAKTK---------------SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHD 120
P P G + + +RC AC + VGL+GFECRCG FC HR++D+H
Sbjct: 137 PTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHA 196
Query: 121 CGYDYRGAGRDAIARANPVVRPDKVEKL 148
C +D++ + R+ IA+ NP++ K+ K
Sbjct: 197 CTFDFKKSDREKIAKENPLIVAPKITKF 224
>Os07g0169500
Length = 152
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 22 FFGSADTRGLCSKCYRQT---------VMXXXXXXXXXXXXXEHDQVVLPAPEGVPVDEG 72
FFGSA T GLCSKCY+Q + +V+ GV EG
Sbjct: 24 FFGSAATDGLCSKCYKQQQPQPRHLIGTAAGDSDKTSLKVVADLSTLVIKDNSGVG-GEG 82
Query: 73 AMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDA 132
PP K K+RC AC + VGL+GF CRCG +FCGAH C +DY+ AGR+A
Sbjct: 83 TTVMAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREA 136
Query: 133 IARANPVVRPDKVEKL 148
IAR NP+V K+ K+
Sbjct: 137 IARHNPLVVAPKINKI 152
>Os08g0504700 Similar to Multiple stress-responsive zinc-finger protein ISAP1
(Stress- associated protein 1) (OsISAP1)
Length = 170
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 16 CANGCGFFGSADTRGLCSKCYRQTV---------------------MXXXXXXXXXXXXX 54
CAN CGF G+ T LC C+ +
Sbjct: 22 CANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASPSTTSLPVFPVVEKPRQAVQSSAA 81
Query: 55 EHDQVVLPAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHR 114
+V+ P PV+ + + + +RC +C R VGL GF CRCG ++CGAHR
Sbjct: 82 AAVALVVERPTAGPVESSSK-----ASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHR 136
Query: 115 YSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148
YSDRHDC +DY+ A RDAIAR NPVVR K+ +
Sbjct: 137 YSDRHDCSFDYKSAARDAIARENPVVRAAKIVRF 170
>Os03g0793000 Zinc finger, A20-type domain containing protein
Length = 169
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 16 CANGCGFFGSADTRGLCSKCYRQTVMXXXXXXXXXXXXXEHDQVVLPAPEGVPV------ 69
C GCGFFGS T +CS+CYR+ + + V +
Sbjct: 24 CVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDLELVGVAETTTKKARMSAVV 83
Query: 70 ------DEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGY 123
A P A +RCAAC + VGL GF+CRCG FCG HR++D H CG+
Sbjct: 84 PVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRHADAHGCGF 143
Query: 124 DYRGAGRDAIARANPVVRPDKV 145
DY+ AG++ IA+ NP+V DK+
Sbjct: 144 DYKSAGKEQIAKQNPLVVADKL 165
>Os03g0793300 Similar to Expressed protein (Zinc finger-like protein)
Length = 237
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 87 SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKV 145
+RCA C R VGL GF+CRCG FCG HRY+D H CG+DY+ +GR+ IA+ NPVV DK+
Sbjct: 175 NRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233
>Os05g0299700 Similar to Expressed protein (Zinc finger-like protein)
Length = 174
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 87 SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVE 146
+RC C + VGL GF CRCG +FC HR+S+ H+C +DY+ AGR+ IARANPV+R K+
Sbjct: 113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKII 172
Query: 147 KL 148
K+
Sbjct: 173 KI 174
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.140 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,689,122
Number of extensions: 293691
Number of successful extensions: 2504
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2500
Number of HSP's successfully gapped: 14
Length of query: 148
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 56
Effective length of database: 12,232,113
Effective search space: 684998328
Effective search space used: 684998328
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 151 (62.8 bits)