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Os09g0486500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Multiple stress-responsive zinc-finger protein ISAP1 (Stress- associated protein 1) (OsISAP1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0338) R2 : 0.827
β1 : -0.832 (0.126) R2dD : 0.0179 R2D : 0.035
β2 : 1.37 (0.123) R2dC : 0.112 R2C : 0.415
β3 : -3.2 (0.159) R2dE : 0.368 R2E : 0.693
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.278 (0.0721) R2dN8 : 0.00754 R2N8 : 0.00346
σ : 0.63
deviance : 183.26
__
_____
C
peak time of C : 11.2
E
wheather : radiation
threshold : 35.89
memory length : 1441
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 21
open length of G : 8.02

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
172.92 0.618 11.6 -0.838 1.35 -3.33 0.15 -1.95 -0.275 11.1 34.28 1442 21 8.02
178.34 0.622 11.6 -0.706 1.33 -3.29 1.22 -- -0.269 10.8 37.15 1441 21 8.02
174.42 0.615 11.6 -0.764 1.48 -3.16 -- -1.6 -0.264 11.1 35.1 1441 21 8.02
183.26 0.63 11.6 -0.832 1.37 -3.2 -- -- -0.278 11.2 35.89 1441 21 8.02
232.98 0.711 11.6 -1.12 -- -3.19 -- -1.15 -0.308 -- 126.7 1441 21 8.03
305.62 0.82 11.6 -1.32 3.32 -- 1.22 -- -0.332 12.1 -- -- -- --
312.11 0.827 11.6 -1.27 3.32 -- -- -- -0.326 12.1 -- -- -- --
234.5 0.713 11.6 -1.08 -- -3.63 -- -- -0.297 -- 79.48 1441 21 8.03
197.06 0.654 11.6 -- 1.36 -3.76 -- -- -0.15 11 26.04 1441 20.9 8.06
1004.21 1.48 11.6 -1.38 -- -- -- -- -0.375 -- -- -- -- --
354.64 0.881 11.5 -- 3.33 -- -- -- -0.185 12.2 -- -- -- --
252.76 0.74 11.6 -- -- -3.97 -- -- -0.161 -- 57.17 1441 20.9 8.07
1054.19 1.52 11.6 -- -- -- -- -- -0.223 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 176.74 radiation 40.0 1440 < th dose dependent rect. 21 8
7 186.14 temperature 10.0 90 > th dose dependent rect. 20 8
8 188.09 radiation 10.0 1440 < th dose independent rect. 21 8
10 191.75 wind 5.0 90 < th dose independent rect. 20 8
13 193.57 temperature 10.0 1440 > th dose independent rect. 21 8
16 193.57 temperature 30.0 1440 < th dose independent rect. 21 8
20 193.57 humidity 50.0 1440 > th dose independent rect. 21 8
26 193.57 atmosphere 995.0 1440 > th dose independent rect. 21 8
39 193.57 temperature 10.0 1440 > th dose independent rect. 5 16
47 197.18 temperature 10.0 90 > th dose independent rect. 20 8
48 197.18 temperature 30.0 90 < th dose independent rect. 20 8
49 197.18 humidity 50.0 90 > th dose independent rect. 20 8
52 197.18 atmosphere 995.0 90 > th dose independent rect. 20 8
53 197.18 radiation 1.0 90 < th dose independent rect. 20 8
58 197.18 temperature 10.0 90 > th dose independent rect. 4 16
59 197.18 atmosphere 1015.0 90 < th dose independent rect. 4 16
60 197.18 radiation 1.0 90 < th dose dependent rect. 20 8
65 197.94 wind 9.0 90 < th dose independent rect. 4 16
68 198.28 precipitation 0.1 90 < th dose independent rect. 20 8
69 198.28 precipitation 0.1 90 < th dose dependent rect. 20 8
75 201.87 precipitation 0.1 90 < th dose independent rect. 4 16
76 201.87 precipitation 0.1 90 < th dose dependent rect. 4 16
85 205.62 wind 9.0 90 < th dose dependent rect. 20 8
90 206.59 atmosphere 1015.0 90 < th dose independent rect. 20 8
92 207.01 wind 7.0 270 < th dose independent rect. 18 9
95 209.42 radiation 1.0 10 < th dose dependent rect. 20 9
96 209.50 radiation 1.0 30 < th dose dependent rect. 20 12
107 209.92 humidity 50.0 90 > th dose dependent rect. 20 8
109 210.20 atmosphere 995.0 270 > th dose independent rect. 6 9
110 210.23 radiation 40.0 90 < th dose independent rect. 4 16
154 211.18 radiation 40.0 270 < th dose independent rect. 15 15
158 211.43 wind 1.0 90 > th dose independent rect. 20 8
160 211.53 wind 1.0 30 > th dose independent rect. 4 16
165 211.74 temperature 10.0 270 > th dose independent rect. 6 9
166 211.74 atmosphere 1015.0 270 < th dose independent rect. 6 9
167 211.74 temperature 10.0 270 > th dose independent rect. 15 15
202 212.79 precipitation 0.1 270 < th dose independent rect. 6 9
203 212.79 precipitation 0.1 270 < th dose dependent rect. 6 9
204 212.86 radiation 40.0 90 < th dose dependent rect. 4 16
207 213.14 wind 9.0 270 < th dose independent rect. 6 9
211 213.19 atmosphere 995.0 90 > th dose independent rect. 4 16
220 213.55 radiation 10.0 270 < th dose dependent rect. 18 9
221 213.59 radiation 40.0 10 < th dose dependent rect. 5 15
227 213.69 precipitation 0.1 270 < th dose independent rect. 15 15
229 213.69 precipitation 0.1 270 < th dose dependent rect. 15 15
232 213.84 radiation 10.0 270 < th dose independent rect. 18 9
233 213.86 temperature 10.0 270 > th dose independent rect. 18 9
234 213.86 humidity 50.0 270 > th dose independent rect. 18 9
246 213.96 radiation 1.0 30 < th dose independent rect. 20 12
274 214.63 wind 9.0 270 < th dose independent rect. 15 15
309 215.20 radiation 40.0 30 < th dose dependent rect. 14 6
336 215.90 wind 9.0 270 < th dose independent rect. 14 17
399 216.79 temperature 10.0 90 > th dose dependent rect. 20 19
413 217.18 wind 1.0 270 > th dose independent rect. 13 7
458 217.57 radiation 1.0 270 > th dose independent rect. 7 7
464 217.84 atmosphere 995.0 90 > th dose independent rect. 20 19
465 217.93 wind 1.0 90 > th dose independent rect. 15 5
469 218.01 radiation 40.0 90 < th dose independent rect. 15 5
479 218.33 wind 9.0 270 < th dose dependent rect. 18 8
483 218.44 temperature 10.0 90 > th dose independent rect. 15 5
485 218.44 atmosphere 1010.0 90 < th dose independent rect. 15 5
488 218.44 temperature 10.0 90 > th dose independent rect. 20 19
497 218.81 radiation 20.0 90 < th dose independent rect. 15 5
498 218.85 wind 9.0 90 < th dose independent rect. 20 19
499 218.89 wind 9.0 90 < th dose independent rect. 15 5
503 219.00 temperature 10.0 270 > th dose independent rect. 13 7
504 219.00 atmosphere 1015.0 270 < th dose independent rect. 13 7
505 219.00 temperature 10.0 270 > th dose independent rect. 20 17
506 219.00 atmosphere 995.0 270 > th dose independent rect. 20 17
509 219.06 wind 9.0 270 < th dose independent rect. 20 17
518 219.24 radiation 20.0 90 < th dose independent rect. 4 16
525 219.48 radiation 40.0 30 < th dose dependent rect. 12 8
551 219.98 wind 1.0 270 > th dose independent rect. 7 7
554 220.07 precipitation 0.1 270 < th dose independent rect. 13 7
555 220.07 precipitation 0.1 270 < th dose dependent rect. 13 7
556 220.08 atmosphere 995.0 270 > th dose independent rect. 15 16
565 220.40 wind 9.0 270 < th dose independent rect. 13 7
596 220.94 precipitation 0.1 90 < th dose independent rect. 20 19
597 220.94 precipitation 0.1 90 < th dose dependent rect. 20 19
615 221.27 radiation 40.0 270 < th dose independent rect. 15 3
638 221.67 precipitation 0.1 270 < th dose independent rect. 1 7
639 221.67 precipitation 0.1 270 < th dose dependent rect. 1 7
644 221.68 temperature 10.0 270 > th dose independent rect. 18 21
655 221.80 radiation 20.0 270 < th dose independent rect. 1 7
656 221.80 wind 9.0 270 < th dose independent rect. 18 21
660 221.84 temperature 10.0 1440 > th dose independent rect. 17 4
663 221.84 radiation 30.0 1440 < th dose independent rect. 17 4
669 221.84 temperature 10.0 1440 > th dose independent rect. 21 20
684 222.06 precipitation 0.1 270 < th dose independent rect. 20 17
686 222.06 precipitation 0.1 270 < th dose dependent rect. 20 17
736 222.23 precipitation 0.1 270 < th dose independent rect. 14 5
737 222.23 precipitation 0.1 270 < th dose dependent rect. 14 5
741 222.29 humidity 50.0 270 > th dose independent rect. 7 7
752 222.54 atmosphere 995.0 270 > th dose independent rect. 18 21
766 222.72 wind 9.0 270 < th dose independent rect. 8 17
768 222.75 humidity 70.0 270 > th dose independent rect. 1 7
775 222.79 radiation 20.0 10 < th dose independent rect. 5 15
800 223.10 atmosphere 1015.0 90 < th dose independent rect. 20 19
811 223.28 temperature 10.0 270 > th dose independent rect. 1 7
813 223.28 temperature 30.0 270 < th dose independent rect. 1 7
814 223.28 humidity 50.0 270 > th dose independent rect. 1 7
816 223.28 atmosphere 995.0 270 > th dose independent rect. 1 7
817 223.28 atmosphere 1015.0 270 < th dose independent rect. 1 7
818 223.28 temperature 10.0 270 > th dose independent rect. 8 17
824 223.35 wind 9.0 270 < th dose independent rect. 1 7
846 223.74 precipitation 0.1 270 < th dose independent rect. 15 3
847 223.74 precipitation 0.1 270 < th dose dependent rect. 15 3
855 223.92 temperature 10.0 270 > th dose dependent rect. 20 17
857 223.96 humidity 50.0 270 > th dose independent rect. 20 17
858 223.96 radiation 40.0 270 < th dose dependent rect. 1 8
883 224.36 atmosphere 995.0 270 > th dose independent rect. 2 17
935 224.82 atmosphere 1015.0 270 < th dose independent rect. 20 17
974 225.26 precipitation 0.1 10 < th dose independent rect. 16 4
976 225.26 precipitation 0.1 10 < th dose dependent rect. 16 4
982 225.31 precipitation 0.1 270 < th dose independent rect. 8 17
983 225.31 precipitation 0.1 270 < th dose dependent rect. 8 17